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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911506
Clone id YMU001_000005_G05
Library
Length 298
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000005_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATGTGGCCACCTCATAATAATGGAATTGCTCGCTGCTGATTGCTACCCAAAACTGATGTT
TCATAGCCCATTCACTTCAATGCAAGATCACTGCATGAGAGATTGTCGGCAACAGGAATC
CAAATCTCCAGTGAGAGTCCACTCCAAGAAACATAATCAATGCCTTCAATTCTACTGAAT
GCTCATGAAGTAGTACATACTCTCGACTACTGTTACCAAACTTAATTGTATCCTTCTCCA
TAAGTTCATAGTATCGCTGAGACTCAATTCGTTCTCCATTTATGAAGGTGCCATTTGG
■■Homology search results ■■ -
sp_hit_id Q8BIZ6
Definition sp|Q8BIZ6|SNIP1_MOUSE Smad nuclear-interacting protein 1 OS=Mus musculus
Align length 40
Score (bit) 67.0
E-value 3.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911506|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_G05.
         (298 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8BIZ6|SNIP1_MOUSE Smad nuclear-interacting protein 1 OS=Mus ...    67   3e-11
sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo...    67   3e-11
sp|Q80U49|K0284_MOUSE Protein KIAA0284 OS=Mus musculus GN=Kiaa02...    40   0.005
sp|Q9Y4F5|K0284_HUMAN Protein KIAA0284 OS=Homo sapiens GN=KIAA02...    40   0.005
sp|Q498L0|K0284_XENLA Protein KIAA0284 homolog OS=Xenopus laevis...    39   0.011
sp|A0JM08|K0284_XENTR Protein KIAA0284 homolog OS=Xenopus tropic...    38   0.014
sp|Q6A065|CE170_MOUSE Centrosomal protein of 170 kDa OS=Mus musc...    31   1.7  
sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sap...    31   1.7  
sp|Q4P0K0|ATG1_USTMA Serine/threonine-protein kinase ATG1 OS=Ust...    31   2.2  
sp|Q59750|BGAL_RHIME Beta-galactosidase OS=Rhizobium meliloti GN...    30   2.9  
sp|P46012|YKI5_CAEEL Uncharacterized protein C01G6.5 OS=Caenorha...    30   3.8  
sp|Q03154|ACY1_HUMAN Aminoacylase-1 OS=Homo sapiens GN=ACY1 PE=1...    29   6.5  
sp|Q1RHU4|PYRG_RICBR CTP synthase OS=Rickettsia bellii (strain R...    29   8.4  
sp|Q9BWU0|NADAP_HUMAN Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=...    29   8.4  
sp|Q5RFB0|ACY1_PONAB Aminoacylase-1 OS=Pongo abelii GN=ACY1 PE=2...    29   8.4  

>sp|Q8BIZ6|SNIP1_MOUSE Smad nuclear-interacting protein 1 OS=Mus
           musculus GN=Snip1 PE=1 SV=1
          Length = 383

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHS 176
           NGTF+N +RIE QRYYEL EKD +KFG SSREYVLLHE S
Sbjct: 322 NGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHESS 361


>sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo
           sapiens GN=SNIP1 PE=1 SV=1
          Length = 396

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHS 176
           NGTF+N +RIE QRYYEL EKD +KFG SSREYVLLHE S
Sbjct: 335 NGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHESS 374


>sp|Q80U49|K0284_MOUSE Protein KIAA0284 OS=Mus musculus GN=Kiaa0284
           PE=1 SV=2
          Length = 1574

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLH-EHSVELKAL 158
           NGTF+N  RI  Q+Y  L   D I+FG  S  YVL   +H V  +AL
Sbjct: 64  NGTFVNDVRIPDQKYITLKLNDVIRFGYDSNMYVLERVQHRVPEEAL 110


>sp|Q9Y4F5|K0284_HUMAN Protein KIAA0284 OS=Homo sapiens GN=KIAA0284
           PE=1 SV=4
          Length = 1589

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLH-EHSVELKAL 158
           NGTF+N  RI  Q+Y  L   D I+FG  S  YVL   +H V  +AL
Sbjct: 64  NGTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVLERVQHRVPEEAL 110


>sp|Q498L0|K0284_XENLA Protein KIAA0284 homolog OS=Xenopus laevis
           PE=2 SV=1
          Length = 1610

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLH-EHSVELKAL 158
           NGTFIN  RI  Q+Y  L   D I+FG     YVL   +H V  +AL
Sbjct: 64  NGTFINDVRIPDQKYITLKLNDNIRFGYDINTYVLEQIQHQVPEEAL 110


>sp|A0JM08|K0284_XENTR Protein KIAA0284 homolog OS=Xenopus
           tropicalis PE=2 SV=1
          Length = 1628

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLH-EHSVELKAL 158
           NGTF+N  RI  Q+Y  L   D I+FG     YVL   +H V  +AL
Sbjct: 64  NGTFVNDVRIPDQKYITLKLSDNIRFGYDINTYVLEQIQHQVPEEAL 110


>sp|Q6A065|CE170_MOUSE Centrosomal protein of 170 kDa OS=Mus
           musculus GN=Cep170 PE=2 SV=2
          Length = 1588

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLL 188
           NGTF+N  RI  Q Y  L  +D ++FG  +  + ++
Sbjct: 64  NGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 99


>sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo
           sapiens GN=CEP170 PE=1 SV=1
          Length = 1584

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLL 188
           NGTF+N  RI  Q Y  L  +D ++FG  +  + ++
Sbjct: 64  NGTFVNDVRIPEQTYITLKLEDKLRFGYDTNLFTVV 99


>sp|Q4P0K0|ATG1_USTMA Serine/threonine-protein kinase ATG1
           OS=Ustilago maydis GN=ATG1 PE=3 SV=1
          Length = 990

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
 Frame = -1

Query: 298 PNGTFINGERIESQRYYELMEKDTIKFGNSS--------REYVLLHEHSVELKALIMFLG 143
           P G+ ++GER E+       +  T  FG+S         +EYVL+ + SVE+ AL   L 
Sbjct: 471 PEGSLLSGERDEAP------QATTEHFGSSKGGEDSFLGKEYVLIEKQSVEVNALADELA 524

Query: 142 VDSHWRFG 119
                R G
Sbjct: 525 ASPQSRLG 532


>sp|Q59750|BGAL_RHIME Beta-galactosidase OS=Rhizobium meliloti
           GN=lacZ PE=1 SV=1
          Length = 755

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 9/30 (30%), Positives = 23/30 (76%)
 Frame = -3

Query: 164 GIDYVSWSGLSLEIWIPVADNLSCSDLALK 75
           GIDY++++G+  ++W+ V D +S +++ ++
Sbjct: 132 GIDYLTYAGIYRDVWLKVTDPVSIANIKIE 161
tr_hit_id B4FBW8
Definition tr|B4FBW8|B4FBW8_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 42
Score (bit) 77.4
E-value 3.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911506|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_G05.
         (298 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4FBW8|B4FBW8_MAIZE Putative uncharacterized protein OS=Zea m...    77   3e-13
tr|Q6L5A3|Q6L5A3_ORYSJ Os05g0546600 protein OS=Oryza sativa subs...    73   6e-12
tr|A9RPJ3|A9RPJ3_PHYPA Predicted protein (Fragment) OS=Physcomit...    70   5e-11
tr|Q8W4D8|Q8W4D8_ARATH Putative uncharacterized protein At3g2056...    69   1e-10
tr|B4L589|B4L589_DROMO GI21565 OS=Drosophila mojavensis GN=GI215...    69   1e-10
tr|B4ISP5|B4ISP5_DROYA GE15240 OS=Drosophila yakuba GN=GE15240 P...    68   3e-10
tr|B3NYA0|B3NYA0_DROER GG19762 OS=Drosophila erecta GN=GG19762 P...    68   3e-10
tr|A8J191|A8J191_CHLRE Predicted protein OS=Chlamydomonas reinha...    67   3e-10
tr|B4NBU2|B4NBU2_DROWI GK25724 OS=Drosophila willistoni GN=GK257...    67   3e-10
tr|B4M7Z8|B4M7Z8_DROVI GJ16691 OS=Drosophila virilis GN=GJ16691 ...    67   3e-10
tr|B3MYH9|B3MYH9_DROAN GF22145 OS=Drosophila ananassae GN=GF2214...    67   3e-10
tr|Q5M9G6|Q5M9G6_RAT Smad nuclear interacting protein 1 OS=Rattu...    67   4e-10
tr|B1ASC5|B1ASC5_MOUSE Smad nuclear interacting protein 1 OS=Mus...    67   4e-10
tr|B5DLV7|B5DLV7_DROPS GA27539 OS=Drosophila pseudoobscura pseud...    67   4e-10
tr|B4DLV6|B4DLV6_HUMAN cDNA FLJ57163, moderately similar to Smad...    67   4e-10
tr|B4DDK7|B4DDK7_HUMAN cDNA FLJ51792, highly similar to Smad nuc...    67   4e-10
tr|B1AK66|B1AK66_HUMAN Smad nuclear interacting protein 1 OS=Hom...    67   4e-10
tr|Q4V8W8|Q4V8W8_DANRE Smad nuclear interacting protein OS=Danio...    66   7e-10
tr|Q9W5Q1|Q9W5Q1_DROME CG17168 OS=Drosophila melanogaster GN=CG1...    66   7e-10
tr|B4NUW3|B4NUW3_DROSI GD15469 OS=Drosophila simulans GN=GD15469...    66   7e-10
tr|Q6PBD3|Q6PBD3_XENTR Smad nuclear interacting protein 1 (OTTXE...    65   2e-09
tr|Q6DE04|Q6DE04_XENLA MGC81042 protein OS=Xenopus laevis GN=sni...    65   2e-09
tr|Q6DDL6|Q6DDL6_XENLA MGC83354 protein OS=Xenopus laevis GN=MGC...    65   2e-09
tr|B4DUU3|B4DUU3_HUMAN cDNA FLJ57162, highly similar to Smad nuc...    64   3e-09
tr|B3RUM0|B3RUM0_TRIAD Putative uncharacterized protein (Fragmen...    64   5e-09
tr|A7AQ65|A7AQ65_BABBO FHA domain containing protein OS=Babesia ...    64   5e-09
tr|Q16HM9|Q16HM9_AEDAE Putative uncharacterized protein OS=Aedes...    63   6e-09
tr|Q16FZ3|Q16FZ3_AEDAE Putative uncharacterized protein OS=Aedes...    63   6e-09
tr|A7SDH1|A7SDH1_NEMVE Predicted protein (Fragment) OS=Nematoste...    63   6e-09
tr|B6PUN2|B6PUN2_BRAFL Putative uncharacterized protein OS=Branc...    63   8e-09

>tr|B4FBW8|B4FBW8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 217

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHSVE 170
           NGTFING RIE +RYYEL EKDTIKFGNSSREYVLLHE+S E
Sbjct: 176 NGTFINGNRIEPRRYYELFEKDTIKFGNSSREYVLLHENSTE 217


>tr|Q6L5A3|Q6L5A3_ORYSJ Os05g0546600 protein OS=Oryza sativa subsp.
           japonica GN=OJ1345_B12.11 PE=4 SV=1
          Length = 99

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 35/42 (83%), Positives = 36/42 (85%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHSVE 170
           NGTFIN  RIE  RYYEL EKDTIKFGNSSREYVLLHE+S E
Sbjct: 58  NGTFINENRIEPSRYYELFEKDTIKFGNSSREYVLLHENSKE 99


>tr|A9RPJ3|A9RPJ3_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_117331 PE=4 SV=1
          Length = 98

 Score = 70.1 bits (170), Expect = 5e-11
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHS 176
           NGT +N  RIES+RYYEL EKDT+KFGNSSREYVLLHE+S
Sbjct: 55  NGTHLNNTRIESRRYYELREKDTLKFGNSSREYVLLHENS 94


>tr|Q8W4D8|Q8W4D8_ARATH Putative uncharacterized protein At3g20560;
           K10D20.9 (Putative uncharacterized protein At3g20560)
           OS=Arabidopsis thaliana GN=At3g20560/K10D20.9 PE=2 SV=1
          Length = 314

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 33/42 (78%), Positives = 35/42 (83%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHSVE 170
           N T+IN   IE QRYYEL EKDTIKFGNSSREYVLLHE+S E
Sbjct: 273 NKTYINESPIEPQRYYELFEKDTIKFGNSSREYVLLHENSAE 314


>tr|B4L589|B4L589_DROMO GI21565 OS=Drosophila mojavensis GN=GI21565
           PE=4 SV=1
          Length = 493

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHSVE 170
           NGTF+N ++I+S++YYELMEKD IKFG SSREYVLLHE+S E
Sbjct: 427 NGTFLNNKKIDSRKYYELMEKDVIKFGFSSREYVLLHENSKE 468


>tr|B4ISP5|B4ISP5_DROYA GE15240 OS=Drosophila yakuba GN=GE15240 PE=4
           SV=1
          Length = 422

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHSVE 170
           NGTF+N ++I++++YYELMEKD IKFG SSREYVLLHE+S E
Sbjct: 358 NGTFLNNKKIDARKYYELMEKDVIKFGFSSREYVLLHENSKE 399


>tr|B3NYA0|B3NYA0_DROER GG19762 OS=Drosophila erecta GN=GG19762 PE=4
           SV=1
          Length = 415

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHSVE 170
           NGTF+N ++I++++YYELMEKD IKFG SSREYVLLHE+S E
Sbjct: 351 NGTFLNNKKIDARKYYELMEKDVIKFGFSSREYVLLHENSKE 392


>tr|A8J191|A8J191_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_174174 PE=4 SV=1
          Length = 195

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHS 176
           NGTF+NGE++E  RYYEL+EKD ++FG SSREYVLLH+ S
Sbjct: 150 NGTFLNGEKVEPLRYYELLEKDVVRFGQSSREYVLLHDRS 189


>tr|B4NBU2|B4NBU2_DROWI GK25724 OS=Drosophila willistoni GN=GK25724
           PE=4 SV=1
          Length = 480

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHSVE 170
           NGTF+N ++I+ ++YYELMEKD IKFG SSREYVLLHE+S E
Sbjct: 416 NGTFLNNKKIDGRKYYELMEKDVIKFGFSSREYVLLHENSKE 457


>tr|B4M7Z8|B4M7Z8_DROVI GJ16691 OS=Drosophila virilis GN=GJ16691
           PE=4 SV=1
          Length = 488

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = -1

Query: 295 NGTFINGERIESQRYYELMEKDTIKFGNSSREYVLLHEHSVE 170
           NGTF+N ++I+ ++YYELMEKD IKFG SSREYVLLHE+S E
Sbjct: 420 NGTFLNNKKIDGRKYYELMEKDVIKFGFSSREYVLLHENSKE 461