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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911579
Clone id YMU001_000006_F04
Library
Length 502
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGGAAGGTGCAGAACAGATGCAGTCGGTCCTTCTGGTGAATCTAAAGAAGAGGCCAAGA
CAAAACATGTGGTTTCTATTAGCAGTAGTAGTCCTGTACTCAATACGAGCGCAGAAGACA
TTGCTTCAGGAGCTTATGCAATGAGCCATGGCACATGCTCAGGAATGAGCGATCATCAAC
TTAGGAGTTTGAAGTCGGAAGTTGATAAGGTTGTACACAAAGAAAACTGGTTTGATGAGG
TTGTTAGAGAGTGTTGGTTCGGGATTCTGATTCAGTTTTCCAACTTGCAAAATCAGATAT
GGTCCTTAGGCCCCTCAAAGATTGGAGCACATCATGCATGGGACAACTATCAAGGTTGTG
GTCTGAATTACAAGGATGGTATACGTATAGATACTGGCTGGGAATCTTTGGCTGCTCCAT
GTTTGCAGGATCCCTTTCACACGAAAAAGTGCAGGTTCTTGAAAAGGTTCCTGCCCCAAG
GTCTGGATGGTGGAGAGAATAA
■■Homology search results ■■ -
sp_hit_id Q29CV2
Definition sp|Q29CV2|MED26_DROPS Mediator of RNA polymerase II transcription subunit 26 OS=Drosophila pseudoobscura pseudoobscura
Align length 65
Score (bit) 33.9
E-value 0.44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911579|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_F04.
         (502 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q29CV2|MED26_DROPS Mediator of RNA polymerase II transcriptio...    34   0.44 
sp|Q5DTT3|CJ018_MOUSE Uncharacterized protein C10orf18 homolog O...    32   2.1  
sp|O84418|PMPB_CHLTR Probable outer membrane protein pmpB OS=Chl...    31   2.8  

>sp|Q29CV2|MED26_DROPS Mediator of RNA polymerase II transcription
           subunit 26 OS=Drosophila pseudoobscura pseudoobscura
           GN=MED26 PE=3 SV=2
          Length = 1602

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -2

Query: 411 PKIPSQYLYVYHPCNSDHNLDSCPMH-DVLQSLRGLRTISDFASWKTESESRTNTL*QPH 235
           P  PS + Y Y   ++D NL    +H  V  S+   RTISD  S    SE     L   H
Sbjct: 102 PTPPSAHFYKYTAGSADSNLTETVVHLPVSPSVPSHRTISDLHSNIDSSEPPPAVLPSQH 161

Query: 234 QTSFL 220
           Q++FL
Sbjct: 162 QSNFL 166


>sp|Q5DTT3|CJ018_MOUSE Uncharacterized protein C10orf18 homolog OS=Mus
            musculus GN=Kiaa2006 PE=2 SV=2
          Length = 2382

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
 Frame = +3

Query: 9    CRTDAVGPSGESKEEAKTKHVVSISSSSPVLNTSAEDIASGAYAMSHGTCSGMSDHQLRS 188
            C T+  G  G++K+E   K           L TS   ++    A SHGTC    D   +S
Sbjct: 913  CNTEVTG--GKTKQELSNK-----------LETSNVVLSGVVSAQSHGTCIPSEDKTCQS 959

Query: 189  LK--SEVDKVVHK--ENWFDEVVRE--CWFGILIQFSNLQNQIWSLGPSKI 323
             K  S  D V        +DE   E  C   +   F NL+N++ S  PS +
Sbjct: 960  TKMVSYNDSVTQATLTTAYDEASSELMCQKSV---FDNLENKVDSFHPSPL 1007


>sp|O84418|PMPB_CHLTR Probable outer membrane protein pmpB
           OS=Chlamydia trachomatis GN=pmpB PE=2 SV=2
          Length = 1754

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 57  KTKHVVSISSSSPVLNTSAEDIASGAYAMSHGTCSGMSDHQLRSLKSEVDK 209
           K   + +I+    + N  A D+  GAY     TC   + H+L+ LK+  DK
Sbjct: 446 KNLSITNITGIIEIANNKATDVGGGAYVKGTLTCE--NSHRLQFLKNSSDK 494
tr_hit_id Q9A1M4
Definition tr|Q9A1M4|Q9A1M4_STRP1 Putative uncharacterized protein OS=Streptococcus pyogenes serotype M1
Align length 120
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911579|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_F04.
         (502 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9A1M4|Q9A1M4_STRP1 Putative uncharacterized protein OS=Strep...    36   1.1  
tr|Q48VI1|Q48VI1_STRPM 3'-phosphoadenosine 5'-phosphosulfate sul...    36   1.1  
tr|Q1JNP6|Q1JNP6_STRPC Co-activator of prophage gene expression ...    36   1.1  
tr|Q1JIU3|Q1JIU3_STRPD Co-activator of prophage gene expression ...    36   1.1  
tr|Q1JDT2|Q1JDT2_STRPB Co-activator of prophage gene expression ...    36   1.1  
tr|B5XJK4|B5XJK4_STRPZ Putative uncharacterized protein OS=Strep...    36   1.1  
tr|Q491D6|Q491D6_STRP1 3'-phosphoadenosine 5'-phosphosulfate sul...    36   1.1  
tr|Q0CEQ8|Q0CEQ8_ASPTN Putative uncharacterized protein OS=Asper...    36   1.1  
tr|B4H897|B4H897_DROPE GL18136 OS=Drosophila persimilis GN=GL181...    34   4.5  
tr|B8LZU0|B8LZU0_9EURO Malonyl CoA-acyl carrier protein transacy...    34   4.5  
tr|A2R1H4|A2R1H4_ASPNC Contig An13c0060, complete genome OS=Aspe...    33   5.8  
tr|B4MSB3|B4MSB3_DROWI GK19936 OS=Drosophila willistoni GN=GK199...    33   7.4  
tr|A7SU85|A7SU85_NEMVE Predicted protein OS=Nematostella vectens...    33   7.6  

>tr|Q9A1M4|Q9A1M4_STRP1 Putative uncharacterized protein
           OS=Streptococcus pyogenes serotype M1 GN=SPy_0189 PE=4
           SV=1
          Length = 444

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
 Frame = +3

Query: 36  GESKEEAKTKHVVSISSSSPVLNTSAEDIASGAYAMSHG--------TCSGMSDHQLRSL 191
           G  KE   TK    + ++SP+ + S EDI    Y  S+           +G+   Q+R  
Sbjct: 192 GYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYKAGLKPSQMRVA 251

Query: 192 KSEVDKVVHKENWFDEVVRECWFGIL-----IQFSNLQNQIWSLGPSKIG--AHHAWDNY 350
               D  V   N +  + +E W  +L     + FSN+  +  ++G   I     H+W +Y
Sbjct: 252 SPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSY 311


>tr|Q48VI1|Q48VI1_STRPM 3'-phosphoadenosine 5'-phosphosulfate
           sulfotransferase OS=Streptococcus pyogenes serotype M28
           GN=M28_Spy0161 PE=4 SV=1
          Length = 444

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
 Frame = +3

Query: 36  GESKEEAKTKHVVSISSSSPVLNTSAEDIASGAYAMSHG--------TCSGMSDHQLRSL 191
           G  KE   TK    + ++SP+ + S EDI    Y  S+           +G+   Q+R  
Sbjct: 192 GYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYKAGLKPSQMRVA 251

Query: 192 KSEVDKVVHKENWFDEVVRECWFGIL-----IQFSNLQNQIWSLGPSKIG--AHHAWDNY 350
               D  V   N +  + +E W  +L     + FSN+  +  ++G   I     H+W +Y
Sbjct: 252 SPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSY 311


>tr|Q1JNP6|Q1JNP6_STRPC Co-activator of prophage gene expression
           OS=Streptococcus pyogenes serotype M12 (strain MGAS9429)
           GN=MGAS9429_Spy0165 PE=4 SV=1
          Length = 444

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
 Frame = +3

Query: 36  GESKEEAKTKHVVSISSSSPVLNTSAEDIASGAYAMSHG--------TCSGMSDHQLRSL 191
           G  KE   TK    + ++SP+ + S EDI    Y  S+           +G+   Q+R  
Sbjct: 192 GYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYKAGLKPSQMRVA 251

Query: 192 KSEVDKVVHKENWFDEVVRECWFGIL-----IQFSNLQNQIWSLGPSKIG--AHHAWDNY 350
               D  V   N +  + +E W  +L     + FSN+  +  ++G   I     H+W +Y
Sbjct: 252 SPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSY 311


>tr|Q1JIU3|Q1JIU3_STRPD Co-activator of prophage gene expression
           IbrA OS=Streptococcus pyogenes serotype M2 (strain
           MGAS10270) GN=MGAS10270_Spy0165 PE=4 SV=1
          Length = 444

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
 Frame = +3

Query: 36  GESKEEAKTKHVVSISSSSPVLNTSAEDIASGAYAMSHG--------TCSGMSDHQLRSL 191
           G  KE   TK    + ++SP+ + S EDI    Y  S+           +G+   Q+R  
Sbjct: 192 GYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYKAGLKPSQMRVA 251

Query: 192 KSEVDKVVHKENWFDEVVRECWFGIL-----IQFSNLQNQIWSLGPSKIG--AHHAWDNY 350
               D  V   N +  + +E W  +L     + FSN+  +  ++G   I     H+W +Y
Sbjct: 252 SPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSY 311


>tr|Q1JDT2|Q1JDT2_STRPB Co-activator of prophage gene expression
           IbrA OS=Streptococcus pyogenes serotype M12 (strain
           MGAS2096) GN=MGAS2096_Spy0174 PE=4 SV=1
          Length = 444

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
 Frame = +3

Query: 36  GESKEEAKTKHVVSISSSSPVLNTSAEDIASGAYAMSHG--------TCSGMSDHQLRSL 191
           G  KE   TK    + ++SP+ + S EDI    Y  S+           +G+   Q+R  
Sbjct: 192 GYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYKAGLKPSQMRVA 251

Query: 192 KSEVDKVVHKENWFDEVVRECWFGIL-----IQFSNLQNQIWSLGPSKIG--AHHAWDNY 350
               D  V   N +  + +E W  +L     + FSN+  +  ++G   I     H+W +Y
Sbjct: 252 SPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSY 311


>tr|B5XJK4|B5XJK4_STRPZ Putative uncharacterized protein
           OS=Streptococcus pyogenes serotype M49 (strain NZ131)
           GN=Spy49_0167 PE=4 SV=1
          Length = 444

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
 Frame = +3

Query: 36  GESKEEAKTKHVVSISSSSPVLNTSAEDIASGAYAMSHG--------TCSGMSDHQLRSL 191
           G  KE   TK    + ++SP+ + S EDI    Y  S+           +G+   Q+R  
Sbjct: 192 GYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYKAGLKPSQMRVA 251

Query: 192 KSEVDKVVHKENWFDEVVRECWFGIL-----IQFSNLQNQIWSLGPSKIG--AHHAWDNY 350
               D  V   N +  + +E W  +L     + FSN+  +  ++G   I     H+W +Y
Sbjct: 252 SPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSY 311


>tr|Q491D6|Q491D6_STRP1 3'-phosphoadenosine 5'-phosphosulfate
           sulfotransferase OS=Streptococcus pyogenes serotype M1
           GN=M5005_Spy0163 PE=4 SV=1
          Length = 444

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
 Frame = +3

Query: 36  GESKEEAKTKHVVSISSSSPVLNTSAEDIASGAYAMSHG--------TCSGMSDHQLRSL 191
           G  KE   TK    + ++SP+ + S EDI    Y  S+           +G+   Q+R  
Sbjct: 192 GYQKECWITKQFKDVWTASPLYDWSVEDIWHAYYKFSYSYNELYDLFYKAGLKPSQMRVA 251

Query: 192 KSEVDKVVHKENWFDEVVRECWFGIL-----IQFSNLQNQIWSLGPSKIG--AHHAWDNY 350
               D  V   N +  + +E W  +L     + FSN+  +  ++G   I     H+W +Y
Sbjct: 252 SPFQDYAVDSLNLYRIIDQETWVKLLGRVQGVNFSNIYGRTKAMGYKSIALPKGHSWKSY 311


>tr|Q0CEQ8|Q0CEQ8_ASPTN Putative uncharacterized protein
           OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_07826
           PE=4 SV=1
          Length = 666

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
 Frame = +3

Query: 9   CRTDAVGPSGESKEEAKTKHVVSISSSSPVLNTSAEDIASGA--YAMSHGTCSGMSDHQL 182
           C   A  P GE       + V  I+  +P ++ + +  A G+  + M HG   G      
Sbjct: 195 CEFSASTPFGEPNHVFPDQPV-PINGVAPTISDATDRFAMGSLIFQMEHGVKPGFVVGVG 253

Query: 183 RSLKSEVDKVVHKENWFDEVVRECWFGILIQFSNLQNQIWSLGPSKIGAHHAWD 344
            SL     +  H E   D V+R+ W G   Q+SN    +  +   K G   +WD
Sbjct: 254 GSLILPEVRTGHPE--LDSVIRKAWLG---QYSNTGEMLEQIESLKCGGRQSWD 302


>tr|B4H897|B4H897_DROPE GL18136 OS=Drosophila persimilis GN=GL18136
           PE=4 SV=1
          Length = 591

 Score = 33.9 bits (76), Expect = 4.5
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -2

Query: 411 PKIPSQYLYVYHPCNSDHNLDSCPMH-DVLQSLRGLRTISDFASWKTESESRTNTL*QPH 235
           P  PS + Y Y   ++D NL    +H  V  S+   RTISD  S    SE     L   H
Sbjct: 102 PTPPSAHFYKYTAGSADSNLTETVVHLPVSPSVPSHRTISDLHSNIDSSEPPPAVLPSQH 161

Query: 234 QTSFL 220
           Q++FL
Sbjct: 162 QSNFL 166


>tr|B8LZU0|B8LZU0_9EURO Malonyl CoA-acyl carrier protein
           transacylase, putative OS=Talaromyces stipitatus ATCC
           10500 GN=TSTA_081050 PE=4 SV=1
          Length = 2095

 Score = 33.9 bits (76), Expect = 4.5
 Identities = 22/65 (33%), Positives = 34/65 (52%)
 Frame = -2

Query: 498 SLHHPDLGAGTFSRTCTFSCERDPANMEQPKIPSQYLYVYHPCNSDHNLDSCPMHDVLQS 319
           SLH  +L   T   T + S  R PA+  +P + S++L+V  P +     D   +  VLQ 
Sbjct: 405 SLHGLNLHLRTMKATKSNSAARIPASQRKPNLESRFLFVTAPFHGSCLKDVSAL--VLQD 462

Query: 318 LRGLR 304
           L+GL+
Sbjct: 463 LKGLK 467