| BP911526 |
| Clone id |
YMU001_000006_A03 |
| Library |
YMU01 |
| Length |
427 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000006_A03. |
| Accession |
BP911526 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
GGGAAGAAAGAAGAATCAAGCCAGCATGGCTAGTCCAGATGAGGGCAGGAAAGACAAGAA
AGGGAGAGAGAACTGGAAGGATGCATGGGTTATGCAACTCATTCATATGTGCGGCACTAT
GCATGATGACTTTGGGAAACCTCCCAAACAGGATGTAGATCTTTGGTCACAGGTTGTGAC
ACAACTTGCTTCGCTTTTTCCAGAATGTGATAAAGATGACCAAGCTTGCAGCAAAAAAAC
TGGGACGCGTGTACGATGCGTATAAGAAGGACAAAGCTCACAATTTTATATTGGGCAATG
ATTGTAGGATAACCTGTGATTGGTACGATATAGTGGATGAGTACATGCATAGCAAAGAGA
CTCATGCTTCAGCACTTGGCGACTCCAGCAACATTGATATGCAAGATTCAGTGAGTCCCT
CACAAGC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q6CN27 |
| Definition |
sp|Q6CN27|ALG10_KLULA Alpha-1,2 glucosyltransferase ALG10 OS=Kluyveromyces lactis |
| Align length |
74 |
| Score (bit) |
31.6 |
| E-value |
1.4 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911526|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_A03.
(427 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6CN27|ALG10_KLULA Alpha-1,2 glucosyltransferase ALG10 OS=Klu... 32 1.4
sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FE... 31 1.8
sp|Q9C103|EME1_SCHPO Crossover junction endonuclease eme1 OS=Sch... 30 3.0
sp|Q492G5|DNLJ_BLOPB DNA ligase OS=Blochmannia pennsylvanicus (s... 30 5.2
sp|Q2LUH7|SURE_SYNAS 5'-nucleotidase surE OS=Syntrophus aciditro... 30 5.3
sp|Q8YMT3|SURE_ANASP 5'-nucleotidase surE OS=Anabaena sp. (strai... 30 5.3
sp|P46570|SRG1_CAEEL Serpentine receptor class gamma-1 OS=Caenor... 30 5.3
sp|P06868|PLMN_BOVIN Plasminogen OS=Bos taurus GN=PLG PE=1 SV=2 30 5.3
sp|P07295|VNCN_PAVBO Probable non-capsid protein NP1 OS=Bovine p... 29 8.8
sp|P0AA75|YHBE_SHIFL Uncharacterized inner membrane transporter ... 29 9.1
sp|P0AA73|YHBE_ECOLI Uncharacterized inner membrane transporter ... 29 9.1
sp|P0AA74|YHBE_ECO57 Uncharacterized inner membrane transporter ... 29 9.1
sp|Q95116|TSP2_BOVIN Thrombospondin-2 OS=Bos taurus GN=THBS2 PE=... 29 9.1
sp|Q7ZU80|LNPA_DANRE Protein lunapark-A OS=Danio rerio GN=lnpa P... 29 9.1
>sp|Q6CN27|ALG10_KLULA Alpha-1,2 glucosyltransferase ALG10
OS=Kluyveromyces lactis GN=ALG10 PE=3 SV=1
Length = 533
Score = 31.6 bits (70), Expect = 1.4
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -3
Query: 365 MSLFAMHVLIHYIVPITGYPTIIAQYKIVSFVLLIRIVHASQFF-CCKLGHLYHILEKAK 189
+ L + ++I Y + +P ++A + ++F L +++ S F C + +YH
Sbjct: 352 LELLGIMLIIRYFTVV--HPFLLADNRHITFYLFKKLIGRSSLFKYCVMAPIYHFSAYVY 409
Query: 188 QVVSQPVTKDLHPV 147
V +P T HP+
Sbjct: 410 LEVMRPSTMIFHPI 423
>sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5
PE=2 SV=2
Length = 2093
Score = 31.2 bits (69), Expect = 1.8
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +2
Query: 35 PDEGRKDKKGRENW--KDAWVMQLIHMCGTMHDDFGKPPKQDVDLWSQVVTQLASLFPEC 208
P E R++ K + W K WV++L H + G PP +WS V
Sbjct: 879 PMEARENVKCPQGWHFKKDWVVELNHAVDSWEYGVGIPPSGLPQVWSPV----------- 927
Query: 209 DKDDQACSKKTGTRVRCV*EGQSS 280
+K +C ++ RVR G+ S
Sbjct: 928 EKTYHSCRRRRWARVRFRNHGELS 951
>sp|Q9C103|EME1_SCHPO Crossover junction endonuclease eme1
OS=Schizosaccharomyces pombe GN=eme1 PE=1 SV=1
Length = 738
Score = 30.4 bits (67), Expect = 3.0
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +3
Query: 222 KLAAKKLGRVYDAYKKDKAHNFILGNDCRIT-------CDWYDIVDEYMHSKETHASALG 380
+ + ++G V A + + + NF+L R+T CD +D + +H +TH
Sbjct: 643 RASTTEIGHVKSADRIENSLNFMLRQILRVTPNIANAICDQFDSIPSLIHHLKTHGEE-- 700
Query: 381 DSSNIDMQDSVS 416
+N+ +Q S+S
Sbjct: 701 SLTNVVIQSSIS 712
>sp|Q492G5|DNLJ_BLOPB DNA ligase OS=Blochmannia pennsylvanicus
(strain BPEN) GN=ligA PE=3 SV=1
Length = 595
Score = 29.6 bits (65), Expect = 5.2
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = -3
Query: 338 IHYIVPITGYPTIIAQYKIVSFVLLIRI-VHASQF--FCCKL 222
IH+ VP+ +I+A ++++SF I+I +HA+ +CC+L
Sbjct: 73 IHHKVPMLSLNSIVASFQLLSFDKRIKIKLHANHVMSYCCEL 114
>sp|Q2LUH7|SURE_SYNAS 5'-nucleotidase surE OS=Syntrophus
aciditrophicus (strain SB) GN=surE PE=3 SV=1
Length = 266
Score = 29.6 bits (65), Expect = 5.3
Identities = 17/82 (20%), Positives = 42/82 (51%)
Frame = -1
Query: 415 LTESCISMLLESPSAEA*VSLLCMYSSTISYQSQVILQSLPNIKL*ALSFLYASYTRPSF 236
L+E + +++ + A V + +YS T+S ++ + +P++ + + A YT +
Sbjct: 82 LSEKPVDLVVSGINIGANVGINVIYSGTVSAATEGAILGVPSMAISLGTLRNADYTFAAH 141
Query: 235 FAASLVIFITFWKKRSKLCHNL 170
FA ++ FI + ++ + N+
Sbjct: 142 FARTMARFIMKYFEKKSVALNI 163
>sp|Q8YMT3|SURE_ANASP 5'-nucleotidase surE OS=Anabaena sp. (strain
PCC 7120) GN=surE PE=3 SV=1
Length = 265
Score = 29.6 bits (65), Expect = 5.3
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Frame = -1
Query: 427 ACEGLTESCISM----LLESP--------SAEA*VSLLCMYSSTISYQSQVILQSLPNIK 284
AC+G C+ + LLESP + A + +YS T+S + +++ +P+I
Sbjct: 69 ACDGTPSDCVKLALWALLESPPDLVLSGINQGANLGTEILYSGTVSAAMEGMIEGIPSIA 128
Query: 283 L*ALSFLYASYTRPSFFAASLV 218
S + ++ + FA LV
Sbjct: 129 FSLTSHISRNFQPAAKFATILV 150
>sp|P46570|SRG1_CAEEL Serpentine receptor class gamma-1
OS=Caenorhabditis elegans GN=srg-1 PE=2 SV=2
Length = 288
Score = 29.6 bits (65), Expect = 5.3
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -1
Query: 298 LPNIKL*ALSFLYASYTRPSFFAASLVIFITFWKKRSK 185
+ N+KL FL Y PS S VI+IT WK R K
Sbjct: 20 IENLKL----FLQLCYLTPSALFLSRVIYITAWKYRKK 53
>sp|P06868|PLMN_BOVIN Plasminogen OS=Bos taurus GN=PLG PE=1 SV=2
Length = 812
Score = 29.6 bits (65), Expect = 5.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 330 YRTNHRLSYNHCPI*NCELCPSYTHRTRVPV 238
Y TN + + +C I +CE P T R VPV
Sbjct: 343 YTTNSEVRWEYCTIPSCESSPLSTERMDVPV 373
>sp|P07295|VNCN_PAVBO Probable non-capsid protein NP1 OS=Bovine
parvovirus PE=4 SV=2
Length = 213
Score = 28.9 bits (63), Expect = 8.8
Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 DAYKKDKAHNFILGNDCRITCDWYDIVDEYMHSKETH--ASALGDSSNIDMQDSV 413
D + ++ ++F LG DC W D+ +++ + +T+ A + DS ++ ++V
Sbjct: 154 DTWYRNMMYHFALGGDCEKCNYWDDVYKKHLANVDTYSVAEEITDSEMLEAAEAV 208
>sp|P0AA75|YHBE_SHIFL Uncharacterized inner membrane transporter
yhbE OS=Shigella flexneri GN=yhbE PE=3 SV=1
Length = 321
Score = 28.9 bits (63), Expect = 9.1
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 271 TKLTILYWAMIVG*PVIGTI*WMSTCIAKRLMLQHLATPATL 396
TKLT W +I G V W+S +A++++L+ LA+P L
Sbjct: 152 TKLTDYTWGVIFG--VGAATVWVSYGVAQKVLLRRLASPQIL 191
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9S4Q5 |
| Definition |
tr|A9S4Q5|A9S4Q5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
71 |
| Score (bit) |
37.0 |
| E-value |
0.043 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911526|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_A03.
(427 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9S4Q5|A9S4Q5_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.043
tr|A0D0W7|A0D0W7_PARTE Chromosome undetermined scaffold_33, whol... 37 0.50
tr|B6KEY2|B6KEY2_TOXGO Putative uncharacterized protein OS=Toxop... 36 0.85
tr|Q2ABA1|Q2ABA1_MONDO Taste receptor type 2 OS=Monodelphis dome... 35 1.4
tr|B3JHQ2|B3JHQ2_9BACE Putative uncharacterized protein OS=Bacte... 33 7.0
tr|B3KLD2|B3KLD2_9BACI Putative uncharacterized protein OS=Geoba... 33 7.2
tr|O61240|O61240_HALRO HrNotch protein OS=Halocynthia roretzi GN... 33 7.2
tr|A5BLY2|A5BLY2_VITVI Putative uncharacterized protein OS=Vitis... 33 9.4
tr|B6M1V3|B6M1V3_BRAFL Putative uncharacterized protein OS=Branc... 33 9.4
>tr|A9S4Q5|A9S4Q5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_74560 PE=4 SV=1
Length = 661
Score = 37.0 bits (84), Expect(2) = 0.043
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +2
Query: 35 PDEGRKDKKGR--ENWKDAWVMQLIHMCGTMHDDFGK-PPKQDVDLWSQVVTQLASLFPE 205
P E + +GR +NW + V LI + G MH++F + KQ V+ W+++ ++ +
Sbjct: 516 PVEAQTKIEGRRGQNWTNCEVEALIALRGEMHEEFERNKQKQGVNTWNKLHARMLGVCKG 575
Query: 206 CDKDDQACSKK 238
K AC KK
Sbjct: 576 FRKSANACKKK 586
Score = 22.7 bits (47), Expect(2) = 0.043
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Frame = +3
Query: 213 KMTKLAAKKLGRVYDAYKKDKAHNFILGNDCRIT--------CDWYDIVDEYMHSK 356
K KK +Y+ YKKD+ + ND + C ++D +D + ++
Sbjct: 578 KSANACKKKYSILYNEYKKDRECAKDINNDAFVAGGLPRSKKCAFFDQMDMWYQNR 633
>tr|A0D0W7|A0D0W7_PARTE Chromosome undetermined scaffold_33, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00012236001 PE=4 SV=1
Length = 630
Score = 37.0 bits (84), Expect = 0.50
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -2
Query: 408 NLAYQCCWSRQVLKHESLCYACTHPLYRTNHRLSYNHCPI*NCELCPSYTHRTRVPVFLL 229
N QC ++ C C+ Y + C + NC CP+ T ++ VP F L
Sbjct: 468 NECVQCIEGCNKCSSQNSCDTCSTGYYYNTQQQCVK-CSVQNCSSCPNDTCQSCVPQFFL 526
Query: 228 QAWS-SLSHSGKSEASCVTTCDQRSTSCLGGF 136
A + L G S +C T + T+CL GF
Sbjct: 527 YAQTCQLCPPGCS--NCQGTLGRECTTCLDGF 556
>tr|B6KEY2|B6KEY2_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_027820 PE=4 SV=1
Length = 2018
Score = 36.2 bits (82), Expect = 0.85
Identities = 25/86 (29%), Positives = 35/86 (40%)
Frame = -2
Query: 363 ESLCYACTHPLYRTNHRLSYNHCPI*NCELCPSYTHRTRVPVFLLQAWSSLSHSGKSEAS 184
E+L Y CT L + CP + CPS + T P + S S S +S
Sbjct: 105 ETLAYPCTIQALSLAESLLSSSCPSSSASTCPSSSAST-CPSSSASSCPSSSASSCPSSS 163
Query: 183 CVTTCDQRSTSCLGGFPKSSCIVPHI 106
+ S+S FP SSC +P +
Sbjct: 164 AYSFSSPSSSSASSSFPSSSCPLPSL 189
>tr|Q2ABA1|Q2ABA1_MONDO Taste receptor type 2 OS=Monodelphis
domestica PE=3 SV=1
Length = 305
Score = 35.4 bits (80), Expect = 1.4
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = -3
Query: 383 VAKC*SMSLFAMHVLIHYIVPITGYPTIIAQYKIVSFVLLIR-----IVHASQFFCCKLG 219
+ +C S+SL +H++ I P + YP ++A + S++ L + + F+C K+
Sbjct: 57 ITRCISLSLMFLHLIFSLIFPKSKYPELMALIILNSWLFLDSCSLWIVTLLNIFYCVKIA 116
Query: 218 HLYHIL 201
+L H+L
Sbjct: 117 NLNHLL 122
>tr|B3JHQ2|B3JHQ2_9BACE Putative uncharacterized protein
OS=Bacteroides coprocola DSM 17136 GN=BACCOP_01414 PE=4
SV=1
Length = 295
Score = 33.1 bits (74), Expect = 7.0
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +3
Query: 186 LLRFFQNVIKMTKLAAKKLGRVYDAYKKDKAHNFILGNDCRITCDWYDIVDEYMHSKETH 365
LL F +++ T L + +YKK++A + +ITC +I DE H +TH
Sbjct: 93 LLAFHPDLLFRTSLNNHIKNYTFFSYKKEEALHLSQRETAKITCCLENIEDELHHPIDTH 152
Query: 366 ASAL 377
+S +
Sbjct: 153 SSTI 156
>tr|B3KLD2|B3KLD2_9BACI Putative uncharacterized protein
OS=Geobacillus sp. Y412MC10 GN=GYMC10DRAFT_6402 PE=4
SV=1
Length = 287
Score = 33.1 bits (74), Expect = 7.2
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 166 PKIYILFGRFPKVIMHSAAHMNELHNPCILPVLSPFLVFPA 44
P ++I+ +F + AH +L + IL +LSPF++FPA
Sbjct: 53 PFLFIVLTKFLMAVQTPEAHNEQLLSNWILGILSPFVLFPA 93
>tr|O61240|O61240_HALRO HrNotch protein OS=Halocynthia roretzi
GN=HrNotch PE=2 SV=1
Length = 2352
Score = 33.1 bits (74), Expect = 7.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 198 KSEASCVTTCDQRSTSCLGGFPKSSCIVPHI*MSCITHA 82
K+ SCV T + S +CLGG+ + C VP + SC A
Sbjct: 995 KNGGSCVQTSNTVSCNCLGGYEGTDCAVPQV--SCTVGA 1031
>tr|A5BLY2|A5BLY2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_035256 PE=4 SV=1
Length = 665
Score = 32.7 bits (73), Expect = 9.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 393 CCWSRQVLKHESLCYACTHPLYRTNHRLSYNHC 295
C W +L HES+ Y+ PL N + NHC
Sbjct: 221 CYWRHYLLPHESVLYSDHEPLKYVNSQKKLNHC 253
>tr|B6M1V3|B6M1V3_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_77203 PE=4 SV=1
Length = 1170
Score = 32.7 bits (73), Expect = 9.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 155 VDLWSQVVTQLASLFPECDKDDQACSKKT 241
VDLW V+ +L +CD+D++ S+KT
Sbjct: 99 VDLWDAVIPKLIQFLEDCDEDEEKWSQKT 127
|