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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911512
Clone id YMU001_000005_G11
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000005_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTACTGCAAGAATTAAAAATCAATTGCCTTTCTAGCATTCTTTCATATAATT
AGCCATAAAATTGGCTGGTGCTAACAACACTTAGCTAAGATTTGAAAGCGTGAAGGTAAA
AACAAGCCCACAAGCCTAGAGACTAGAAACCAAGAGTATAACAGAGCGAGAGCTTGATAC
CAATGGCTTGGTATTTACAGACATAATCTGCTAGCATAAATTCACCTCTCTGCTGCAATC
CACAAGATAAGTTGACAAGGCTGAATACTCTCACATTGCGAGAAATCAGTAAAGAATGCA
CTAATTTGTCTGTGCACGCCGTACTGGATAATTTGGACCTCATCCCATGCGCAATTGTGG
GTTCCTTTTCACATAATCCAAGATGAGAAGCCTAGGCCCCGGTGGGATCTTTGCATCTTG
CAATGCACTATCATTCAATAAAGGCAAAGTGCTATCTGTGAGTAGGCCTTTCTTGAAGTT
CTTTTCATAGCGGTCCAAGCCAAGATTGTGTAGCATCATCTTTCCATTGATGTAGAAAAT
ATCAT
■■Homology search results ■■ -
sp_hit_id Q9LMT8
Definition sp|Q9LMT8|HDG12_ARATH Homeobox-leucine zipper protein HDG12 OS=Arabidopsis thaliana
Align length 50
Score (bit) 30.8
E-value 4.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911512|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_G11.
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LMT8|HDG12_ARATH Homeobox-leucine zipper protein HDG12 OS=A...    31   4.3  
sp|Q9FX31|HDG11_ARATH Homeobox-leucine zipper protein HDG11 OS=A...    30   5.6  
sp|O94830|DDHD2_HUMAN Phospholipase DDHD2 OS=Homo sapiens GN=DDH...    30   5.6  
sp|Q9NYK1|TLR7_HUMAN Toll-like receptor 7 OS=Homo sapiens GN=TLR...    30   9.5  

>sp|Q9LMT8|HDG12_ARATH Homeobox-leucine zipper protein HDG12
           OS=Arabidopsis thaliana GN=HDG12 PE=2 SV=1
          Length = 687

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 255 ILSHCEKSVKNALI-CLCTPYWIIWTSSHAQLWVPFHIIQDEKPRPRWDL 401
           + SH  +   N ++ C  T +W+  +  +      F+ ++DE+ RP+WD+
Sbjct: 500 VTSHKSRHEPNGMVLCAATSFWLPISPQNV-----FNFLKDERTRPQWDV 544


>sp|Q9FX31|HDG11_ARATH Homeobox-leucine zipper protein HDG11
           OS=Arabidopsis thaliana GN=HDG11 PE=2 SV=1
          Length = 722

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +3

Query: 255 ILSHCEKSVKNALICLCTPYWIIWTSSHAQLWVPFHIIQDEKPRPRWDL 401
           + +H        ++C  T +W+  +  +      F+ ++DE+ RP+WD+
Sbjct: 520 VTAHKSPEPNGTVLCAATTFWLPNSPQNV-----FNFLKDERTRPQWDV 563


>sp|O94830|DDHD2_HUMAN Phospholipase DDHD2 OS=Homo sapiens GN=DDHD2
           PE=1 SV=2
          Length = 711

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -3

Query: 503 LHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDY 363
           L  L L  +   F+K  +    L L  D  LQ+  IP GPR  IL+Y
Sbjct: 394 LKKLQLSEFFDIFEKEKVDKEALALCTDRDLQEIGIPLGPRKKILNY 440


>sp|Q9NYK1|TLR7_HUMAN Toll-like receptor 7 OS=Homo sapiens GN=TLR7
           PE=1 SV=1
          Length = 1049

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 285 NALICLCTPYWIIWTSSHAQLWVPF 359
           N  +C C   W +W  +H ++ +P+
Sbjct: 783 NRFLCTCDAVWFVWWVNHTEVTIPY 807
tr_hit_id Q01L43
Definition tr|Q01L43|Q01L43_ORYSA H0502B11.8 protein OS=Oryza sativa
Align length 64
Score (bit) 102.0
E-value 2.0e-20
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911512|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_G11.
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q01L43|Q01L43_ORYSA H0502B11.8 protein OS=Oryza sativa GN=H05...   102   2e-20
tr|B8ATH5|B8ATH5_ORYSI Putative uncharacterized protein OS=Oryza...   102   2e-20
tr|B6TSD6|B6TSD6_MAIZE SAM domain family protein OS=Zea mays PE=...   100   6e-20
tr|B4FR92|B4FR92_MAIZE Putative uncharacterized protein OS=Zea m...   100   6e-20
tr|B6UBY0|B6UBY0_MAIZE SAM domain family protein OS=Zea mays PE=...    97   4e-19
tr|B6T3E6|B6T3E6_MAIZE Putative uncharacterized protein OS=Zea m...    97   4e-19
tr|B4FGJ8|B4FGJ8_MAIZE Putative uncharacterized protein OS=Zea m...    97   4e-19
tr|Q9SCK3|Q9SCK3_ARATH Putative uncharacterized protein T9C5.150...    97   7e-19
tr|Q7XL02|Q7XL02_ORYSJ OJ000315_02.15 protein OS=Oryza sativa su...    97   7e-19
tr|Q0JDG5|Q0JDG5_ORYSJ Os04g0405100 protein OS=Oryza sativa subs...    97   7e-19
tr|A3ATJ8|A3ATJ8_ORYSJ Putative uncharacterized protein OS=Oryza...    97   7e-19
tr|Q9FLT9|Q9FLT9_ARATH Emb|CAB62460.1 (At5g24650) (At5g24650/K18...    95   2e-18
tr|Q8L9N9|Q8L9N9_ARATH Putative uncharacterized protein OS=Arabi...    95   2e-18
tr|B6SGQ2|B6SGQ2_MAIZE SAM domain family protein OS=Zea mays PE=...    95   3e-18
tr|B4FVT7|B4FVT7_MAIZE Putative uncharacterized protein OS=Zea m...    95   3e-18
tr|B8AJ26|B8AJ26_ORYSI Putative uncharacterized protein OS=Oryza...    94   4e-18
tr|A9SIB2|A9SIB2_PHYPA Predicted protein OS=Physcomitrella paten...    87   4e-16
tr|A9SKP5|A9SKP5_PHYPA Predicted protein OS=Physcomitrella paten...    87   7e-16
tr|Q01G84|Q01G84_OSTTA Homology to unknown gene OS=Ostreococcus ...    84   3e-15
tr|A4RRE6|A4RRE6_OSTLU Predicted protein OS=Ostreococcus lucimar...    82   1e-14
tr|A8JH77|A8JH77_CHLRE Mitochondrial inner membrane translocase ...    70   5e-11
tr|A3A7I7|A3A7I7_ORYSJ Putative uncharacterized protein OS=Oryza...    58   3e-07
tr|A7QES3|A7QES3_VITVI Chromosome chr16 scaffold_86, whole genom...    57   8e-07
tr|Q4RSS7|Q4RSS7_TETNG Chromosome 12 SCAF14999, whole genome sho...    40   0.075
tr|A7PMG3|A7PMG3_VITVI Chromosome chr14 scaffold_21, whole genom...    39   0.22 
tr|A5BLQ6|A5BLQ6_VITVI Putative uncharacterized protein OS=Vitis...    39   0.22 
tr|A9S5Z5|A9S5Z5_PHYPA Predicted protein OS=Physcomitrella paten...    35   1.8  
tr|Q8VZ94|Q8VZ94_ARATH Putative uncharacterized protein At1g7018...    35   2.4  
tr|A9SM55|A9SM55_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.4  
tr|B6NBB3|B6NBB3_BRAFL Putative uncharacterized protein OS=Branc...    34   5.4  

>tr|Q01L43|Q01L43_ORYSA H0502B11.8 protein OS=Oryza sativa
           GN=H0502B11.8 PE=4 SV=1
          Length = 266

 Score =  102 bits (253), Expect = 2e-20
 Identities = 47/64 (73%), Positives = 55/64 (85%)
 Frame = -3

Query: 533 DIFYINGKMMLHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDYVKR 354
           DI+Y  G+ ML  LGL  YEKNFKKGLLTD TLPLLNDSAL+D KIPPGPRLLILD+++R
Sbjct: 199 DIYYSRGRNMLKQLGLQNYEKNFKKGLLTDQTLPLLNDSALRDVKIPPGPRLLILDHIQR 258

Query: 353 NPQL 342
           +P+L
Sbjct: 259 DPEL 262


>tr|B8ATH5|B8ATH5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_15770 PE=4 SV=1
          Length = 266

 Score =  102 bits (253), Expect = 2e-20
 Identities = 47/64 (73%), Positives = 55/64 (85%)
 Frame = -3

Query: 533 DIFYINGKMMLHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDYVKR 354
           DI+Y  G+ ML  LGL  YEKNFKKGLLTD TLPLLNDSAL+D KIPPGPRLLILD+++R
Sbjct: 199 DIYYSRGRNMLKQLGLQNYEKNFKKGLLTDQTLPLLNDSALRDVKIPPGPRLLILDHIQR 258

Query: 353 NPQL 342
           +P+L
Sbjct: 259 DPEL 262


>tr|B6TSD6|B6TSD6_MAIZE SAM domain family protein OS=Zea mays PE=2
           SV=1
          Length = 271

 Score =  100 bits (248), Expect = 6e-20
 Identities = 46/64 (71%), Positives = 53/64 (82%)
 Frame = -3

Query: 533 DIFYINGKMMLHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDYVKR 354
           D +Y  G+ ML  LGL  YEKNFKKGLLTD TLPLL DSAL+D KIPPGPRLLILD++KR
Sbjct: 204 DTYYSRGRSMLQKLGLQNYEKNFKKGLLTDQTLPLLTDSALRDVKIPPGPRLLILDHIKR 263

Query: 353 NPQL 342
           +P+L
Sbjct: 264 DPEL 267


>tr|B4FR92|B4FR92_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 257

 Score =  100 bits (248), Expect = 6e-20
 Identities = 46/64 (71%), Positives = 53/64 (82%)
 Frame = -3

Query: 533 DIFYINGKMMLHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDYVKR 354
           D +Y  G+ ML  LGL  YEKNFKKGLLTD TLPLL DSAL+D KIPPGPRLLILD++KR
Sbjct: 190 DTYYSRGRSMLQKLGLQNYEKNFKKGLLTDQTLPLLTDSALRDVKIPPGPRLLILDHIKR 249

Query: 353 NPQL 342
           +P+L
Sbjct: 250 DPEL 253


>tr|B6UBY0|B6UBY0_MAIZE SAM domain family protein OS=Zea mays PE=2
           SV=1
          Length = 172

 Score = 97.4 bits (241), Expect = 4e-19
 Identities = 44/64 (68%), Positives = 53/64 (82%)
 Frame = -3

Query: 533 DIFYINGKMMLHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDYVKR 354
           D +Y   + MLH LGL++YEKNFK+GLL D TLPLL DSAL+D KIPPGPRLLILD +KR
Sbjct: 105 DTYYSRTRSMLHKLGLEKYEKNFKRGLLNDQTLPLLTDSALRDVKIPPGPRLLILDQIKR 164

Query: 353 NPQL 342
           +P+L
Sbjct: 165 DPEL 168


>tr|B6T3E6|B6T3E6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 271

 Score = 97.4 bits (241), Expect = 4e-19
 Identities = 44/64 (68%), Positives = 53/64 (82%)
 Frame = -3

Query: 533 DIFYINGKMMLHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDYVKR 354
           D +Y   + MLH LGL++YEKNFK+GLL D TLPLL DSAL+D KIPPGPRLLILD +KR
Sbjct: 204 DTYYSRTRSMLHKLGLEKYEKNFKRGLLNDQTLPLLTDSALRDVKIPPGPRLLILDQIKR 263

Query: 353 NPQL 342
           +P+L
Sbjct: 264 DPEL 267


>tr|B4FGJ8|B4FGJ8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 249

 Score = 97.4 bits (241), Expect = 4e-19
 Identities = 44/64 (68%), Positives = 53/64 (82%)
 Frame = -3

Query: 533 DIFYINGKMMLHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDYVKR 354
           D +Y   + MLH LGL++YEKNFK+GLL D TLPLL DSAL+D KIPPGPRLLILD +KR
Sbjct: 182 DTYYSRTRSMLHKLGLEKYEKNFKRGLLNDQTLPLLTDSALRDVKIPPGPRLLILDQIKR 241

Query: 353 NPQL 342
           +P+L
Sbjct: 242 DPEL 245


>tr|Q9SCK3|Q9SCK3_ARATH Putative uncharacterized protein T9C5.150
           (At3g49560) (Putative uncharacterized protein At3g49560)
           (Putative uncharacterized protein) OS=Arabidopsis
           thaliana GN=T9C5.150 PE=2 SV=1
          Length = 261

 Score = 96.7 bits (239), Expect = 7e-19
 Identities = 43/65 (66%), Positives = 56/65 (86%)
 Frame = -3

Query: 533 DIFYINGKMMLHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDYVKR 354
           D F+  G+ ML  LGL++YEKNFKKGLLTD TLPLL DSAL+DA IPPGPRL+ILD+++R
Sbjct: 193 DPFFTRGRTMLVKLGLEKYEKNFKKGLLTDPTLPLLTDSALKDANIPPGPRLMILDHIQR 252

Query: 353 NPQLR 339
           +P+++
Sbjct: 253 DPEIK 257


>tr|Q7XL02|Q7XL02_ORYSJ OJ000315_02.15 protein OS=Oryza sativa
           subsp. japonica GN=OJ000315_02.15 PE=4 SV=1
          Length = 275

 Score = 96.7 bits (239), Expect = 7e-19
 Identities = 45/60 (75%), Positives = 51/60 (85%)
 Frame = -3

Query: 533 DIFYINGKMMLHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDYVKR 354
           DI+Y  G+ ML  LGL  YEKNFKKGLLTD TLPLLNDSAL+D KIPPGPRLLILD+++R
Sbjct: 204 DIYYSRGRNMLKQLGLQNYEKNFKKGLLTDQTLPLLNDSALRDVKIPPGPRLLILDHIQR 263


>tr|Q0JDG5|Q0JDG5_ORYSJ Os04g0405100 protein OS=Oryza sativa subsp.
           japonica GN=Os04g0405100 PE=4 SV=1
          Length = 307

 Score = 96.7 bits (239), Expect = 7e-19
 Identities = 45/60 (75%), Positives = 51/60 (85%)
 Frame = -3

Query: 533 DIFYINGKMMLHNLGLDRYEKNFKKGLLTDSTLPLLNDSALQDAKIPPGPRLLILDYVKR 354
           DI+Y  G+ ML  LGL  YEKNFKKGLLTD TLPLLNDSAL+D KIPPGPRLLILD+++R
Sbjct: 204 DIYYSRGRNMLKQLGLQNYEKNFKKGLLTDQTLPLLNDSALRDVKIPPGPRLLILDHIQR 263