BP911530
Clone id YMU001_000006_A07
Library
Length 505
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGGCGCGGGGATCTGAGAAAAGAAATGAAGATTTGGGGAAAAAAATTCGATGGAGAGGG
TTGGCCATAACAAAGTTCAGGCATTAACTGCAGGTTGAAACGTGTGAAAAAAGGTTCATC
GAGTACTCCAGAGACCCGAGATTTACGAAACACCTAAAGAATTACCCGATTGATGAGATT
CGCTCGAGATGGCGTGAGGCTATTGAGCCTCCTCTCAGGACGGGGTGGAAAGCTGAAAGG
ACAGACGAGTGTAACAAAGCGGAAGCTTTACTCACAGGAAGGGCTGGAACAGAATTGTTG
ACCAAATACTGGAAAGAACACTAACAATCAGGTTGTTTGTGACAGATAACCAGAAATAGG
AGGGAGGAACTTGCATCTATATGGATTGGGAATCATGCTAGACATCCACTCTTTTGCAAC
GAGGTGAGCCATCTCCTTGCCTGTTTTGCAAGTGAAATCGAGAATAAGATGATGACGAAT
TGGGAGTGACAACAACTCCGGAATG
■■Homology search results ■■ -
sp_hit_id Q60BG7
Definition sp|Q60BG7|SYE1_METCA Glutamyl-tRNA synthetase 1 OS=Methylococcus capsulatus
Align length 55
Score (bit) 32.3
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911530|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_A07.
(505 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q60BG7|SYE1_METCA Glutamyl-tRNA synthetase 1 OS=Methylococcus... 32 1.3
sp|Q5F259|AN13B_MOUSE Ankyrin repeat domain-containing protein 1... 32 2.2
sp|Q86YJ7|AN13B_HUMAN Ankyrin repeat domain-containing protein 1... 32 2.2
sp|A0B6I9|ADEC_METTP Adenine deaminase OS=Methanosaeta thermophi... 31 3.8
sp|Q6R0H6|ALEX_MOUSE Protein ALEX OS=Mus musculus GN=Gnas PE=2 SV=1 30 6.5

>sp|Q60BG7|SYE1_METCA Glutamyl-tRNA synthetase 1 OS=Methylococcus
capsulatus GN=gltX1 PE=3 SV=1
Length = 466

Score = 32.3 bits (72), Expect = 1.3
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1

Query: 55 RGLAITKFRH*LQVETCEKRFIEYSRDPRFTKHLKNYPIDEIRSRWREAIEPPLR 219
+GLA F L++E K + R PR++ + P DE+R R E + LR
Sbjct: 97 KGLAYPCFCTPLELEVSRKVQLGSGRPPRYSGRCAHLPADEVRRRHEEGLAATLR 151


>sp|Q5F259|AN13B_MOUSE Ankyrin repeat domain-containing protein 13B
OS=Mus musculus GN=Ankrd13b PE=2 SV=1
Length = 626

Score = 31.6 bits (70), Expect = 2.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1

Query: 223 GWKAERTDECNKAEALLTGRAGTELLTKYWKEH 321
GW++E+T+ N EA + G + EL+T+ EH
Sbjct: 259 GWRSEKTEMVNGYEAKVYGASNVELITRTRTEH 291


>sp|Q86YJ7|AN13B_HUMAN Ankyrin repeat domain-containing protein 13B
OS=Homo sapiens GN=ANKRD13B PE=2 SV=3
Length = 626

Score = 31.6 bits (70), Expect = 2.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1

Query: 223 GWKAERTDECNKAEALLTGRAGTELLTKYWKEH 321
GW++E+T+ N EA + G + EL+T+ EH
Sbjct: 259 GWRSEKTEMVNGYEAKVYGASNVELITRTRTEH 291


>sp|A0B6I9|ADEC_METTP Adenine deaminase OS=Methanosaeta thermophila
(strain DSM 6194 / PT) GN=ade PE=3 SV=1
Length = 567

Score = 30.8 bits (68), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2

Query: 320 TNNQVVCDR*PEIGGRNLHLYGLGIMLDIH 409
+ N+ +C P +GGR+LH Y ++ D H
Sbjct: 189 SKNKTICGHAPGLGGRDLHAYAAALIEDDH 218


>sp|Q6R0H6|ALEX_MOUSE Protein ALEX OS=Mus musculus GN=Gnas PE=2 SV=1
Length = 725

Score = 30.0 bits (66), Expect = 6.5
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1

Query: 127 SRDPRFTKHLKNYP-IDEIRSRWREAIEPPLRTGWK 231
SR+P+ + P + E + RW+EA+ PPLR WK
Sbjct: 283 SREPQIRASAQRDPQLSEKQPRWKEALPPPLR--WK 316


tr_hit_id Q8XT80
Definition tr|Q8XT80|Q8XT80_RALSO Probable maltooligosyl trehalose synthase transmembrane protein OS=Ralstonia solanacearum
Align length 41
Score (bit) 33.1
E-value 7.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911530|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_A07.
(505 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8XT80|Q8XT80_RALSO Probable maltooligosyl trehalose synthase... 33 7.8
tr|B4C1V3|B4C1V3_9CHRO Putative uncharacterized protein OS=Cyano... 33 7.8

>tr|Q8XT80|Q8XT80_RALSO Probable maltooligosyl trehalose synthase
transmembrane protein OS=Ralstonia solanacearum GN=treY
PE=4 SV=1
Length = 940

Score = 33.1 bits (74), Expect = 7.8
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1

Query: 199 AIEPPLRTGWKAERT---DECNKAEALLTGRAGTELLTKYW 312
A + P+RTGW + T D N+A ALL AG LT+ W
Sbjct: 371 AADEPMRTGWDIDGTSGYDFMNQAGALLHDAAGEATLTQAW 411


>tr|B4C1V3|B4C1V3_9CHRO Putative uncharacterized protein
OS=Cyanothece sp. PCC 8802 GN=Cyan8802DRAFT_3020 PE=3
SV=1
Length = 562

Score = 33.1 bits (74), Expect = 7.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1

Query: 103 CEKRFIEYSRDPRFTKHLKNYPIDEIRSRWREAIEPPLRTGWK 231
C +R E + P F KHLK+ D++ ++ +E ++ T WK
Sbjct: 103 CWERATETTTPPEFQKHLKSCDTDDVTAKAQEVVDLADETKWK 145