BP911563
Clone id YMU001_000006_D10
Library
Length 460
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATGTCCACTTCATCAAATGTCAAATCGTGACCAAGTTGTCTTCTCAAAATCACTCTCTGC
GTAGAAAGCAACCACTCCACTAAGCTCTCTCTCATCTCATCCAATGTTAGTATCCTCTTG
TTGTCTCTAAATGCATGTAGTCTCCTCCTTCCTAATTTTGAAAAAACTAGCTTTCAAAAC
TAAGTACATATCCTCTATTGTTTGAAGATCAAAATATTTTAAGAGGATCGTCTCTTTCTC
TTCAACAGTTAGAAGGAGGGATACTTTATCATGGATTGTGTCATTTGATAAACAAGAAGA
ACCGTCGCCATTGACATTTTCAACAAAAGCCATAATACTATCATCATTGATGTTACCAAT
ATCCTGTCTCCTCTTTTTCTTTAATAAGAGCCTTGGCTTTTGACAAGTCGTGGAGTGACG
AAGCTTCTCACTCATCTGTGCAGATCAACGAGCACAGAGG
■■Homology search results ■■ -
sp_hit_id Q08358
Definition sp|Q08358|PP220_ASFB7 Polyprotein pp220 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted)
Align length 34
Score (bit) 31.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911563|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_D10.
(439 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q08358|PP220_ASFB7 Polyprotein pp220 OS=African swine fever v... 32 1.5
sp|Q1XDN7|RPOC2_PORYE DNA-directed RNA polymerase subunit beta''... 30 4.4
sp|O59719|YBHB_SCHPO Uncharacterized protein C3B8.11 OS=Schizosa... 29 9.8

>sp|Q08358|PP220_ASFB7 Polyprotein pp220 OS=African swine fever virus
(strain Badajoz 1971 Vero-adapted) GN=Ba71V-92 PE=1 SV=3
Length = 2475

Score = 31.6 bits (70), Expect = 1.5
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -3

Query: 140 LHAFRDNKRILTLDEMRESLVEWLLSTQRVILRR 39
L+ FR+N + L LD +++S++EWL TQ + R
Sbjct: 1182 LNNFRNNIKGLDLDTIQKSIIEWLRETQAANVNR 1215


>sp|Q1XDN7|RPOC2_PORYE DNA-directed RNA polymerase subunit beta''
OS=Porphyra yezoensis GN=rpoC2 PE=3 SV=1
Length = 1226

Score = 30.0 bits (66), Expect = 4.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2

Query: 282 DTIHDKVSLLLTVEEKETILLKYFDLQTIEDMYLV 178
D IH K S +L E+K+ L K Q I+D Y V
Sbjct: 553 DVIHKKESYILETEKKQKFLFKAIPNQKIQDGYTV 587


>sp|O59719|YBHB_SCHPO Uncharacterized protein C3B8.11
OS=Schizosaccharomyces pombe GN=SPBC3B8.11 PE=2 SV=1
Length = 868

Score = 28.9 bits (63), Expect = 9.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3

Query: 207 DQNILRGSSLSLQQLEGGILYHGLCHLINKKN 302
DQ I+ + QQL LYH LC NKKN
Sbjct: 573 DQEIISTPNSDFQQLSLSRLYHVLCSNRNKKN 604


tr_hit_id B6QBL0
Definition tr|B6QBL0|B6QBL0_PENMA Nonribosomal peptide synthase, putative OS=Penicillium marneffei ATCC 18224
Align length 58
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911563|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_D10.
(439 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6QBL0|B6QBL0_PENMA Nonribosomal peptide synthase, putative O... 34 4.1
tr|A4XM53|A4XM53_CALS8 Carbohydrate binding family 6 OS=Caldicel... 33 9.2
tr|O30426|O30426_CALSA Xylanase OS=Caldocellum saccharolyticum G... 33 9.2

>tr|B6QBL0|B6QBL0_PENMA Nonribosomal peptide synthase, putative
OS=Penicillium marneffei ATCC 18224 GN=PMAA_075200 PE=4
SV=1
Length = 5470

Score = 33.9 bits (76), Expect = 4.1
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -2

Query: 354 NINDDSIMAFVENVNGDGSSCLSNDTIHDKVSLLLTVEEKETILLKYFDLQTIEDMYL 181
N N+D + F+ + ++ NDT + + L+V++ ETILL+ L I +Y+
Sbjct: 1593 NSNNDVLALFLSPTDIVATNRTGNDTFEEYIKTSLSVDDLETILLRTLPLYMIPKLYI 1650


>tr|A4XM53|A4XM53_CALS8 Carbohydrate binding family 6
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=Csac_2411 PE=3 SV=1
Length = 1347

Score = 32.7 bits (73), Expect = 9.2
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Frame = -2

Query: 363 DIGNINDDSIMAFVENVNGDGSSCLSNDTIHDKVSLLLTVEEKETILLKYFDLQT----- 199
D GN+ A V N+NG G + D++ K+ ++ V+ +++ + ++T
Sbjct: 1260 DFGNVGPQKFEAMVSNINGKGYIEIKIDSVDGKIIGVVEVQPQDSSSTHWVKVETNVDKV 1319

Query: 198 --IEDMYLVLK 172
+ D+Y V K
Sbjct: 1320 TGVHDVYFVFK 1330


>tr|O30426|O30426_CALSA Xylanase OS=Caldocellum saccharolyticum
GN=XynF PE=4 SV=1
Length = 1347

Score = 32.7 bits (73), Expect = 9.2
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Frame = -2

Query: 363 DIGNINDDSIMAFVENVNGDGSSCLSNDTIHDKVSLLLTVEEKETILLKYFDLQT----- 199
D GN+ A V N+NG G + D++ K+ ++ V+ +++ + ++T
Sbjct: 1260 DFGNVGPQKFEAMVSNINGKGYIEIKIDSVDGKIIGVVEVQPQDSSSTHWVKVETNVDKV 1319

Query: 198 --IEDMYLVLK 172
+ D+Y V K
Sbjct: 1320 TGVHDVYFVFK 1330