BP911520
Clone id YMU001_000005_H08
Library
Length 189
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000005_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGTGCTTCGGGAGCGTTCTATAAGAGAAGGCAAAGTTCAAGACCTGCTAGCTAGAGGACC
GTTGCCAGACATGCTAGCTGATACAGATGGAAGCTTGGTCTATGACAAGCTGAAAATTTG
CAAACAGTACACGGAAACGCTAGCGGCAATCAGAGTTAGATAAACGGCATTGATGCTGCA
TGTGAGGAA
■■Homology search results ■■ -
sp_hit_id Q60HC8
Definition sp|Q60HC8|UCHL1_MACFA Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Macaca fascicularis
Align length 38
Score (bit) 29.3
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911520|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_H08.
(189 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q60HC8|UCHL1_MACFA Ubiquitin carboxyl-terminal hydrolase isoz... 29 6.5

>sp|Q60HC8|UCHL1_MACFA Ubiquitin carboxyl-terminal hydrolase isozyme
L1 OS=Macaca fascicularis GN=UCHL1 PE=2 SV=1
Length = 223

Score = 29.3 bits (64), Expect = 6.5
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2

Query: 26 EGKVQDLLARGPLP-DMLADTDGSLVYDKLKICKQYTE 136
+G + +L R P P + A ++G+L+ D K+C+++TE
Sbjct: 169 DGHLYELDGRMPFPVNHGASSEGTLLQDAAKVCREFTE 206


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911520|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_H08.
(189 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******