BP911589
Clone id YMU001_000006_G04
Library
Length 515
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGAAAAGCAGATGAGGTGGGCTAACATCCTGTCACAATTTCATTTCTAGATAGTCCATGT
TCAAGGACACAAGAATTTAGTTGAGGTGCGCGTGCGAGAGCGTGTGTGTGTGCACAACAA
TGGAAAAGAGAGAAGAAGAGGAGACCTTGTGTTTGCAGGAGCTAAAACTCACTCTCTACA
TGTGAGCCCGTTTATTCTATTATGTACATAATGAATAAGTATAGTGGACGGGCACCTGGC
CTAACTGGCCACATGGGGCTTTACCCCGATGTAAAGGCCAATGTGTCCGTGGGAGAGAAA
AGAAAACCGTACAAAACCTGTACAAGGCCATCACAAGTATGACCTCACATGCATTGTCTA
GAAAACCCTTGGTTCTTACTATTTCCGCAATACATCATCAAAGCTTCGAGGATATGGTAG
ACCAATACGCCATAGATCTTGCTTTTGTAGATATCTTTTACAATACACAGTGGAGAGACA
GTAGCAAGCTATTCCATACGGGACGGCTATTTGAT
■■Homology search results ■■ -
sp_hit_id P19711
Definition sp|P19711|POLG_BVDVN Genome polyprotein OS=Bovine viral diarrhea virus (isolate NADL)
Align length 65
Score (bit) 30.8
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911589|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_G04.
(515 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P19711|POLG_BVDVN Genome polyprotein OS=Bovine viral diarrhea... 31 3.9
sp|Q96581|C75A4_GENTR Flavonoid 3',5'-hydroxylase OS=Gentiana tr... 31 3.9
sp|O00750|P3C2B_HUMAN Phosphatidylinositol-4-phosphate 3-kinase ... 30 6.7
sp|Q924A0|TF7L2_MOUSE Transcription factor 7-like 2 OS=Mus muscu... 30 8.7
sp|Q9NQB0|TF7L2_HUMAN Transcription factor 7-like 2 OS=Homo sapi... 30 8.7
sp|P31796|ENV_AVISN Envelope glycoprotein OS=Avian spleen necros... 30 8.7

>sp|P19711|POLG_BVDVN Genome polyprotein OS=Bovine viral diarrhea
virus (isolate NADL) PE=1 SV=2
Length = 3988

Score = 30.8 bits (68), Expect = 3.9
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +3

Query: 318 LYKAITSMTSHALSRKPLVLTISAIHHQSFEDMVDQYAIDLAFVDIFYNTQWRDSSKLFH 497
LYK+I + H + LVL A +S D V Q A+DL + + S+
Sbjct: 2499 LYKSIAARLGHETAFATLVLKWLAFGGESVSDHVKQAAVDLVVYYVMNKPSFPGDSETQQ 2558

Query: 498 TGRLF 512
GR F
Sbjct: 2559 EGRRF 2563


>sp|Q96581|C75A4_GENTR Flavonoid 3',5'-hydroxylase OS=Gentiana
triflora GN=CYP75A4 PE=2 SV=1
Length = 516

Score = 30.8 bits (68), Expect = 3.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3

Query: 219 LIHYVHNRINGLTCRE*VLAPANTRSPLLLSFPLL 115
L+HY+H + G CR L P T P+L + PLL
Sbjct: 25 LVHYLHGKATGHRCRR--LPPGPTGWPILGALPLL 57


>sp|O00750|P3C2B_HUMAN Phosphatidylinositol-4-phosphate 3-kinase C2
domain-containing beta polypeptide OS=Homo sapiens
GN=PIK3C2B PE=1 SV=2
Length = 1634

Score = 30.0 bits (66), Expect = 6.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1

Query: 464 IVKDIYKSKIYGVLVYHILEALMMYCGNSKNQGFSRQC 351
++KD K + + ++L AL+ CG + F+RQC
Sbjct: 957 LLKDGLKDSQFSIRYQYLLAALLCCCGKGLREEFNRQC 994


>sp|Q924A0|TF7L2_MOUSE Transcription factor 7-like 2 OS=Mus musculus
GN=Tcf7l2 PE=1 SV=2
Length = 459

Score = 29.6 bits (65), Expect = 8.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1

Query: 250 HMGLYPDVKANVSVGEKRKPYKTCTRPSQV*PHMHCLENPWFLLFP 387
HM LYP A + G+K+K K +P + H C NP L P
Sbjct: 387 HMQLYPGWSARDNYGKKKK-RKRDKQPGETNEHSECFLNPCLSLPP 431


>sp|Q9NQB0|TF7L2_HUMAN Transcription factor 7-like 2 OS=Homo sapiens
GN=TCF7L2 PE=1 SV=2
Length = 619

Score = 29.6 bits (65), Expect = 8.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1

Query: 250 HMGLYPDVKANVSVGEKRKPYKTCTRPSQV*PHMHCLENPWFLLFP 387
HM LYP A + G+K+K K +P + H C NP L P
Sbjct: 410 HMQLYPGWSARDNYGKKKK-RKRDKQPGETNEHSECFLNPCLSLPP 454


>sp|P31796|ENV_AVISN Envelope glycoprotein OS=Avian spleen necrosis
virus GN=env PE=3 SV=1
Length = 567

Score = 29.6 bits (65), Expect = 8.7
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = -2

Query: 394 CIAEIVRTKGFLDNACEV-ILVMALYRFCTVFFSLPRTH-WPLHRGKAPC----GQLGQV 233
C+ + +G +D A ++ IL++A + F T P W L PC G + +
Sbjct: 3 CLTNLRSAEGKVDQASKILILLVAWWGFGTTAEGYPLQQLWEL-----PCDCSGGYVSSI 57

Query: 232 PVHYTYSL 209
P +YTYSL
Sbjct: 58 PTYYTYSL 65


tr_hit_id A8BFS8
Definition tr|A8BFS8|A8BFS8_GIALA Putative uncharacterized protein OS=Giardia lamblia ATCC 50803
Align length 83
Score (bit) 34.3
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911589|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_G04.
(515 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8BFS8|A8BFS8_GIALA Putative uncharacterized protein OS=Giard... 34 3.7
tr|A4R645|A4R645_MAGGR Putative uncharacterized protein OS=Magna... 33 8.3

>tr|A8BFS8|A8BFS8_GIALA Putative uncharacterized protein OS=Giardia
lamblia ATCC 50803 GN=GL50803_9788 PE=4 SV=1
Length = 431

Score = 34.3 bits (77), Expect = 3.7
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = -1

Query: 497 ME*LATVSPLCIVKDIYKSKIYGVLVYHILEALMMYCGNSKNQGFSRQCM*GHTCDGLVQ 318
+E ATV PLC KD S VL++ + + + GN N+ F +GL
Sbjct: 144 LEEAATVCPLCRRKDTVLSSSIPVLIFLVSQEGCLRTGNESNRAF--------VFEGLEY 195

Query: 317 VLYGFLFS-----PTDTLAFTSG 264
+ G +F+ P++TL+ +G
Sbjct: 196 LTIGVIFAAQSNGPSETLSLRAG 218


>tr|A4R645|A4R645_MAGGR Putative uncharacterized protein
OS=Magnaporthe grisea GN=MGG_10175 PE=4 SV=1
Length = 162

Score = 33.1 bits (74), Expect = 8.3
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +2

Query: 2 EKQMRWANILSQFHF*IVHVQGHKN 76
++Q+RW+ LS+FHF I++ +G KN
Sbjct: 41 KRQIRWSEFLSEFHFRIIYRKGTKN 65