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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911504
Clone id YMU001_000005_G03
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000005_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCAGGGAATGTCGTCTGCCACAAACTTCGTGGATGCGATGGCTGCCTTTGCTTTCAGTTT
GACCACATTTTTCCTTTTACCAAAGGTGGAGAAACGGATGTGAAAAATTGTCAAATCTTG
CAATCGCGAGTTAATCAATACAAAGGAGACAAAGAACATGTTGGAAAAGAGGAGCTTGAG
CAATCTTCTTGTAACCTCAAGTTCACAGACAAGGAGCTGGATGTAATTGAAATGGCTGTT
TATGGAGACGTGATCCGACCAGGTCTTTAGTGCAAGTGTAATAGCATTGGAGAGGCCTTA
GGCATTGCTGTTAAGGCCAAAGGTCCGGTCATAACATCTTGCAAACTTCCATACCAAAAA
GTGGATTAGTCTGAGCCCTGGTGACAAGATCGGAAGAACAAAAAAGCTGGAGGGGAACCA
TTAAAGTATCAATTGGTTCAAGTCTCTGTATATCTGAAATGTACTTTCATGATGGTTGAA
ATTTTTCTTATTTTCTTTGATTAATGTATACAAAAACAATACCTATAAGCGATGCACGAT
TGTTCTTAAGTTGAT
■■Homology search results ■■ -
sp_hit_id P47510
Definition sp|P47510|Y268_MYCGE Uncharacterized protein MG268 OS=Mycoplasma genitalium
Align length 60
Score (bit) 30.8
E-value 4.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911504|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_G03.
         (555 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P47510|Y268_MYCGE Uncharacterized protein MG268 OS=Mycoplasma...    31   4.7  
sp|Q93Z24|BGL17_ARATH Beta-galactosidase 17 OS=Arabidopsis thali...    31   4.7  
sp|Q680Q4|SIZ1_ARATH E3 SUMO-protein ligase SIZ1 OS=Arabidopsis ...    30   6.1  
sp|A8FJF8|RSMG_BACP2 Ribosomal RNA small subunit methyltransfera...    30   6.1  
sp|P21332|O16G_BACCE Oligo-1,6-glucosidase OS=Bacillus cereus GN...    30   8.0  

>sp|P47510|Y268_MYCGE Uncharacterized protein MG268 OS=Mycoplasma
           genitalium GN=MG268 PE=4 SV=1
          Length = 228

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = -1

Query: 240 NSHFNYIQL--LVCELEVTRRLLKLLFSNMFFVSFVLINSRLQDLTIFHIRFSTFGKRKN 67
           N+  N+IQ   +VCELE   +L++LL + M+  S  L+ S L  L   +   + FGK +N
Sbjct: 32  NTLANHIQAAKVVCELETNDQLVELLLAKMYERSDELLYSPLFQL---YFTLNRFGKYQN 88


>sp|Q93Z24|BGL17_ARATH Beta-galactosidase 17 OS=Arabidopsis thaliana
           GN=BGAL17 PE=2 SV=1
          Length = 697

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
 Frame = +1

Query: 58  FDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVG---KEELEQSSCNLKFTDKELDVI 228
           +D+  P  + G+ D    Q LQ  + +Y      +    K+     S  ++ T    D++
Sbjct: 369 YDYDAPIKESGDIDNPKFQALQRVIKKYNASPHPISPSNKQRKAYGSIKMQMTTSLFDLV 428

Query: 229 EMAVYGDVIRPGL*CKCNSIGEALG 303
            M    DVI         S+G+  G
Sbjct: 429 RMTDPADVITSANPISMESVGQMFG 453


>sp|Q680Q4|SIZ1_ARATH E3 SUMO-protein ligase SIZ1 OS=Arabidopsis
           thaliana GN=SIZ1 PE=1 SV=2
          Length = 884

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +1

Query: 142 KGDKEHVGKEELEQSSCNLKFTDKELDVIEMAVYGDVIRPGL*CKCNSI--GEALGIAVK 315
           + DK+ + K E +  +  +   DK L  ++   Y D+   G+  +  +   G+ LG+  +
Sbjct: 210 RADKDLLAKPEYDVQAWCMLLNDKVLFRMQWPQYADLQVNGVPVRAINRPGGQLLGVNGR 269

Query: 316 AKGPVITSC 342
             GP+ITSC
Sbjct: 270 DDGPIITSC 278


>sp|A8FJF8|RSMG_BACP2 Ribosomal RNA small subunit methyltransferase
           G OS=Bacillus pumilus (strain SAFR-032) GN=rsmG PE=3
           SV=1
          Length = 239

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -1

Query: 249 VSINSHFNYIQLLVCELEVTRRLLKLLFSNMFFVSFVLINSRLQDLTIFHIRFSTFGKRK 70
           +   + F  I L +C   +   ++  L   + F++ +     LQD T +H R  TFG+RK
Sbjct: 76  IGAGAGFPSIPLKICFPHLHVTIVDSLQKRITFLNELAKGLNLQDTTFYHDRAETFGQRK 135


>sp|P21332|O16G_BACCE Oligo-1,6-glucosidase OS=Bacillus cereus
           GN=malL PE=1 SV=1
          Length = 558

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +1

Query: 46  LCFQFDHI-FPFTKGGETDVKNCQILQSRVNQYKGDK--EHVGKEEL 177
           + FQF+H+     +GG+ DVK C +L  + N  K  K  EH G   L
Sbjct: 277 MVFQFEHMDLDSGEGGKWDVKPCSLLTLKENLTKWQKALEHTGWNSL 323
tr_hit_id A9RNN2
Definition tr|A9RNN2|A9RNN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 119
Score (bit) 165.0
E-value 2.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911504|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_G03.
         (555 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNN2|A9RNN2_PHYPA Predicted protein OS=Physcomitrella paten...   165   2e-39
tr|A9NLU3|A9NLU3_PICSI Putative uncharacterized protein OS=Picea...   164   3e-39
tr|A9NR05|A9NR05_PICSI Putative uncharacterized protein OS=Picea...   162   1e-38
tr|A7PDH7|A7PDH7_VITVI Chromosome chr17 scaffold_12, whole genom...   150   3e-35
tr|B8BG96|B8BG96_ORYSI Putative uncharacterized protein OS=Oryza...   150   4e-35
tr|A9P7V3|A9P7V3_POPTR Putative uncharacterized protein OS=Popul...   149   1e-34
tr|Q8LMG0|Q8LMG0_ORYSJ Os10g0335200 protein OS=Oryza sativa subs...   148   2e-34
tr|B6U703|B6U703_MAIZE Endonuclease/ nucleic acid binding protei...   144   2e-33
tr|Q9M9T9|Q9M9T9_ARATH F6A14.21 protein (Putative uncharacterize...   142   9e-33
tr|A0D8G5|A0D8G5_PARTE Chromosome undetermined scaffold_41, whol...   100   7e-20
tr|A0CV00|A0CV00_PARTE Chromosome undetermined scaffold_29, whol...    98   3e-19
tr|Q8S7W2|Q8S7W2_ORYSJ Os03g0169800 protein OS=Oryza sativa subs...    95   2e-18
tr|B8APB0|B8APB0_ORYSI Putative uncharacterized protein OS=Oryza...    95   2e-18
tr|Q9SN88|Q9SN88_ARATH Putative uncharacterized protein F1P2.40 ...    94   4e-18
tr|A7PDL1|A7PDL1_VITVI Chromosome chr17 scaffold_12, whole genom...    92   1e-17
tr|A9TDM2|A9TDM2_PHYPA Predicted protein (Fragment) OS=Physcomit...    89   1e-16
tr|A9P2M7|A9P2M7_PICSI Putative uncharacterized protein OS=Picea...    84   7e-15
tr|B6TQA0|B6TQA0_MAIZE Putative uncharacterized protein OS=Zea m...    79   1e-13
tr|A3AEJ9|A3AEJ9_ORYSJ Putative uncharacterized protein OS=Oryza...    62   3e-08
tr|Q7XK33|Q7XK33_ORYSJ OSJNBa0044K18.12 protein OS=Oryza sativa ...    49   1e-04
tr|A2XUN6|A2XUN6_ORYSI Putative uncharacterized protein OS=Oryza...    49   1e-04
tr|Q3EAN6|Q3EAN6_ARATH Uncharacterized protein At3g47490.2 OS=Ar...    43   0.010
tr|B1BM47|B1BM47_CLOPE Type III restriction enzyme, res subunit ...    42   0.017
tr|Q0RPY1|Q0RPY1_FRAAA Tellurium resistance protein terE OS=Fran...    41   0.050
tr|Q07GQ1|Q07GQ1_ROSDO OSJNBa0044K18.12 OS=Roseobacter denitrifi...    40   0.11 
tr|B6G1B2|B6G1B2_9CLOT Putative uncharacterized protein OS=Clost...    40   0.11 
tr|A5CAA9|A5CAA9_VITVI Putative uncharacterized protein OS=Vitis...    39   0.14 
tr|Q3MB91|Q3MB91_ANAVT Type III restriction enzyme, res subunit ...    39   0.19 
tr|A9B2D5|A9B2D5_HERA2 HNH endonuclease OS=Herpetosiphon auranti...    39   0.25 
tr|A6PK73|A6PK73_9BACT HNH endonuclease OS=Victivallis vadensis ...    37   0.55 

>tr|A9RNN2|A9RNN2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_204249 PE=4 SV=1
          Length = 180

 Score =  165 bits (417), Expect = 2e-39
 Identities = 73/119 (61%), Positives = 97/119 (81%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1   AGNVVCHKLRGCDGCLCFQFDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVGKEELE 180
           AGN+VC +L  C+GCLC+++DH+ PF+KGG+T V NCQILQSRVN+ K ++  +  ++L+
Sbjct: 58  AGNIVCRRLTRCEGCLCYEYDHVRPFSKGGQTTVDNCQILQSRVNRMKSNRSDLASDDLK 117

Query: 181 QSSCNLKFTDKELDVIEMAVYGDVIRPGL*CKCNSIGEALGIAV-KAKGPVITSCKLPY 354
           Q SC+LKFTDKELD+IEM VYG+VIRPGL CKC S+ E LG A+ K KGP ++SCKLP+
Sbjct: 118 QFSCDLKFTDKELDLIEMGVYGNVIRPGLQCKCKSVAETLGTALSKQKGPEMSSCKLPH 176


>tr|A9NLU3|A9NLU3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 166

 Score =  164 bits (415), Expect = 3e-39
 Identities = 76/120 (63%), Positives = 99/120 (82%)
 Frame = +1

Query: 1   AGNVVCHKLRGCDGCLCFQFDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVGKEELE 180
           AGN+VC +   CDGCLC+++DHI PF+KGGET V+NCQILQSRVN+ KG+K+ + K  LE
Sbjct: 48  AGNIVCRRFWHCDGCLCYEYDHIIPFSKGGETTVENCQILQSRVNRSKGNKDQLDKTVLE 107

Query: 181 QSSCNLKFTDKELDVIEMAVYGDVIRPGL*CKCNSIGEALGIAVKAKGPVITSCKLPYQK 360
           Q SC+LKFTDKELDVIEMAVYG+V+RPGL C+C S+ E LG  +K+K P + +C+LPY++
Sbjct: 108 QYSCDLKFTDKELDVIEMAVYGNVMRPGLQCRCKSVAEMLG-QLKSKSPQM-ACELPYKE 165


>tr|A9NR05|A9NR05_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 168

 Score =  162 bits (409), Expect = 1e-38
 Identities = 73/120 (60%), Positives = 99/120 (82%)
 Frame = +1

Query: 1   AGNVVCHKLRGCDGCLCFQFDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVGKEELE 180
           AGN++C +   C+GCLC+++DHI PF+KGGET V+NCQILQSRVN+ KG+K+ + +  LE
Sbjct: 50  AGNIICRRFGHCEGCLCYEYDHIIPFSKGGETTVENCQILQSRVNRSKGNKDQLNRTVLE 109

Query: 181 QSSCNLKFTDKELDVIEMAVYGDVIRPGL*CKCNSIGEALGIAVKAKGPVITSCKLPYQK 360
           Q SC+LKFTDKELDVIEMAVYG+V+RPGL C+C S+ E LG  +K+K P + +C+LPY++
Sbjct: 110 QYSCDLKFTDKELDVIEMAVYGNVMRPGLQCRCKSVAEMLG-QLKSKSPQM-ACELPYKE 167


>tr|A7PDH7|A7PDH7_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016286001
           PE=4 SV=1
          Length = 167

 Score =  150 bits (380), Expect = 3e-35
 Identities = 69/118 (58%), Positives = 92/118 (77%)
 Frame = +1

Query: 1   AGNVVCHKLRGCDGCLCFQFDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVGKEELE 180
           AGN+VC +   C GCLCF++DHI PF+KGGE+  +NCQILQ+RVN++K DK++V K +L+
Sbjct: 47  AGNIVCKRFCNCQGCLCFEYDHIIPFSKGGESVPENCQILQTRVNRFKSDKDNVDKTQLQ 106

Query: 181 QSSCNLKFTDKELDVIEMAVYGDVIRPGL*CKCNSIGEALGIAVKAKGPVITSCKLPY 354
             SC++KFTDKELD+IEMAVYGDVIRPG  C+C ++ E LG   K K   + +CKLP+
Sbjct: 107 GYSCDVKFTDKELDIIEMAVYGDVIRPGNQCRCRTVAEMLG-QYKPKDR-MAACKLPF 162


>tr|B8BG96|B8BG96_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_33113 PE=4 SV=1
          Length = 178

 Score =  150 bits (379), Expect = 4e-35
 Identities = 70/118 (59%), Positives = 91/118 (77%)
 Frame = +1

Query: 1   AGNVVCHKLRGCDGCLCFQFDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVGKEELE 180
           AGNVVC +   C GCLC+++DHI PF+KGGE+ V NCQILQ+RVN+ K DK  + + E++
Sbjct: 59  AGNVVCRRFWSCHGCLCYEYDHIVPFSKGGESTVDNCQILQTRVNRSKSDKAWIEQAEMQ 118

Query: 181 QSSCNLKFTDKELDVIEMAVYGDVIRPGL*CKCNSIGEALGIAVKAKGPVITSCKLPY 354
             SC++KFTDKELDVIEMAVYGDVIRPG  C+C ++ E LG  VK+K   + +C+LPY
Sbjct: 119 GFSCDIKFTDKELDVIEMAVYGDVIRPGKQCRCRTVAEMLG-KVKSKNQ-MAACELPY 174


>tr|A9P7V3|A9P7V3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 180

 Score =  149 bits (375), Expect = 1e-34
 Identities = 68/118 (57%), Positives = 91/118 (77%)
 Frame = +1

Query: 1   AGNVVCHKLRGCDGCLCFQFDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVGKEELE 180
           AGN+VC +   C GCLC+++DHI PF+KGGE+ V NCQILQ+RVN++K +K+ + K +L+
Sbjct: 60  AGNIVCKRFCNCHGCLCYEYDHILPFSKGGESTVDNCQILQTRVNRFKSNKQELDKTQLK 119

Query: 181 QSSCNLKFTDKELDVIEMAVYGDVIRPGL*CKCNSIGEALGIAVKAKGPVITSCKLPY 354
             SC + FTDKELD+IEMAVYGDVIRPG  C+C +I E LG  +K+K  V  +CKLP+
Sbjct: 120 GYSCEINFTDKELDIIEMAVYGDVIRPGNQCRCRTIAEMLG-QLKSKDRV-AACKLPF 175


>tr|Q8LMG0|Q8LMG0_ORYSJ Os10g0335200 protein OS=Oryza sativa subsp.
           japonica GN=OJ1325D05.10 PE=2 SV=1
          Length = 178

 Score =  148 bits (374), Expect = 2e-34
 Identities = 69/118 (58%), Positives = 91/118 (77%)
 Frame = +1

Query: 1   AGNVVCHKLRGCDGCLCFQFDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVGKEELE 180
           AGNVVC +   C GCLC+++DHI PF+KGGE+ V NCQILQ+RVN+ K DK  + + E++
Sbjct: 59  AGNVVCRRFWSCHGCLCYEYDHIVPFSKGGESTVDNCQILQTRVNRSKSDKAWIEQAEMQ 118

Query: 181 QSSCNLKFTDKELDVIEMAVYGDVIRPGL*CKCNSIGEALGIAVKAKGPVITSCKLPY 354
             SC++KFTDKELDVIEMAVYGDVIRPG  C+C ++ E LG  VK+K   + +C+LP+
Sbjct: 119 GFSCDIKFTDKELDVIEMAVYGDVIRPGKQCRCRTVAEMLG-KVKSKNQ-MAACELPH 174


>tr|B6U703|B6U703_MAIZE Endonuclease/ nucleic acid binding protein
           OS=Zea mays PE=2 SV=1
          Length = 180

 Score =  144 bits (364), Expect = 2e-33
 Identities = 67/116 (57%), Positives = 88/116 (75%)
 Frame = +1

Query: 4   GNVVCHKLRGCDGCLCFQFDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVGKEELEQ 183
           GNVVC +  GC GCLC+++DHI PF+KGGE+ V+NCQILQ+RVN+ K DK  V + E++ 
Sbjct: 62  GNVVCRRFWGCHGCLCYEYDHIVPFSKGGESTVENCQILQTRVNRSKSDKAWVAQAEMQG 121

Query: 184 SSCNLKFTDKELDVIEMAVYGDVIRPGL*CKCNSIGEALGIAVKAKGPVITSCKLP 351
            SC++ FTDKELD+IEMAVYGDVIRPG  C+C ++ E LG  VK     + +C+LP
Sbjct: 122 FSCDIMFTDKELDIIEMAVYGDVIRPGKQCRCRTVAEVLG-QVKPTNR-MAACELP 175


>tr|Q9M9T9|Q9M9T9_ARATH F6A14.21 protein (Putative uncharacterized
           protein At1g18680) (Putative uncharacterized protein
           At1g18680/F6A14_21) OS=Arabidopsis thaliana
           GN=At1g18680/F6A14_21 PE=2 SV=1
          Length = 186

 Score =  142 bits (359), Expect = 9e-33
 Identities = 64/117 (54%), Positives = 87/117 (74%)
 Frame = +1

Query: 1   AGNVVCHKLRGCDGCLCFQFDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVGKEELE 180
           AGN+VC +   C+GCLCF++DHI P++KGGE+  +NCQILQ+RVN++K  +E+V    L+
Sbjct: 71  AGNIVCKRFGNCNGCLCFEYDHIVPYSKGGESIAENCQILQTRVNRFKSAQENVDATTLK 130

Query: 181 QSSCNLKFTDKELDVIEMAVYGDVIRPGL*CKCNSIGEALGIAVKAKGPVITSCKLP 351
             SC L+FTDKELDVIEMAVYGDV+RPG  C+C ++ E LG +    G    +C+LP
Sbjct: 131 SYSCGLQFTDKELDVIEMAVYGDVLRPGKECRCKTVAELLGQSKSKDGK--AACELP 185


>tr|A0D8G5|A0D8G5_PARTE Chromosome undetermined scaffold_41, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00014278001 PE=4 SV=1
          Length = 139

 Score =  100 bits (248), Expect = 7e-20
 Identities = 46/81 (56%), Positives = 58/81 (71%)
 Frame = +1

Query: 4   GNVVCHKLRGCDGCLCFQFDHIFPFTKGGETDVKNCQILQSRVNQYKGDKEHVGKEELEQ 183
           GN VC  L  C G LC+QFDHI P++KGGE+  KNCQ+LQS VN YK +KE++ K+EL+Q
Sbjct: 59  GNPVCKALNACRGPLCYQFDHIVPYSKGGESISKNCQLLQSFVNIYKSNKENISKDELKQ 118

Query: 184 SSCNLKFTDKELDVIEMAVYG 246
            S  L FT +  D IE A+YG
Sbjct: 119 VSPQLNFTSEVFDAIEYAIYG 139