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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911574
Clone id YMU001_000006_E11
Library
Length 263
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_E11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCACTTTACTAACTTCTCTTTGTTCCTCGTCCAACAACGAGAATGACACCTCACCCTCAT
CATTGGAACTTGACATAGTGCTACTTTATGAGTCTTCAGAACTATCATCACTGGTAGTTT
CGGACTCATCATTCTCACTCACATCTTCAAGTGCCATAGGTTATGTGGTAGTCATATCCC
TTCTTGCCATGCACACCGATTGTACCCTTGCCCCAATCTTGCACGGCATCAACAACTCTC
AACCAAGGTCATCCCAAAATGAG
■■Homology search results ■■ -
sp_hit_id Q8VCM2
Definition sp|Q8VCM2|NOXO1_MOUSE NADPH oxidase organizer 1 OS=Mus musculus
Align length 43
Score (bit) 29.3
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911574|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_E11.
         (263 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8VCM2|NOXO1_MOUSE NADPH oxidase organizer 1 OS=Mus musculus ...    29   6.5  

>sp|Q8VCM2|NOXO1_MOUSE NADPH oxidase organizer 1 OS=Mus musculus
           GN=Noxo1 PE=2 SV=2
          Length = 349

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 132 MMSPKLPVMIVLKTHKVALCQVPMMRVRCHSRCWTRNKEKLVK 4
           M SP+ PV      H VAL Q+  ++    S CW+ N +  V+
Sbjct: 1   MASPRHPV----SAHAVALVQMDRLQTFAFSVCWSDNSDTFVR 39
tr_hit_id A8NGE4
Definition tr|A8NGE4|A8NGE4_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003)
Align length 22
Score (bit) 32.7
E-value 9.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911574|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_E11.
         (263 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8NGE4|A8NGE4_COPC7 Putative uncharacterized protein OS=Copri...    33   9.2  

>tr|A8NGE4|A8NGE4_COPC7 Putative uncharacterized protein
           OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
           9003) GN=CC1G_13004 PE=4 SV=1
          Length = 424

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -1

Query: 263 LILG*PWLRVVDAVQDWGKGTI 198
           LILG PWLR  + + DW KGT+
Sbjct: 94  LILGLPWLRCTNPIIDWKKGTL 115