BP911509
Clone id YMU001_000005_G08
Library
Length 524
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000005_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGTGGCGAGGTAGAAGCGATAATGCGGCAGATTTCAGAGCTCGTGCACAGGAAGTAAGTG
CAGGTGTGGTGAGGCTAGCCCTCAAAATCATTTTTCCAGCATCTGATGGAAATGAAAATG
TTCCAACCACGTCAACTGATCGTGAAAACATGTAAAAATAAGGAGAAAACAGGTGCAGTG
TGAGTAAGAAGCATTTGGAAGGTGTGGCATTAGAAAAGCTTTGAGCTAGCCATCAAGGAC
TGAGGCAGGGACCAGTGCCACTTTGATTTTAAATCAGAGTTCATCCTTTGCATGTCGCTT
GTCAAGTTACCCTGGGCCTTTTGCGCTGTTGTTCAATAGACGATAGATAGCGGATCATTG
CAGCTCACAACAGATAGGGTCCCTTGTGGAAAAGATACTTCTTTGTCCATGCGCATTGAC
ATGCTGTGGTCGAACACTAGGATGGATTAGTCATAGGCTATAGATGTCAGTATTCTGTAT
ACTCTCATATCATTGAAATTAACATATGTAATCGCTAAATTGAG
■■Homology search results ■■ -
sp_hit_id Q9SLI2
Definition sp|Q9SLI2|NEK1_ARATH Serine/threonine-protein kinase Nek1 OS=Arabidopsis thaliana
Align length 58
Score (bit) 30.0
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911509|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_G08.
(524 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SLI2|NEK1_ARATH Serine/threonine-protein kinase Nek1 OS=Ara... 30 7.0
sp|P28623|GUND_CLOCL Endoglucanase D OS=Clostridium cellulovoran... 30 7.0

>sp|Q9SLI2|NEK1_ARATH Serine/threonine-protein kinase Nek1
OS=Arabidopsis thaliana GN=NEK1 PE=2 SV=2
Length = 612

Score = 30.0 bits (66), Expect = 7.0
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +2

Query: 242 EAGTSATLILNQSSSFACRLSSYPGPFALLFNRR*I-----ADHCSSQQIGSLVEKIL 400
E+ + TLI Q SS AC++S YP + + +RR + +DH G KI+
Sbjct: 342 ESSSKGTLICKQVSSSACKVSKYPLAKSSVTSRRIMETGRRSDHLHPVSGGGTTSKII 399


>sp|P28623|GUND_CLOCL Endoglucanase D OS=Clostridium cellulovorans
GN=engD PE=1 SV=1
Length = 515

Score = 30.0 bits (66), Expect = 7.0
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -2

Query: 187 LLTLHLFSPYFYMFSRSVDVVGTFSFPSDAGKMIL 83
+++LH++SPYF+ ++D+ GT S+ SD K L
Sbjct: 251 IVSLHMYSPYFF----AMDINGTSSWGSDYDKSSL 281


tr_hit_id Q70VZ5
Definition tr|Q70VZ5|Q70VZ5_CIOIN Protein Wnt (Fragment) OS=Ciona intestinalis
Align length 88
Score (bit) 33.9
E-value 5.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911509|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_G08.
(524 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q70VZ5|Q70VZ5_CIOIN Protein Wnt (Fragment) OS=Ciona intestina... 34 5.1

>tr|Q70VZ5|Q70VZ5_CIOIN Protein Wnt (Fragment) OS=Ciona intestinalis
GN=wnt3 PE=2 SV=1
Length = 456

Score = 33.9 bits (76), Expect = 5.1
Identities = 23/88 (26%), Positives = 37/88 (42%)
Frame = +2

Query: 56 KCRCGEASPQNHFSSI*WK*KCSNHVN*S*KHVKIRRKQVQCE*EAFGRCGIRKALS*PS 235
KC+C S F + W N+V K + ++ K ++ E R + P+
Sbjct: 277 KCKCHGVSGSCQFRTCLWALPHFNNVGSELKQMYVKAKNMRVERHLETRGIAESLVPGPT 336

Query: 236 RTEAGTSATLILNQSSSFACRLSSYPGP 319
T+ L+ Q+S C LS+Y GP
Sbjct: 337 TLRPPTTNDLVYYQASHDYCELSAYKGP 364