BP911557
Clone id YMU001_000006_D02
Library
Length 494
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTGGTTTTTTCTGTTGTATAAAAGACAGGACCTTTTATACTCAAGCAACACTCACAAAA
TCATGTATATTCAGATTACCTTTATGGAGCCCATCTTCTGCTTAGCTTGCTTATGTGGGC
TCGCAAACTCAACCAAGTGTTCCTTGTCATGGCTTAAGTACATAAGCATCTCAAAGAGGA
TCCCAGCCACTAATATATTAGCTTCACAACTGTTTTTATGTTTTCTTGCTCGGAATCAAT
AGAGAGATATGGAGAGAGAGATCTCTCAAAGTAGATAGATAGATCTATGCAGATAGATGA
CGATCTGCTATTGACACGAAATAAACGTAGGCCCCTCAACAAAACCAGCAGCAGCGGTTG
ATCTCTGCAGGTTGCTCGAACCACCTGTTAGCAGACAGTGCCGAATTCACTGGACTCTTT
GCCCTTGATATCAGCGGGTCGTCTGCCTTCGCTATTTTAAAAACCAACTCTTTGCATGCT
ACTGAAGCAGAGTA
■■Homology search results ■■ -
sp_hit_id Q68X46
Definition sp|Q68X46|SYE1_RICTY Glutamyl-tRNA synthetase 1 OS=Rickettsia typhi
Align length 57
Score (bit) 32.3
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911557|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_D02.
(494 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q68X46|SYE1_RICTY Glutamyl-tRNA synthetase 1 OS=Rickettsia ty... 32 1.2
sp|Q5VKN9|VGLG_WCBV Glycoprotein G OS=West Caucasian bat virus G... 30 7.9

>sp|Q68X46|SYE1_RICTY Glutamyl-tRNA synthetase 1 OS=Rickettsia typhi
GN=gltX1 PE=3 SV=1
Length = 448

Score = 32.3 bits (72), Expect = 1.2
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -3

Query: 270 FERSLSPYLSIDSEQENIKTVVKLIY*WLGSSLRCLCT*AMTRNTWLSLRAHISKLS 100
F +S + Y D E+ N K ++ L Y + L+ + + N WLS+RA++ KLS
Sbjct: 295 FSKSPTIYQQYDLERLNHKLLISLDYHEVKERLKEINADYIDENFWLSVRANLQKLS 351


>sp|Q5VKN9|VGLG_WCBV Glycoprotein G OS=West Caucasian bat virus GN=G
PE=1 SV=1
Length = 525

Score = 29.6 bits (65), Expect = 7.9
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2

Query: 226 RKHKNSCEANILVAGILFEMLMYLSHDKEHLVEFASPHKQAKQKMGS 86
R+H + +ANI+ + + S +E +VEF +PH Q QK+ S
Sbjct: 401 REHVDLLKANIVPFRHPMLLRSFTSDTEEDIVEFVNPHLQDTQKLVS 447


tr_hit_id Q93V47
Definition tr|Q93V47|Q93V47_ARATH At3g22942 OS=Arabidopsis thaliana
Align length 47
Score (bit) 40.0
E-value 0.06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911557|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_D02.
(494 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q93V47|Q93V47_ARATH At3g22942 OS=Arabidopsis thaliana GN=AGG2... 40 0.060
tr|B6U329|B6U329_MAIZE AGG2 OS=Zea mays PE=4 SV=1 38 0.23
tr|A9RQE9|A9RQE9_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.30
tr|Q75WU1|Q75WU1_ORYSJ Os03g0635100 protein OS=Oryza sativa subs... 37 0.66
tr|B8AN27|B8AN27_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.66
tr|A7NWX8|A7NWX8_VITVI Chromosome chr5 scaffold_2, whole genome ... 36 1.1
tr|Q9ZP17|Q9ZP17_LUPAN Beta-galactosidase OS=Lupinus angustifoli... 35 2.5
tr|Q9LY73|Q9LY73_ARATH Putative uncharacterized protein MAA21_50... 35 2.5
tr|Q9FDX9|Q9FDX9_ARATH At3g63420 OS=Arabidopsis thaliana GN=AGG1... 35 2.5
tr|B3L359|B3L359_PLAKH E1-e2_atpase/hydrolase, putative OS=Plasm... 35 2.5
tr|A5K6C0|A5K6C0_PLAVI E1-E2_ATPase/hydrolase, putative OS=Plasm... 35 2.5
tr|A2Q570|A2Q570_MEDTR Beta-galactosidase OS=Medicago truncatula... 33 5.6
tr|A9PJY5|A9PJY5_POPJC Putative uncharacterized protein OS=Popul... 33 7.3
tr|Q7RJM8|Q7RJM8_PLAYO Putative uncharacterized protein PY03231 ... 33 7.3
tr|B6U5C3|B6U5C3_MAIZE AGG2 OS=Zea mays PE=2 SV=1 33 9.5
tr|B4FAD2|B4FAD2_MAIZE Putative uncharacterized protein OS=Zea m... 33 9.5

>tr|Q93V47|Q93V47_ARATH At3g22942 OS=Arabidopsis thaliana GN=AGG2
PE=4 SV=1
Length = 100

Score = 40.0 bits (92), Expect = 0.060
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1

Query: 491 SASVACKELVFKIAKADDPLISRAKSPVNSALSANRWFEQPAEINRC 351
+AS +CKE + + DPL+ PVN+ + ++WFE P E RC
Sbjct: 51 NASASCKEFLDSVDSKPDPLLPETTGPVNA--TWDQWFEGPKEAKRC 95


>tr|B6U329|B6U329_MAIZE AGG2 OS=Zea mays PE=4 SV=1
Length = 94

Score = 38.1 bits (87), Expect = 0.23
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1

Query: 485 SVACKELVFKIAKADDPLISRAKSPVNSALSANRWFEQPAEINRC-CWF 342
S A +E + + + DPL+ + PVN S +RWFE P ++ C CWF
Sbjct: 47 SSALQEFLIAMERKADPLLPVSAGPVNQ--SWDRWFEGPQDLRGCKCWF 93


>tr|A9RQE9|A9RQE9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_160449 PE=4 SV=1
Length = 364

Score = 37.7 bits (86), Expect = 0.30
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1

Query: 488 ASVACKELVFKIAKADDPLISRAKSPVNSALSANRW-FEQPAEINRCCW 345
AS ACK+LV + DP I P + + W +E+P + +RCCW
Sbjct: 318 ASKACKDLVAFVESRPDPFI-----PSSDGIGPQSWPYERPVKASRCCW 361


>tr|Q75WU1|Q75WU1_ORYSJ Os03g0635100 protein OS=Oryza sativa subsp.
japonica GN=RGG1 PE=4 SV=1
Length = 93

Score = 36.6 bits (83), Expect = 0.66
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1

Query: 485 SVACKELVFKIAKADDPLISRAKSPVNSALSANRWFEQPAEINRC-CWF 342
S A +EL+ DPL+ P + S +RWFE P ++ RC CWF
Sbjct: 46 SAALQELMVTAESKADPLLPVTTGP--ACQSWDRWFEGPQDLRRCKCWF 92


>tr|B8AN27|B8AN27_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_12732 PE=4 SV=1
Length = 93

Score = 36.6 bits (83), Expect = 0.66
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1

Query: 485 SVACKELVFKIAKADDPLISRAKSPVNSALSANRWFEQPAEINRC-CWF 342
S A +EL+ DPL+ P + S +RWFE P ++ RC CWF
Sbjct: 46 SAALQELMVTAESKADPLLPVTTGP--ACQSWDRWFEGPQDLRRCKCWF 92


>tr|A7NWX8|A7NWX8_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020099001
PE=4 SV=1
Length = 105

Score = 35.8 bits (81), Expect = 1.1
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1

Query: 488 ASVACKELVFKIAKADDPLISRAKSPVNSALSANRWFEQPAEINRC-CW 345
AS AC+EL+ + DPL+ P N +RWFE P + C CW
Sbjct: 57 ASDACRELLSIVESRPDPLLPVTYGPANPIW--DRWFEGPQDSQGCRCW 103


>tr|Q9ZP17|Q9ZP17_LUPAN Beta-galactosidase OS=Lupinus angustifolius
PE=2 SV=1
Length = 730

Score = 34.7 bits (78), Expect = 2.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1

Query: 476 CKELVFKIAKADDPLISRAKSPVNSALSANRWFEQPA 366
CK VF AK + P + R +PVNSA + + E+PA
Sbjct: 414 CKTEVFNTAKVNSPRLHRKMTPVNSAFAWQSYNEEPA 450


>tr|Q9LY73|Q9LY73_ARATH Putative uncharacterized protein MAA21_50
OS=Arabidopsis thaliana GN=MAA21_50 PE=4 SV=1
Length = 138

Score = 34.7 bits (78), Expect = 2.5
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -1

Query: 485 SVACKELVFKIAKADDPLISRAKSPVNSALSANRWFEQP 369
S C+EL+ I K DPL+ P+N L +RWFE P
Sbjct: 91 STVCEELLSVIEKGPDPLLPLTNGPLN--LGWDRWFEGP 127


>tr|Q9FDX9|Q9FDX9_ARATH At3g63420 OS=Arabidopsis thaliana GN=AGG1
PE=2 SV=1
Length = 98

Score = 34.7 bits (78), Expect = 2.5
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -1

Query: 485 SVACKELVFKIAKADDPLISRAKSPVNSALSANRWFEQP 369
S C+EL+ I K DPL+ P+N L +RWFE P
Sbjct: 51 STVCEELLSVIEKGPDPLLPLTNGPLN--LGWDRWFEGP 87


>tr|B3L359|B3L359_PLAKH E1-e2_atpase/hydrolase, putative OS=Plasmodium
knowlesi (strain H) GN=PKH_070210 PE=4 SV=1
Length = 2034

Score = 34.7 bits (78), Expect = 2.5
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +3

Query: 3 WFFLLYK-----RQDLLYSSNTH-KIMYIQITFMEPIFCLACLCGLANSTKCSLSWLKYI 164
WFFL Y R+D + N ++ I F I C+AC C + ++ S++ YI
Sbjct: 1305 WFFLTYFDFVNIRKDNYFKLNRFLSCVFFSIHFSLSILCVACPCAVGLASPLSIAISSYI 1364

Query: 165 SISKRIPATNILASQLFL 218
S I NI ++FL
Sbjct: 1365 CSSIGIILKNINIFEIFL 1382