BP911551 |
Clone id |
YMU001_000006_C08 |
Library |
YMU01 |
Length |
397 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000006_C08. |
Accession |
BP911551 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL342Contig1 |
Sequence |
ACTGCAAGTTTGTTAGACACAGCCCGAACAGTAGATTTGAGTACTTGCTCAGATAGTGAC GATGGAGACTGGCAAAACACAAGCTCCGATAGTGATGATGAATACAGCTCTGCCAGCTTT GATGATGATGAGTCCTCGGGTGATGAAGGTGAGGGTACCACAGAAATTAACGAAGCAATA CTGGACTACATGGGGGCTTTGGAGAAAGAAAGAGAAGATGAGGAAAGAGGGGATTCTCTC ACTGGTGGTGGCGAAGAATCAAGGTCACCAAGAGCTGTCGTAGAGAGTGACTCTTCTGAA GATGAGGTACCACCACGCAACACAATTGGAAATGTGCCTCTTGAATGGTATAAGGATGAA AATCACATTGGGTATGATCTGAGTGGAACGAAAATTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q14137 |
Definition |
sp|Q14137|BOP1_HUMAN Ribosome biogenesis protein BOP1 OS=Homo sapiens |
Align length |
37 |
Score (bit) |
53.1 |
E-value |
4.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SIY9 |
Definition |
tr|Q9SIY9|Q9SIY9_ARATH Putative WD-40 repeat protein OS=Arabidopsis thaliana |
Align length |
81 |
Score (bit) |
83.2 |
E-value |
6.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911551|Adiantum capillus-veneris mRNA, clone: YMU001_000006_C08. (397 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SIY9|Q9SIY9_ARATH Putative WD-40 repeat protein OS=Arabidop... 83 6e-15 tr|A7R5L6|A7R5L6_VITVI Chromosome undetermined scaffold_1000, wh... 79 1e-13 tr|A9RDQ0|A9RDQ0_PHYPA Predicted protein OS=Physcomitrella paten... 79 1e-13 tr|Q6Z3V6|Q6Z3V6_ORYSJ Putative transducin / WD-40 repeat protei... 78 2e-13 tr|Q0D6V7|Q0D6V7_ORYSJ Os07g0435400 protein OS=Oryza sativa subs... 78 2e-13 tr|B8B5N0|B8B5N0_ORYSI Putative uncharacterized protein OS=Oryza... 78 2e-13 tr|Q5DMX4|Q5DMX4_CUCME WD40 OS=Cucumis melo GN=WD40 PE=4 SV=1 74 5e-12 tr|Q2PEP5|Q2PEP5_TRIPR Putative WD-40 repeat protein (Fragment) ... 72 1e-11 tr|A8ID74|A8ID74_CHLRE Predicted protein (Fragment) OS=Chlamydom... 66 1e-09 tr|Q4QH39|Q4QH39_LEIMA Putative uncharacterized protein OS=Leish... 61 2e-08 tr|A4HUV2|A4HUV2_LEIIN Putative uncharacterized protein OS=Leish... 60 4e-08 tr|Q4RIX9|Q4RIX9_TETNG Chromosome undetermined SCAF15041, whole ... 60 5e-08 tr|A0JMQ0|A0JMQ0_DANRE Block of proliferation 1 OS=Danio rerio G... 59 2e-07 tr|A4IHS2|A4IHS2_XENTR LOC100124887 protein OS=Xenopus tropicali... 57 3e-07 tr|A4H6F7|A4H6F7_LEIBR Putative uncharacterized protein OS=Leish... 57 3e-07 tr|Q7ZXX9|Q7ZXX9_XENLA Bop1-prov protein OS=Xenopus laevis PE=2 ... 57 5e-07 tr|Q7T0W1|Q7T0W1_XENLA MGC68939 protein OS=Xenopus laevis PE=2 SV=1 57 5e-07 tr|Q4DRI3|Q4DRI3_TRYCR Putative uncharacterized protein (Fragmen... 55 2e-06 tr|Q4CPG5|Q4CPG5_TRYCR Putative uncharacterized protein (Fragmen... 55 2e-06 tr|Q384Z1|Q384Z1_9TRYP Putative uncharacterized protein OS=Trypa... 54 3e-06 tr|Q562C2|Q562C2_RAT Block of proliferation 1 OS=Rattus norvegic... 54 4e-06 tr|Q54TD8|Q54TD8_DICDI WD40 repeat-containing protein OS=Dictyos... 54 4e-06 tr|Q9U2A9|Q9U2A9_CAEEL Protein Y48B6A.1, confirmed by transcript... 53 7e-06 tr|Q96Q25|Q96Q25_HUMAN KM-PA-2 protein OS=Homo sapiens GN=KM-PA-... 53 7e-06 tr|B4DEN9|B4DEN9_HUMAN cDNA FLJ56617, highly similar to Ribosome... 53 7e-06 tr|B2RDN4|B2RDN4_HUMAN cDNA, FLJ96693, highly similar to Homo sa... 53 7e-06 tr|A8K3R2|A8K3R2_HUMAN cDNA FLJ78061, highly similar to Homo sap... 53 7e-06 tr|Q4P2E9|Q4P2E9_USTMA Putative uncharacterized protein OS=Ustil... 53 7e-06 tr|A8XYW9|A8XYW9_CAEBR Putative uncharacterized protein OS=Caeno... 53 9e-06 tr|Q1LXV3|Q1LXV3_DANRE Novel protein similar to vertebrate block... 52 2e-05
>tr|Q9SIY9|Q9SIY9_ARATH Putative WD-40 repeat protein OS=Arabidopsis thaliana GN=At2g40360 PE=2 SV=1 Length = 775
Score = 83.2 bits (204), Expect = 6e-15 Identities = 40/81 (49%), Positives = 55/81 (67%), Gaps = 5/81 (6%) Frame = +1
Query: 169 NEAILDYMGALEKEREDEER-----GDSLTGGGEESRSPRAVVESDSSEDEVPPRNTIGN 333 ++ +L++ G+++ E +D + G E+S AV ESDSSEDEVP RNT+GN Sbjct: 101 DDDVLEHDGSIDNEDDDGSEHVGSDNNEEHGSDEDSERGEAVEESDSSEDEVPSRNTVGN 160
Query: 334 VPLEWYKDENHIGYDLSGTKI 396 VPL+WY+DE HIGYDL+G KI Sbjct: 161 VPLKWYEDEKHIGYDLTGKKI 181
>tr|A7R5L6|A7R5L6_VITVI Chromosome undetermined scaffold_1000, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005276001 PE=4 SV=1 Length = 674
Score = 79.0 bits (193), Expect = 1e-13 Identities = 38/71 (53%), Positives = 48/71 (67%) Frame = +1
Query: 184 DYMGALEKEREDEERGDSLTGGGEESRSPRAVVESDSSEDEVPPRNTIGNVPLEWYKDEN 363 DY+ A + + + GG ES + + ESDSSEDEV PRNTIG+VPLEWYKDE Sbjct: 65 DYVSADGDDSLHNDPSEENEGGSSESH--QGIEESDSSEDEVAPRNTIGDVPLEWYKDEE 122
Query: 364 HIGYDLSGTKI 396 H+GYD++G KI Sbjct: 123 HVGYDIAGKKI 133
>tr|A9RDQ0|A9RDQ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_112018 PE=4 SV=1 Length = 626
Score = 78.6 bits (192), Expect = 1e-13 Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 5/76 (6%) Frame = +1
Query: 184 DYMGA-----LEKEREDEERGDSLTGGGEESRSPRAVVESDSSEDEVPPRNTIGNVPLEW 348 DY+G+ +E+ E E++G+ +S +P ESDSSEDEVP RNTIG+VPLEW Sbjct: 3 DYLGSAGPRDVEEAVEHEDQGNGAGEANGQSGNPTTAEESDSSEDEVPDRNTIGDVPLEW 62
Query: 349 YKDENHIGYDLSGTKI 396 YK+E+HIGY G KI Sbjct: 63 YKNEDHIGYTKDGLKI 78
>tr|Q6Z3V6|Q6Z3V6_ORYSJ Putative transducin / WD-40 repeat protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0673E01.26 PE=4 SV=1 Length = 648
Score = 78.2 bits (191), Expect = 2e-13 Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 7/68 (10%) Frame = +1
Query: 214 EDEERG-----DSLTGGGEESRSPRA--VVESDSSEDEVPPRNTIGNVPLEWYKDENHIG 372 +D++ G DS G ES P A V ESDSSEDEV PRNTIG+VPLEWYK+E HIG Sbjct: 26 DDDDEGSLSFEDSGEGSDAESDEPDAPAVEESDSSEDEVAPRNTIGDVPLEWYKNEEHIG 85
Query: 373 YDLSGTKI 396 YD++G+KI Sbjct: 86 YDITGSKI 93
>tr|Q0D6V7|Q0D6V7_ORYSJ Os07g0435400 protein OS=Oryza sativa subsp. japonica GN=Os07g0435400 PE=2 SV=1 Length = 678
Score = 78.2 bits (191), Expect = 2e-13 Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 7/68 (10%) Frame = +1
Query: 214 EDEERG-----DSLTGGGEESRSPRA--VVESDSSEDEVPPRNTIGNVPLEWYKDENHIG 372 +D++ G DS G ES P A V ESDSSEDEV PRNTIG+VPLEWYK+E HIG Sbjct: 26 DDDDEGSLSFEDSGEGSDAESDEPDAPAVEESDSSEDEVAPRNTIGDVPLEWYKNEEHIG 85
Query: 373 YDLSGTKI 396 YD++G+KI Sbjct: 86 YDITGSKI 93
>tr|B8B5N0|B8B5N0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25805 PE=4 SV=1 Length = 678
Score = 78.2 bits (191), Expect = 2e-13 Identities = 37/59 (62%), Positives = 46/59 (77%) Frame = +1
Query: 220 EERGDSLTGGGEESRSPRAVVESDSSEDEVPPRNTIGNVPLEWYKDENHIGYDLSGTKI 396 E+ G+ +E +P AV ESDSSEDEV PRNTIG+VPLEWYK+E HIGYD++G+KI Sbjct: 36 EDSGEGSDADSDEPDAP-AVEESDSSEDEVAPRNTIGDVPLEWYKNEEHIGYDITGSKI 93
>tr|Q5DMX4|Q5DMX4_CUCME WD40 OS=Cucumis melo GN=WD40 PE=4 SV=1 Length = 722
Score = 73.6 bits (179), Expect = 5e-12 Identities = 33/58 (56%), Positives = 40/58 (68%) Frame = +1
Query: 223 ERGDSLTGGGEESRSPRAVVESDSSEDEVPPRNTIGNVPLEWYKDENHIGYDLSGTKI 396 E + G + + ESDSSEDEV PRNT+G+VPLEWY+DE HIGYD+SG KI Sbjct: 83 ENDEDQENGNDNPIPDQVEEESDSSEDEVAPRNTVGDVPLEWYRDEKHIGYDISGKKI 140
>tr|Q2PEP5|Q2PEP5_TRIPR Putative WD-40 repeat protein (Fragment) OS=Trifolium pratense PE=2 SV=1 Length = 738
Score = 72.0 bits (175), Expect = 1e-11 Identities = 34/65 (52%), Positives = 44/65 (67%) Frame = +1
Query: 202 EKEREDEERGDSLTGGGEESRSPRAVVESDSSEDEVPPRNTIGNVPLEWYKDENHIGYDL 381 E + ED+ + + + G + + ESDSSEDEV PRNTIG VPL+WY+DE HIGYD+ Sbjct: 89 ESQDEDDVKSEGGSEGSDIHQEGVGGDESDSSEDEVAPRNTIGEVPLKWYEDEPHIGYDI 148
Query: 382 SGTKI 396 G KI Sbjct: 149 KGKKI 153
>tr|A8ID74|A8ID74_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_111274 PE=4 SV=1 Length = 634
Score = 65.9 bits (159), Expect = 1e-09 Identities = 28/37 (75%), Positives = 31/37 (83%) Frame = +1
Query: 286 SDSSEDEVPPRNTIGNVPLEWYKDENHIGYDLSGTKI 396 SDSSEDE P RNT+GNVPL WYKDE HIGYD+ G +I Sbjct: 1 SDSSEDERPNRNTVGNVPLVWYKDEEHIGYDIEGARI 37
>tr|Q4QH39|Q4QH39_LEIMA Putative uncharacterized protein OS=Leishmania major GN=LmjF11.0410 PE=4 SV=1 Length = 808
Score = 61.2 bits (147), Expect = 2e-08 Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 8/67 (11%) Frame = +1
Query: 220 EERGDSLTGGGEESRSPRAVV--------ESDSSEDEVPPRNTIGNVPLEWYKDENHIGY 375 EE ++ G G + + R V ESDSSEDE P N +G++PLEWYKDE+HIGY Sbjct: 107 EELSNAAAGVGGDDDNGRVVRLGTTQHLDESDSSEDE-PTLNRVGDIPLEWYKDEDHIGY 165
Query: 376 DLSGTKI 396 D+ G K+ Sbjct: 166 DIEGKKL 172
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