BP911562
Clone id YMU001_000006_D09
Library
Length 465
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTGTTTTTTTTTTAACAAAAAACATTTACTTATGGCCAATTCATGAACAATCTGATAGT
CCACAATAGTTCACAAGCAGCATAATCTAATGGTCCACAATTCCTCCCAAGCCTTTTAGG
AAACGGTATACTAAGGCCTTGCGTAGGCCAAAAATGACCACCAAAATACCAATCTTTTCA
GTACAGAGACGGCTCCCAACAAAAGCAACTCATAACACTACAGGGAGGCAAACACTATTC
TCTTTGTAAACCCTTCACATGCTCCATTGGCGTCTCTCCACTTTGATGTACATCCCCAGC
CATGAAATCACAATGTTCTCATAAATAGTAAATGGAAAATATTTGATCAACTCTGTGCGT
AAAACTAAAACTCGAGGAATCTGACACATTCTTACCATAATCAGACTAGGTAACTATAAA
CAAAAACCTCCTGATGTTTCGGCACATTCTGTACCAGATACATTC
■■Homology search results ■■ -
sp_hit_id Q9I4D3
Definition sp|Q9I4D3|Y1205_PSEAE Pirin-like protein PA1205 OS=Pseudomonas aeruginosa
Align length 36
Score (bit) 29.6
E-value 6.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911562|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_D09.
(451 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9I4D3|Y1205_PSEAE Pirin-like protein PA1205 OS=Pseudomonas a... 30 6.1
sp|Q66KE9|F161A_XENLA UPF0564 protein FAM161A OS=Xenopus laevis ... 29 8.0

>sp|Q9I4D3|Y1205_PSEAE Pirin-like protein PA1205 OS=Pseudomonas
aeruginosa GN=PA1205 PE=3 SV=1
Length = 315

Score = 29.6 bits (65), Expect = 6.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3

Query: 194 LLLLGAVSVLKRLVFWWSFLAYARP*YTVS*KAWEE 87
+LLLG + WW+F+ +++ + KAWEE
Sbjct: 252 VLLLGGAPFGAEIFMWWNFVGHSKGEIARAQKAWEE 287


>sp|Q66KE9|F161A_XENLA UPF0564 protein FAM161A OS=Xenopus laevis
GN=fam161a PE=2 SV=1
Length = 647

Score = 29.3 bits (64), Expect = 8.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3

Query: 162 FQYRDGSQQKQLITLQGGKHYSLCKPF 242
FQ +QQK+L+ + KH +LC+PF
Sbjct: 422 FQTIHENQQKRLLESKSAKHVTLCEPF 448


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911562|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_D09.
(451 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******