BP911560
Clone id YMU001_000006_D07
Library
Length 232
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAACCACAGCCCACAGGCCTCATATCTAATCACATAAGTAAAGCACTTGGGACTTACCTC
ATCTGTTTTCATGATTCCTCTCCACTCACGAGCTTGACCCGCTCCTTGGAAGAGTTGGAT
GCCTCCAAATCAATCTCCTCACGAGCACTGTTACAGAGCTTCATTCGCTCAAATAACTTT
GTGCGCCACCATGCATAGCAATCTCCAAAGTGGGGGTTGGTAGTCTCTTCTT
■■Homology search results ■■ -
sp_hit_id Q6GIX3
Definition sp|Q6GIX3|MCO_STAAR Multicopper oxidase mco OS=Staphylococcus aureus (strain MRSA252)
Align length 38
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911560|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_D07.
(232 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6GIX3|MCO_STAAR Multicopper oxidase mco OS=Staphylococcus au... 31 2.2
sp|Q8WTR4|GDPD5_HUMAN Glycerophosphodiester phosphodiesterase do... 30 4.9
sp|Q69HT9|MCO_STAAU Multicopper oxidase mco OS=Staphylococcus au... 30 5.0
sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g5720... 29 6.5

>sp|Q6GIX3|MCO_STAAR Multicopper oxidase mco OS=Staphylococcus
aureus (strain MRSA252) GN=mco PE=3 SV=2
Length = 447

Score = 30.8 bits (68), Expect = 2.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3

Query: 185 RTKLFERMKLCNSAREEIDLEASNSSKERVKLVSGEES 72
+TK + + L SAR+EI ++ S +E+V LV +E+
Sbjct: 267 KTKKLKEINLAPSARKEIVIDLSKMKEEKVNLVDNDET 304


>sp|Q8WTR4|GDPD5_HUMAN Glycerophosphodiester phosphodiesterase
domain-containing protein 5 OS=Homo sapiens GN=GDPD5
PE=2 SV=2
Length = 605

Score = 29.6 bits (65), Expect = 4.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2

Query: 137 PHEHCYRASFAQITLCATMHS 199
P EH YR+SF +TL A +HS
Sbjct: 363 PREHPYRSSFINVTLEAVLHS 383


>sp|Q69HT9|MCO_STAAU Multicopper oxidase mco OS=Staphylococcus
aureus GN=mco PE=1 SV=2
Length = 447

Score = 29.6 bits (65), Expect = 5.0
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -3

Query: 185 RTKLFERMKLCNSAREEIDLEASNSSKERVKLVSGEES 72
+TK + + L SAR+EI ++ S +++V LV +E+
Sbjct: 267 KTKKLKEINLAPSARKEIVIDLSKMKEDKVNLVDNDET 304


>sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g57200
OS=Arabidopsis thaliana GN=At5g57200 PE=2 SV=1
Length = 591

Score = 29.3 bits (64), Expect = 6.5
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Frame = -3

Query: 230 EETTNPHFGDCYAWWRTK---LFERMKLCNSAREEIDLE------ASNSSKERVKLVSGE 78
++ T+P DC AW RT L ER++ + +I+ E + S R +++SGE
Sbjct: 126 KDDTSPLAWDCSAWVRTYALFLEERLECYRVLKYDIEAERLPKASGAASKTHRTRMLSGE 185

Query: 77 ES*KQMR*VPSALLM*LDMRPVG 9
+ +Q+ + L + +P G
Sbjct: 186 DLLEQLPALQQLLYRLIGCQPEG 208


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911560|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_D07.
(232 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******