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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911556
Clone id YMU001_000006_D01
Library
Length 306
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGACGGGTTTTTAGATGAACATGAATGTCATCAAGGGGGTTGGGCAATGATGGTGCACCC
AAATTGTGTCGACACAAGGAGATGCCAAAAGTAGGTGTATTCATGTATGTTTGATGATGG
AGTTGTACTTCGATAAGAGTTGGATACAAGTTTAGACGAGTGTCTTCTGGATATGCATGC
CAATTATGTAATTTGTGGCCGGAACGATGGATTTGCGCTTGCTGATCGGGATGTGGGGAA
AATGGAAAAATGCTGTATTTATGGTGCATTATGTGGTCCTTGATTTGCTCTACAAGCTCA
TCTTAA
■■Homology search results ■■ -
sp_hit_id Q98UK5
Definition sp|Q98UK5|MAFB_DANRE Transcription factor MafB OS=Danio rerio
Align length 36
Score (bit) 33.1
E-value 0.44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911556|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_D01.
         (306 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q98UK5|MAFB_DANRE Transcription factor MafB OS=Danio rerio GN...    33   0.44 
sp|B0UVP7|LIPA_HAES2 Lipoyl synthase OS=Haemophilus somnus (stra...    31   2.2  
sp|Q0I1H8|LIPA_HAES1 Lipoyl synthase OS=Haemophilus somnus (stra...    31   2.2  
sp|Q05738|SRY_MOUSE Sex-determining region Y protein OS=Mus musc...    30   2.9  
sp|Q12967|GNDS_HUMAN Ral guanine nucleotide dissociation stimula...    30   3.8  
sp|P44463|LIPA_HAEIN Lipoyl synthase OS=Haemophilus influenzae G...    30   4.9  
sp|A5UFJ8|LIPA_HAEIG Lipoyl synthase OS=Haemophilus influenzae (...    30   4.9  
sp|A5UBB2|LIPA_HAEIE Lipoyl synthase OS=Haemophilus influenzae (...    30   4.9  
sp|Q4QPL8|LIPA_HAEI8 Lipoyl synthase OS=Haemophilus influenzae (...    30   4.9  
sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo s...    30   4.9  
sp|Q18581|ACN1_CAEEL Inactive angiotensin-converting enzyme-rela...    30   4.9  
sp|Q86Z02|HIPK1_HUMAN Homeodomain-interacting protein kinase 1 O...    29   6.4  
sp|Q62565|SRY_MUSSI Sex-determining region Y protein OS=Mus spic...    29   6.4  
sp|P57978|LIPA_PASMU Lipoyl synthase OS=Pasteurella multocida GN...    29   6.4  
sp|Q65RH7|LIPA_MANSM Lipoyl synthase OS=Mannheimia succiniciprod...    29   6.4  

>sp|Q98UK5|MAFB_DANRE Transcription factor MafB OS=Danio rerio
           GN=mafb PE=2 SV=1
          Length = 356

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 275 HIMHHKYSIFPFSPHPDQQAQIHRSGHKLHNWHAYP 168
           H  HH +S  P SP P    Q+H   H  H+ H +P
Sbjct: 190 HHHHHHHSQDPDSPSPTSPEQLHHRHHHHHHPHGHP 225


>sp|B0UVP7|LIPA_HAES2 Lipoyl synthase OS=Haemophilus somnus (strain
           2336) GN=lipA PE=3 SV=1
          Length = 320

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
 Frame = +2

Query: 20  HECHQGGWAMMVHPNCVDTRRCQK*VYSCMFDDGVVLR*ELD--TSLDECLLDMHANYVI 193
           HEC   G A  +    + TRRC      C    G  L  + D    L E + DM   YV+
Sbjct: 76  HECFNHGTATFMILGAICTRRCP----FCDVAHGKPLPPDPDEPKKLAETIQDMKLRYVV 131

Query: 194 CGRNDGFALADRDVGKMEKC 253
               D   L DR  G   +C
Sbjct: 132 ITSVDRDDLPDRGAGHFAEC 151


>sp|Q0I1H8|LIPA_HAES1 Lipoyl synthase OS=Haemophilus somnus (strain
           129Pt) GN=lipA PE=3 SV=2
          Length = 320

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
 Frame = +2

Query: 20  HECHQGGWAMMVHPNCVDTRRCQK*VYSCMFDDGVVLR*ELD--TSLDECLLDMHANYVI 193
           HEC   G A  +    + TRRC      C    G  L  + D    L E + DM   YV+
Sbjct: 76  HECFNHGTATFMILGAICTRRCP----FCDVAHGKPLPPDPDEPKKLAETIQDMKLRYVV 131

Query: 194 CGRNDGFALADRDVGKMEKC 253
               D   L DR  G   +C
Sbjct: 132 ITSVDRDDLPDRGAGHFAEC 151


>sp|Q05738|SRY_MOUSE Sex-determining region Y protein OS=Mus
           musculus GN=Sry PE=1 SV=2
          Length = 395

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 290 EQIKDHIMHHKYSIFPFSPHPDQQAQIHRSGHKLHNWHAYPE 165
           +Q  DH  HH      F  H  QQ Q H    + H +H +P+
Sbjct: 247 QQFHDH--HHHQQQQQFHDHQQQQQQFHDHQQQQHQFHDHPQ 286


>sp|Q12967|GNDS_HUMAN Ral guanine nucleotide dissociation stimulator
           OS=Homo sapiens GN=RALGDS PE=1 SV=2
          Length = 914

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 224 QQAQIHRSGHKLHNWHAYPEDTRLNLYPT 138
           ++ Q+H  G+K   W  Y  ++ LNLY T
Sbjct: 82  RKVQLHHGGNKGQRWLGYENESALNLYET 110


>sp|P44463|LIPA_HAEIN Lipoyl synthase OS=Haemophilus influenzae
           GN=lipA PE=3 SV=1
          Length = 320

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
 Frame = +2

Query: 20  HECHQGGWAMMVHPNCVDTRRCQK*VYSCMFDDGVVL--R*ELDTSLDECLLDMHANYVI 193
           HEC   G A  +    + TRRC      C    G  L    E    L E + DM   YV+
Sbjct: 76  HECFNHGTATFMILGAICTRRCP----FCDVAHGKPLPPDPEEPQKLAETIQDMKLKYVV 131

Query: 194 CGRNDGFALADRDVGKMEKC 253
               D   L DR  G   +C
Sbjct: 132 ITSVDRDDLPDRGAGHFSEC 151


>sp|A5UFJ8|LIPA_HAEIG Lipoyl synthase OS=Haemophilus influenzae
           (strain PittGG) GN=lipA PE=3 SV=1
          Length = 320

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
 Frame = +2

Query: 20  HECHQGGWAMMVHPNCVDTRRCQK*VYSCMFDDGVVL--R*ELDTSLDECLLDMHANYVI 193
           HEC   G A  +    + TRRC      C    G  L    E    L E + DM   YV+
Sbjct: 76  HECFNHGTATFMILGAICTRRCP----FCDVAHGKPLPPDPEEPQKLAETIQDMKLKYVV 131

Query: 194 CGRNDGFALADRDVGKMEKC 253
               D   L DR  G   +C
Sbjct: 132 ITSVDRDDLPDRGAGHFSEC 151


>sp|A5UBB2|LIPA_HAEIE Lipoyl synthase OS=Haemophilus influenzae
           (strain PittEE) GN=lipA PE=3 SV=1
          Length = 320

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
 Frame = +2

Query: 20  HECHQGGWAMMVHPNCVDTRRCQK*VYSCMFDDGVVL--R*ELDTSLDECLLDMHANYVI 193
           HEC   G A  +    + TRRC      C    G  L    E    L E + DM   YV+
Sbjct: 76  HECFNHGTATFMILGAICTRRCP----FCDVAHGKPLPPDPEEPQKLAETIQDMKLKYVV 131

Query: 194 CGRNDGFALADRDVGKMEKC 253
               D   L DR  G   +C
Sbjct: 132 ITSVDRDDLPDRGAGHFSEC 151


>sp|Q4QPL8|LIPA_HAEI8 Lipoyl synthase OS=Haemophilus influenzae
           (strain 86-028NP) GN=lipA PE=3 SV=1
          Length = 320

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
 Frame = +2

Query: 20  HECHQGGWAMMVHPNCVDTRRCQK*VYSCMFDDGVVL--R*ELDTSLDECLLDMHANYVI 193
           HEC   G A  +    + TRRC      C    G  L    E    L E + DM   YV+
Sbjct: 76  HECFNHGTATFMILGAICTRRCP----FCDVAHGKPLPPDPEEPQKLAETIQDMKLKYVV 131

Query: 194 CGRNDGFALADRDVGKMEKC 253
               D   L DR  G   +C
Sbjct: 132 ITSVDRDDLPDRGAGHFSEC 151


>sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo
           sapiens GN=C14orf43 PE=1 SV=2
          Length = 1045

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -2

Query: 281 KDHIMHHKYSIFPFSPHPDQQAQIHRS 201
           + H+ HH  + +PF P+PD   ++ ++
Sbjct: 298 QSHLAHHSMAPYPFPPNPDMNPELRKA 324
tr_hit_id Q9X8S3
Definition tr|Q9X8S3|Q9X8S3_STRCO Putative uncharacterized protein SCO3656 OS=Streptomyces coelicolor
Align length 62
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911556|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_D01.
         (306 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9X8S3|Q9X8S3_STRCO Putative uncharacterized protein SCO3656 ...    36   1.1  
tr|Q82EU5|Q82EU5_STRAW Putative uncharacterized protein OS=Strep...    35   1.9  
tr|A7RGI8|A7RGI8_NEMVE Predicted protein OS=Nematostella vectens...    34   4.2  
tr|B7KLZ9|B7KLZ9_9CHRO Amino acid adenylation domain protein OS=...    33   5.5  
tr|A7S9E1|A7S9E1_NEMVE Predicted protein OS=Nematostella vectens...    33   5.5  
tr|B5HY95|B5HY95_9ACTO Putative uncharacterized protein OS=Strep...    33   7.2  
tr|A7T588|A7T588_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   7.2  
tr|A6N5A2|A6N5A2_PSEAE Putative uncharacterized protein OS=Pseud...    33   9.4  
tr|A7T7W0|A7T7W0_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   9.4  
tr|A5E618|A5E618_LODEL Putative uncharacterized protein OS=Lodde...    33   9.4  

>tr|Q9X8S3|Q9X8S3_STRCO Putative uncharacterized protein SCO3656
           OS=Streptomyces coelicolor GN=SCO3656 PE=4 SV=1
          Length = 185

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -2

Query: 299 ELVEQIKDHIMHHKYSIFPFSPHPDQQAQIHRSGHKLH--NWHAYPEDTRLNLYPTLIEV 126
           EL+  + DH  H    +FP SPH        R   ++H   WHAYP+D +L    T + V
Sbjct: 115 ELLALVSDH-PHGLAGVFPGSPHAFTALLAQRHEGQVHWRTWHAYPQDGQLVATRTRVGV 173

Query: 125 QL 120
           ++
Sbjct: 174 RV 175


>tr|Q82EU5|Q82EU5_STRAW Putative uncharacterized protein
           OS=Streptomyces avermitilis GN=SAV4518 PE=4 SV=1
          Length = 172

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -2

Query: 299 ELVEQIKDHIMHHKYSIFPFSPHPDQQ--AQIHRSGHKLHNWHAYPEDTRL 153
           EL+  + DH  H    +FP SPH      AQ H        WHAYP+D +L
Sbjct: 108 ELLALVSDH-PHGLAGVFPGSPHAFTALLAQHHEGQVHWRTWHAYPQDGQL 157


>tr|A7RGI8|A7RGI8_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g196846 PE=4 SV=1
          Length = 405

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
 Frame = -2

Query: 266 HHKYSIFPFSPHPDQQAQIHRSGHKLHNWHAYPEDTRLNL-YPTLIEVQLH-HQTYMNTP 93
           HH     P++P              +H  H+YP  T+L+  Y  +  +  + H   ++TP
Sbjct: 327 HHTQLSTPYTP--------------IHTIHSYPRHTQLSTPYTAIYTIHSYPHHPQLSTP 372

Query: 92  TFGISLCRHNLGAPSLPNPLDDIH 21
           +  +    +NL  P L  P   IH
Sbjct: 373 STAMHTIHNNLHHPQLSTPYTPIH 396


>tr|B7KLZ9|B7KLZ9_9CHRO Amino acid adenylation domain protein
            OS=Cyanothece sp. PCC 7424 GN=PCC7424_5756 PE=4 SV=1
          Length = 2581

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 22/72 (30%), Positives = 29/72 (40%)
 Frame = -2

Query: 254  SIFPFSPHPDQQAQIHRSGHKLHNWHAYPEDTRLNLYPTLIEVQLHHQTYMNTPTFGISL 75
            +I P  PH D    I   GH + N   Y  DT+L   P  I+ Q+           G+ +
Sbjct: 1811 TIHPVEPHQDDHRLIESIGHPIANTQIYILDTQLQPVPVGIKGQIF--------IGGVQV 1862

Query: 74   CRHNLGAPSLPN 39
             R  L  P L N
Sbjct: 1863 ARGYLNRPQLTN 1874


>tr|A7S9E1|A7S9E1_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g208806 PE=4 SV=1
          Length = 584

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = -2

Query: 257 YSIFPFSPHPDQQAQIHRSGHKLHNWHAYPEDTRLNL-YPTLIEVQLH-HQTYMNTPTFG 84
           ++I  +  HP    Q+      +H  H+YP  T+L+  Y  +  +  + H T ++TP   
Sbjct: 91  HTIHSYPHHP----QLSTLSTAIHTIHSYPRHTQLSTPYTAIYTIHSYPHHTQLSTPYTA 146

Query: 83  ISLCRHNLGAPSLPNPLDDIH 21
           I      L  P L  P   IH
Sbjct: 147 IHTIHSYLHHPQLSTPYTAIH 167


>tr|B5HY95|B5HY95_9ACTO Putative uncharacterized protein
           OS=Streptomyces sviceus ATCC 29083 GN=SSEG_04380 PE=4
           SV=1
          Length = 174

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -2

Query: 299 ELVEQIKDHIMHHKYSIFPFSPHPDQQ--AQIHRSGHKLHNWHAYPEDTRLNLYPTLIEV 126
           EL+  + DH  H    +FP SPH      AQ +        WHAYP+D +L    T + V
Sbjct: 108 ELLALVSDH-PHGLAGVFPGSPHAFTALLAQWYEGQVYWRTWHAYPQDGQLVATRTRVGV 166

Query: 125 QL 120
           ++
Sbjct: 167 RV 168


>tr|A7T588|A7T588_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g222501 PE=4 SV=1
          Length = 318

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -2

Query: 191 LHNWHAYPEDTRLNLYPTLIEVQLHHQTYMNTPTFGISLCRHNLGAPSLPNPLDDIH 21
           +H  H+YP  T+L+   T I   LHH T ++TP+  I         P    P   IH
Sbjct: 222 IHTIHSYPHHTQLSTPYTAIHSYLHH-TQLSTPSTAIYTIHSYAHHPQQSTPSTAIH 277


>tr|A6N5A2|A6N5A2_PSEAE Putative uncharacterized protein
           OS=Pseudomonas aeruginosa PE=4 SV=1
          Length = 351

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
 Frame = -2

Query: 293 VEQIKDHIMHH--KYSIFPFSPHPDQQAQIHRSGHKLHNWHAYPED-----TRLNLYPTL 135
           V++  D I HH      F  +    Q  QIHR+G  L +W   P++     T  N+ P  
Sbjct: 112 VDEAYDFIEHHLGDQHTFVIAKFGQQTIQIHRAGQPLDDWIHEPDEILIKSTDENITPDS 171

Query: 134 I--EVQLHHQTYMNTP 93
           +  ++++ H  +++TP
Sbjct: 172 LAEDLRVFHHEWLSTP 187


>tr|A7T7W0|A7T7W0_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g149379 PE=4 SV=1
          Length = 285

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = -2

Query: 263 HKYSIFPFSPHPDQQAQIHRSGHKLHNWHAYPEDTRLNLYPTLIEVQLHHQTYMNTPTFG 84
           H    +P  PH             +H  H+YP  T+L+   T I   LHH  +++TP+  
Sbjct: 110 HTIHSYPHHPHLSTT---------IHTIHSYPHHTQLSTPYTAIHSYLHH-PHLSTPSTA 159

Query: 83  ISLCRHNLGA-PSLPNPLDDIH 21
           I    H + + P L  P   IH
Sbjct: 160 I----HTIHSYPQLSTPYKAIH 177


>tr|A5E618|A5E618_LODEL Putative uncharacterized protein
            OS=Lodderomyces elongisporus GN=LELG_05057 PE=4 SV=1
          Length = 1911

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -2

Query: 290  EQIKDHIMHHKYSIFPFSPHPDQQAQIHRSGHKLHNWHAYPEDTRLNLYPTLIEVQLHHQ 111
            +Q + H +HH+       P P QQ Q         N   Y   T ++L PTL  ++LH Q
Sbjct: 1216 QQQQQHYLHHQ-------PPPAQQQQ--------QNQKRYSSSTPVSLSPTLEHLKLHQQ 1260

Query: 110  TYM 102
             Y+
Sbjct: 1261 LYL 1263