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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911568
Clone id YMU001_000006_E03
Library
Length 600
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CACGNGATAAAAGTACTCAGGATCGATGTTTGAAGGTGGGAATGGATGGTGTTGTGCTTA
AGCCAGTTTCACTGATGGAGATGAGCAACAAGCTCTGCTCAATACTGCGGAGGGCAAAAG
TTTATTACAATGTTCGGTGATGTTTGTACCTCAGCGAAAGTGGTTGTGTGTATGGTCAAC
CTGTGCAAATGCTTTCTAGAGCACATTGATTGTTGCTTTGGCAATGCCATGGCTCAACTT
CAGAATCTAAACTCTTGGGGATGTGTGGGATACAAGGCCCACTAAGCAGTGCAACTCAGC
CGAAGGGCTTCTCTGAAGTACACCGAAATCAGCTCTTGGGACCGATGTCTGTGAAGAAGA
TAGTCTCTTCAGTCACAGTGAGGTAGTTATTTACCCTGTTGACAGCCTCAGTCATGACTC
ATGACATGAAATGTTCAAAGGCCGGGGCCTGCAAAGTCAACAAAAATTCTTTATTGCCCA
CTGCACATAGTCAACATACTCTTTATTGCAAATGTTGACTTTGAGGATTAGCTGCTGCAC
TGGCTTCCATATTTAAGTCGTGCACAGTTCTTCAAAATGAACTTGTCGATTGTATCATGT
■■Homology search results ■■ -
sp_hit_id Q9XH58
Definition sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum
Align length 34
Score (bit) 43.9
E-value 0.0006
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911568|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_E03.
         (600 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum...    44   6e-04
sp|O49230|ETR1_BRAOL Ethylene receptor OS=Brassica oleracea GN=E...    44   6e-04
sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum...    44   8e-04
sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum...    44   8e-04
sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1...    44   8e-04
sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum...    43   0.001
sp|Q9SSY6|ETR1_CUCSA Ethylene receptor OS=Cucumis sativus GN=ETR...    42   0.002
sp|O82436|ETR1_CUCMR Ethylene receptor OS=Cucumis melo var. reti...    42   0.002
sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=E...    42   0.002
sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR...    42   0.003
sp|P49333|ETR1_ARATH Ethylene receptor OS=Arabidopsis thaliana G...    42   0.003
sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=E...    41   0.005

>sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum
           GN=ETR1 PE=2 SV=1
          Length = 740

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSIL 107
           DK T++ CL+VGM+GV+LKPVS+ +M N L  +L
Sbjct: 699 DKVTKENCLRVGMEGVILKPVSVDKMRNVLSKLL 732


>sp|O49230|ETR1_BRAOL Ethylene receptor OS=Brassica oleracea GN=ETR1
           PE=2 SV=1
          Length = 735

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 125
           DKST+++C+  G+DGV+LKPVSL  M N L   L    +Y
Sbjct: 693 DKSTKEKCMSFGLDGVLLKPVSLDNMRNVLSDRLEHRVLY 732


>sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum
           GN=ETR2 PE=2 SV=1
          Length = 736

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 19/39 (48%), Positives = 28/39 (71%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 122
           D+ T++ CL+VGMDGV+LKPVS+ +M + L  +L    V
Sbjct: 697 DQVTKENCLRVGMDGVILKPVSIDKMRSVLSGLLEHGTV 735


>sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum
           GN=ETR2 PE=2 SV=1
          Length = 741

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 19/40 (47%), Positives = 29/40 (72%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 125
           D+ T+D C +VGM+GVVLKPVS+ +M N L ++L    ++
Sbjct: 699 DQVTKDNCTRVGMEGVVLKPVSIDKMRNVLSNLLEHRVLF 738


>sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1
           PE=2 SV=1
          Length = 738

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 18/40 (45%), Positives = 29/40 (72%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 125
           DK T++ C++VGMDGV+LKPVS+ +M + L  +L    ++
Sbjct: 696 DKMTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHRVLF 735


>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum
           GN=ETR1 PE=2 SV=1
          Length = 754

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 18/39 (46%), Positives = 28/39 (71%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 122
           D+ T++ C++VGMDGV+LKPVS+ +M + L  +L    V
Sbjct: 713 DRVTKENCMRVGMDGVILKPVSVYKMRSVLSELLEHGVV 751


>sp|Q9SSY6|ETR1_CUCSA Ethylene receptor OS=Cucumis sativus GN=ETR1
           PE=2 SV=1
          Length = 740

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 17/40 (42%), Positives = 29/40 (72%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 125
           DK T++ CL+ GMDG++LKPVS+ +M + L  ++ R  ++
Sbjct: 698 DKVTKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVLF 737


>sp|O82436|ETR1_CUCMR Ethylene receptor OS=Cucumis melo var.
           reticulatus GN=ETR1 PE=2 SV=1
          Length = 740

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 17/40 (42%), Positives = 29/40 (72%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 125
           DK T++ CL+ GMDG++LKPVS+ +M + L  ++ R  ++
Sbjct: 698 DKVTKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVLF 737


>sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=ETR1
           PE=2 SV=1
          Length = 738

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 17/39 (43%), Positives = 28/39 (71%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 122
           D+ T++ C++VGMDGV+LKPVS+ +M + L  +L    +
Sbjct: 697 DRVTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHGVI 735


>sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR1
           PE=2 SV=1
          Length = 741

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 17/40 (42%), Positives = 29/40 (72%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 125
           DK T++ C++VG+DGV+LKPVS+ +M + L  +L    ++
Sbjct: 699 DKITKENCMRVGVDGVILKPVSVDKMRSVLSELLEHRVLF 738
tr_hit_id A9ST35
Definition tr|A9ST35|A9ST35_PHYPA ETR2 ethylene receptor OS=Physcomitrella patens subsp. patens
Align length 38
Score (bit) 52.0
E-value 3.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911568|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_E03.
         (600 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9ST35|A9ST35_PHYPA ETR2 ethylene receptor OS=Physcomitrella ...    52   3e-05
tr|A9CPF1|A9CPF1_PHYPA Ethylene receptor homolog OS=Physcomitrel...    52   3e-05
tr|A9RB97|A9RB97_PHYPA ETR1 ethylene receptor OS=Physcomitrella ...    45   0.004
tr|A9CPG0|A9CPG0_PHYPA Ethylene receptor homolog OS=Physcomitrel...    45   0.004
tr|A9T757|A9T757_PHYPA ETR7 ethylene receptor OS=Physcomitrella ...    44   0.007
tr|A9CPF5|A9CPF5_PHYPA Ethylene receptor homolog OS=Physcomitrel...    44   0.007
tr|Q9M5L8|Q9M5L8_MANIN Ethylene receptor OS=Mangifera indica PE=...    44   0.009
tr|Q8W230|Q8W230_PYRCO Putative ethylene receptor OS=Pyrus commu...    44   0.009
tr|Q8W216|Q8W216_PYRCO Putative ethylene receptor OS=Pyrus commu...    44   0.009
tr|Q8LLJ1|Q8LLJ1_PRUPE Ethylene receptor OS=Prunus persica GN=ET...    44   0.009
tr|Q60I96|Q60I96_PYRPY Ethylene receptor OS=Pyrus pyrifolia GN=P...    44   0.009
tr|Q5QG25|Q5QG25_SOLLC Ethylene receptor OS=Solanum lycopersicum...    44   0.009
tr|A9UAM9|A9UAM9_9ROSA Putative ethylene receptor OS=Prunus sali...    44   0.009
tr|A1INM1|A1INM1_PRUDO Ethylene receptor OS=Prunus domestica sub...    44   0.009
tr|Q93X73|Q93X73_MALDO Ethylene receptor (Fragment) OS=Malus dom...    43   0.016
tr|A9S7V6|A9S7V6_PHYPA ETR3 ethylene receptor protein OS=Physcom...    43   0.016
tr|A9CPE9|A9CPE9_PHYPA Ethylene receptor homolog OS=Physcomitrel...    43   0.016
tr|Q8W221|Q8W221_PYRCO Putative ethylene receptor OS=Pyrus commu...    42   0.021
tr|Q3C1C3|Q3C1C3_DIOKA Ethylene receptor ETR1 OS=Diospyros kaki ...    42   0.021
tr|A9CS85|A9CS85_CUCMR Ethylene receptor OS=Cucumis melo var. re...    42   0.021
tr|A4ZYA5|A4ZYA5_CUCME Putative ethylene receptor OS=Cucumis mel...    42   0.021
tr|Q5I7E2|Q5I7E2_HEVBR Ethylene receptor OS=Hevea brasiliensis P...    42   0.027
tr|B2MUK2|B2MUK2_TOBAC Ethylene receptor OS=Nicotiana tabacum PE...    42   0.027
tr|Q8W2M7|Q8W2M7_PETHY Ethylene receptor OS=Petunia hybrida GN=E...    42   0.035
tr|B3FIB1|B3FIB1_ACTDE Ethylene receptor ETR3 (Fragment) OS=Acti...    42   0.035
tr|A9RL14|A9RL14_PHYPA ETR6 ethylene receptor protein OS=Physcom...    42   0.035
tr|A7LI66|A7LI66_PYRPY Ethylene receptor OS=Pyrus pyrifolia GN=E...    42   0.035
tr|A1E4D6|A1E4D6_COFCA Ethylene receptor isoform 1 (Ethylene rec...    41   0.046
tr|A1E4D5|A1E4D5_9GENT Ethylene receptor OS=Coffea pseudozangueb...    41   0.046
tr|A1E4D4|A1E4D4_9GENT Ethylene receptor OS=Coffea liberica var....    41   0.046

>tr|A9ST35|A9ST35_PHYPA ETR2 ethylene receptor OS=Physcomitrella
           patens subsp. patens GN=ETR2 PE=4 SV=1
          Length = 753

 Score = 52.0 bits (123), Expect = 3e-05
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAK 119
           DK+T++RC+++GMD VVLKP+SL EMS  LC +L   K
Sbjct: 704 DKNTKERCMQIGMDEVVLKPISLQEMSAVLCKLLHNPK 741


>tr|A9CPF1|A9CPF1_PHYPA Ethylene receptor homolog OS=Physcomitrella
           patens GN=ETR1 PE=2 SV=1
          Length = 777

 Score = 52.0 bits (123), Expect = 3e-05
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAK 119
           DK+T++RC+++GMD VVLKP+SL EMS  LC +L   K
Sbjct: 728 DKNTKERCMQIGMDEVVLKPISLQEMSAVLCKLLHNPK 765


>tr|A9RB97|A9RB97_PHYPA ETR1 ethylene receptor OS=Physcomitrella
           patens subsp. patens GN=ETR1 PE=4 SV=1
          Length = 767

 Score = 44.7 bits (104), Expect = 0.004
 Identities = 18/39 (46%), Positives = 28/39 (71%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 122
           DK T+++CL +GMDGV++KP+SL +M   L  +L R  +
Sbjct: 721 DKQTREKCLDLGMDGVIVKPISLEKMRMNLTELLERGSL 759


>tr|A9CPG0|A9CPG0_PHYPA Ethylene receptor homolog OS=Physcomitrella
           patens GN=ETR2 PE=2 SV=1
          Length = 767

 Score = 44.7 bits (104), Expect = 0.004
 Identities = 18/39 (46%), Positives = 28/39 (71%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 122
           DK T+++CL +GMDGV++KP+SL +M   L  +L R  +
Sbjct: 721 DKQTREKCLDLGMDGVIVKPISLEKMRMNLTELLERGSL 759


>tr|A9T757|A9T757_PHYPA ETR7 ethylene receptor OS=Physcomitrella
           patens subsp. patens GN=ETR7 PE=4 SV=1
          Length = 763

 Score = 43.9 bits (102), Expect = 0.007
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 122
           DK T+ +CL +GMDGV++KP+SL +M   L  +L R  +
Sbjct: 717 DKQTRGKCLDLGMDGVIMKPISLEKMRMNLTELLERGSL 755


>tr|A9CPF5|A9CPF5_PHYPA Ethylene receptor homolog OS=Physcomitrella
           patens GN=ETR1 PE=2 SV=1
          Length = 763

 Score = 43.9 bits (102), Expect = 0.007
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 122
           DK T+ +CL +GMDGV++KP+SL +M   L  +L R  +
Sbjct: 717 DKQTRGKCLDLGMDGVIMKPISLEKMRMNLTELLERGSL 755


>tr|Q9M5L8|Q9M5L8_MANIN Ethylene receptor OS=Mangifera indica PE=2
           SV=1
          Length = 739

 Score = 43.5 bits (101), Expect = 0.009
 Identities = 18/40 (45%), Positives = 28/40 (70%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 125
           DK T++ C+ VGMDGV+LKP+SL +M + L  +L    ++
Sbjct: 697 DKITKENCMSVGMDGVILKPISLEKMRSVLLGLLEHRVLF 736


>tr|Q8W230|Q8W230_PYRCO Putative ethylene receptor OS=Pyrus communis
           GN=ETR1a PE=2 SV=1
          Length = 741

 Score = 43.5 bits (101), Expect = 0.009
 Identities = 18/40 (45%), Positives = 29/40 (72%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 125
           DK T++ C++VGMDGV+LKPVS+ +M + L  +L    ++
Sbjct: 699 DKMTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHRVLF 738


>tr|Q8W216|Q8W216_PYRCO Putative ethylene receptor OS=Pyrus communis
           GN=DETR1a PE=4 SV=1
          Length = 741

 Score = 43.5 bits (101), Expect = 0.009
 Identities = 18/40 (45%), Positives = 29/40 (72%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 125
           DK T++ C++VGMDGV+LKPVS+ +M + L  +L    ++
Sbjct: 699 DKMTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHRVLF 738


>tr|Q8LLJ1|Q8LLJ1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR
           PE=4 SV=1
          Length = 738

 Score = 43.5 bits (101), Expect = 0.009
 Identities = 18/40 (45%), Positives = 29/40 (72%)
 Frame = +3

Query: 6   DKSTQDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 125
           DK T++ C++VGMDGV+LKPVS+ +M + L  +L    ++
Sbjct: 696 DKMTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHRVLF 735