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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911592
Clone id YMU001_000006_G08
Library
Length 335
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCTCACATATGCTTATCAAGATGCACATGGTAACGAATATCATCAAGGCCATGACCTTGT
ACAAACCCCTATGGATGGTACGACTGGAGTCAAAGACTATCTGAAGATGATGCAAAGCCT
CAAGCTACCAGAAGAAGTGACAGAAAAGTCAAAGTCAATGGGAGCTAAAGTCTAGAAAGC
TACACAAAGGTCACCACCAAAATCTCCTCCGAAGAGACAGATTCTGCCAAAAAGTAGAAT
GGATCTTCTAAGATCAAAGGTTACTCAGATGCAGGAGGACAATGCTCAACAATTGCAAAA
AAGTGCAGTATCACAGTCATACGAGTCAACAAACA
■■Homology search results ■■ -
sp_hit_id O01761
Definition sp|O01761|UNC89_CAEEL Muscle M-line assembly protein unc-89 OS=Caenorhabditis elegans
Align length 74
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911592|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_G08.
         (335 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O01761|UNC89_CAEEL Muscle M-line assembly protein unc-89 OS=C...    31   1.7  
sp|A7Y3K2|YCF1_IPOPU Putative membrane protein ycf1 OS=Ipomoea p...    30   2.9  
sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associ...    30   2.9  
sp|Q5RCA4|ZN326_PONAB Zinc finger protein 326 OS=Pongo abelii GN...    30   3.8  
sp|Q5BKZ1|ZN326_HUMAN Zinc finger protein 326 OS=Homo sapiens GN...    30   3.8  
sp|P95375|EXBB_NEIMC Biopolymer transport protein exbB OS=Neisse...    30   4.9  
sp|P64100|EXBB_NEIMB Biopolymer transport protein exbB OS=Neisse...    30   4.9  
sp|P64099|EXBB_NEIMA Biopolymer transport protein exbB OS=Neisse...    30   4.9  
sp|Q032Z6|SECA_LACLS Protein translocase subunit secA OS=Lactoco...    29   6.4  
sp|A2RHJ5|SECA_LACLM Protein translocase subunit secA OS=Lactoco...    29   6.4  
sp|P16053|NFM_CHICK Neurofilament medium polypeptide OS=Gallus g...    29   6.4  
sp|P34618|CEC1_CAEEL Chromo domain-containing protein cec-1 OS=C...    29   6.4  
sp|Q55FJ6|Y8078_DICDI Probable serine/threonine-protein kinase D...    29   8.4  
sp|P76072|STFR_ECOLI Side tail fiber protein homolog from lambdo...    29   8.4  
sp|O06433|EXBB_NEIGO Biopolymer transport protein exbB OS=Neisse...    29   8.4  

>sp|O01761|UNC89_CAEEL Muscle M-line assembly protein unc-89
            OS=Caenorhabditis elegans GN=unc-89 PE=1 SV=3
          Length = 8081

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
 Frame = +2

Query: 122  KLPEEVTEKSKSMGAKV*KA----TQRSPPKSPPKRQILPKSRMDLLRSKVTQMQEDNAQ 289
            K P   T+K KS  +   K      ++SPPKSP K++  P+   D ++S V + +  +A 
Sbjct: 1435 KSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPED-VKSPVKKEKSPDAT 1493

Query: 290  QLQKSAVSQSYEST 331
             + + +   + E T
Sbjct: 1494 NIVEVSSETTIEKT 1507


>sp|A7Y3K2|YCF1_IPOPU Putative membrane protein ycf1 OS=Ipomoea
            purpurea GN=ycf1-A PE=3 SV=1
          Length = 2057

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 23/76 (30%), Positives = 38/76 (50%)
 Frame = +1

Query: 88   SQRLSEDDAKPQATRRSDRKVKVNGS*SLESYTKVTTKISSEETDSAKK*NGSSKIKGYS 267
            +Q L E+D+     ++  +K K N     E  +K  ++  SE TDS KK    S+ K  +
Sbjct: 1731 NQNLEEEDSAKSDMKKGTKKSKTNS----EKKSKTNSEKKSE-TDSEKKSETDSEKKSET 1785

Query: 268  DAGGQCSTIAKKCSIT 315
            D+  +  T ++K S T
Sbjct: 1786 DSEKKSETDSEKKSET 1801


>sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription
           domain-associated protein OS=Homo sapiens GN=TRRAP PE=1
           SV=3
          Length = 3859

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = +2

Query: 65  TPMDGTTGVKDYLKMMQSL---KLPEEVTEKSKSMGAKV*KATQRSPPKSPPKRQILPKS 235
           T +D TT +K YL+ + +L     P+E   K     ++  +    SP  S     I+P+ 
Sbjct: 10  TVVDQTTLMKKYLQFVAALTDVNTPDETKLKMMQEVSENFENVTSSPQYSTFLEHIIPRF 69

Query: 236 RMDLLRSKVTQMQEDNAQQLQK 301
              L   +V  +QE  AQQL+K
Sbjct: 70  LTFLQDGEVQFLQEKPAQQLRK 91


>sp|Q5RCA4|ZN326_PONAB Zinc finger protein 326 OS=Pongo abelii
           GN=ZNF326 PE=2 SV=1
          Length = 579

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +2

Query: 104 KMMQSLKLPEEVTEKSKSMGAKV*KAT-QRSPPKSPPKRQILPKSRMDLLRSKVTQMQED 280
           KMMQ    P     K   +   + K +  +SP K+ PK +   K R++  R K  + +E 
Sbjct: 240 KMMQPFNKPSGTFIKKPKLAKPMEKISLSKSPTKTDPKNEEEEKRRIEARREKQRRRREK 299

Query: 281 NAQQ 292
           N+++
Sbjct: 300 NSEK 303


>sp|Q5BKZ1|ZN326_HUMAN Zinc finger protein 326 OS=Homo sapiens
           GN=ZNF326 PE=1 SV=2
          Length = 582

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +2

Query: 104 KMMQSLKLPEEVTEKSKSMGAKV*KAT-QRSPPKSPPKRQILPKSRMDLLRSKVTQMQED 280
           KMMQ    P     K   +   + K +  +SP K+ PK +   K R++  R K  + +E 
Sbjct: 240 KMMQPFNKPSGTFIKKPKLAKPMEKISLSKSPTKTDPKNEEEEKRRIEARREKQRRRREK 299

Query: 281 NAQQ 292
           N+++
Sbjct: 300 NSEK 303


>sp|P95375|EXBB_NEIMC Biopolymer transport protein exbB OS=Neisseria
           meningitidis serogroup C GN=exbB PE=3 SV=1
          Length = 220

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -2

Query: 109 HLQIVFDSSRTIHRGLYKVMALMIFVTMCILISIC 5
           +L++VF+S   +  G++ +M LM  VT C+++  C
Sbjct: 2   NLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRC 36


>sp|P64100|EXBB_NEIMB Biopolymer transport protein exbB OS=Neisseria
           meningitidis serogroup B GN=exbB PE=3 SV=1
          Length = 220

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -2

Query: 109 HLQIVFDSSRTIHRGLYKVMALMIFVTMCILISIC 5
           +L++VF+S   +  G++ +M LM  VT C+++  C
Sbjct: 2   NLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRC 36


>sp|P64099|EXBB_NEIMA Biopolymer transport protein exbB OS=Neisseria
           meningitidis serogroup A GN=exbB PE=3 SV=1
          Length = 220

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -2

Query: 109 HLQIVFDSSRTIHRGLYKVMALMIFVTMCILISIC 5
           +L++VF+S   +  G++ +M LM  VT C+++  C
Sbjct: 2   NLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRC 36


>sp|Q032Z6|SECA_LACLS Protein translocase subunit secA
           OS=Lactococcus lactis subsp. cremoris (strain SK11)
           GN=secA PE=3 SV=1
          Length = 865

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 47  GHDLVQTPMDGTTGVKDYLKMMQSLKLPEEVTEKSKSMG 163
           GH+L     D  T VKD L+ +Q+  LPEE  E S+  G
Sbjct: 661 GHELAGNLKDEET-VKDLLQTVQNTMLPEEAIELSELTG 698


>sp|A2RHJ5|SECA_LACLM Protein translocase subunit secA
           OS=Lactococcus lactis subsp. cremoris (strain MG1363)
           GN=secA PE=3 SV=1
          Length = 865

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 47  GHDLVQTPMDGTTGVKDYLKMMQSLKLPEEVTEKSKSMG 163
           GH+L     D  T VKD L+ +Q+  LPEE  E S+  G
Sbjct: 661 GHELAGNLKDEET-VKDLLQTVQNTMLPEEAIELSELTG 698
tr_hit_id B3MEW8
Definition tr|B3MEW8|B3MEW8_DROAN GF13033 OS=Drosophila ananassae
Align length 90
Score (bit) 36.2
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911592|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_G08.
         (335 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3MEW8|B3MEW8_DROAN GF13033 OS=Drosophila ananassae GN=GF1303...    36   0.85 
tr|A8N8X8|A8N8X8_COPC7 Predicted protein OS=Coprinopsis cinerea ...    36   0.85 
tr|B0CTV4|B0CTV4_LACBS Predicted protein OS=Laccaria bicolor (st...    35   1.9  
tr|Q75I10|Q75I10_ORYSJ Putative mechanosensitive ion channel pro...    35   2.5  
tr|Q10J61|Q10J61_ORYSJ Os03g0432900 protein OS=Oryza sativa subs...    35   2.5  
tr|B8AKF7|B8AKF7_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.5  
tr|A3AJE0|A3AJE0_ORYSJ Putative uncharacterized protein OS=Oryza...    35   2.5  
tr|A7MBR7|A7MBR7_DANRE Putative uncharacterized protein (Fragmen...    34   4.2  
tr|A5PN48|A5PN48_DANRE Novel protein (Zgc:77289) OS=Danio rerio ...    34   4.2  
tr|A5PN47|A5PN47_DANRE Novel protein (Zgc:77289) OS=Danio rerio ...    34   4.2  
tr|Q7SXM5|Q7SXM5_DANRE Brd3b protein (Fragment) OS=Danio rerio G...    33   5.5  
tr|Q6NZW1|Q6NZW1_DANRE Bromodomain containing 3b OS=Danio rerio ...    33   5.5  
tr|A9UMC0|A9UMC0_XENTR LOC100135304 protein (Fragment) OS=Xenopu...    33   5.5  
tr|A7YYF8|A7YYF8_DANRE Putative uncharacterized protein (Fragmen...    33   5.5  
tr|B4NKQ2|B4NKQ2_DROWI GK13319 OS=Drosophila willistoni GN=GK133...    33   5.5  
tr|Q6ME34|Q6ME34_PARUW Putative uncharacterized protein OS=Proto...    33   7.2  
tr|B6N372|B6N372_BRAFL Putative uncharacterized protein OS=Branc...    33   7.2  
tr|A7BW26|A7BW26_9GAMM Putative uncharacterized protein OS=Beggi...    33   9.4  
tr|B3MMC9|B3MMC9_DROAN GF14316 OS=Drosophila ananassae GN=GF1431...    33   9.4  

>tr|B3MEW8|B3MEW8_DROAN GF13033 OS=Drosophila ananassae GN=GF13033
           PE=4 SV=1
          Length = 788

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 25/90 (27%), Positives = 37/90 (41%)
 Frame = +2

Query: 59  VQTPMDGTTGVKDYLKMMQSLKLPEEVTEKSKSMGAKV*KATQRSPPKSPPKRQILPKSR 238
           V+    G+ G K  +    S    +     S S G  V  + Q  PP  PPK        
Sbjct: 61  VEVQHSGSAGNKPNVSTKASTSFSKATGNVSTSSGGSVSTSDQYQPPAPPPK-------- 112

Query: 239 MDLLRSKVTQMQEDNAQQLQKSAVSQSYES 328
            +  + K  Q Q+   QQ  +S+ ++SYES
Sbjct: 113 ANQKQQKQNQQQQQQQQQPPRSSSNESYES 142


>tr|A8N8X8|A8N8X8_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_00853 PE=4
           SV=1
          Length = 1103

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 16/59 (27%), Positives = 35/59 (59%)
 Frame = +2

Query: 35  EYHQGHDLVQTPMDGTTGVKDYLKMMQSLKLPEEVTEKSKSMGAKV*KATQRSPPKSPP 211
           E+H G +L   P+  +  + +Y++++ +LK+P+E  +++  +G  V    + +PP  PP
Sbjct: 794 EHHPGKELYIIPLKASEPIPEYMELLDNLKIPKE-RKRNYLIGIWVLNKGKLAPPPPPP 851


>tr|B0CTV4|B0CTV4_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_305279 PE=4 SV=1
          Length = 980

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +2

Query: 35  EYHQGHDLVQTPMDGTTGVKDYLKMMQSLKLPEEVTEKSKSMGAKV-*KATQRSPPKSPP 211
           E+H G +L   P+  T  + DY++++ +LKLP  V +    +G  +  K     PP SPP
Sbjct: 670 EHHPGRELYIIPLPATQPLPDYIELLDNLKLP-PVRKADYLVGIWILNKGKLAPPPPSPP 728


>tr|Q75I10|Q75I10_ORYSJ Putative mechanosensitive ion channel
           protein OS=Oryza sativa subsp. japonica
           GN=OSJNBb0031F05.17 PE=4 SV=1
          Length = 661

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +1

Query: 82  DWSQRLSEDDAKPQATRRSDRKVKVNGS*SLESYTKVTTKISSEETDSAKK 234
           D S R+S+D +KP+   R D KVK   S   +S +     IS+ E    KK
Sbjct: 482 DTSARISDDKSKPRPASREDHKVKTVTSAEAKSASADNASISNSEKQEQKK 532


>tr|Q10J61|Q10J61_ORYSJ Os03g0432900 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0432900 PE=4 SV=1
          Length = 1837

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +1

Query: 82  DWSQRLSEDDAKPQATRRSDRKVKVNGS*SLESYTKVTTKISSEETDSAKK 234
           D S R+S+D +KP+   R D KVK   S   +S +     IS+ E    KK
Sbjct: 255 DTSARISDDKSKPRPASREDHKVKTVTSAEAKSASADNASISNSEKQEQKK 305


>tr|B8AKF7|B8AKF7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_12168 PE=4 SV=1
          Length = 356

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +1

Query: 82  DWSQRLSEDDAKPQATRRSDRKVKVNGS*SLESYTKVTTKISSEETDSAKK 234
           D S R+S+D +KP+   R D KVK   S   +S +     IS+ E    KK
Sbjct: 177 DTSARISDDKSKPRPASREDHKVKTVTSAEAKSASADNASISNSEKQEQKK 227


>tr|A3AJE0|A3AJE0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_010912 PE=4 SV=1
          Length = 535

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +1

Query: 82  DWSQRLSEDDAKPQATRRSDRKVKVNGS*SLESYTKVTTKISSEETDSAKK 234
           D S R+S+D +KP+   R D KVK   S   +S +     IS+ E    KK
Sbjct: 255 DTSARISDDKSKPRPASREDHKVKTVTSAEAKSASADNASISNSEKQEQKK 305


>tr|A7MBR7|A7MBR7_DANRE Putative uncharacterized protein (Fragment)
           OS=Danio rerio GN=brd3b PE=2 SV=1
          Length = 500

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
 Frame = +2

Query: 8   YAYQDAHGNEYHQGHDLVQTPMDGTTGVKDYLKMMQSLKLPEEVTEKSKSMGAKV*KATQ 187
           Y   DA   E H  H++++ PMD +T VK   K M S + P+     +++  A V     
Sbjct: 318 YKPVDAEALELHDYHEIIKQPMDLST-VK---KKMDSREYPD-----AQNFAADVRLMFS 368

Query: 188 RSPPKSPPKRQILPKSR--MDLLRSKVTQMQEDNAQQLQKSAVS 313
                +PP  +++  +R   D+   K  +M ++ A+    +AVS
Sbjct: 369 NCYKYNPPDHEVVAMARKLQDVFEMKFAKMPDEPAEPSSPNAVS 412


>tr|A5PN48|A5PN48_DANRE Novel protein (Zgc:77289) OS=Danio rerio
           GN=brd3b PE=4 SV=1
          Length = 664

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
 Frame = +2

Query: 8   YAYQDAHGNEYHQGHDLVQTPMDGTTGVKDYLKMMQSLKLPEEVTEKSKSMGAKV*KATQ 187
           Y   DA   E H  H++++ PMD +T VK   K M S + P+     +++  A V     
Sbjct: 318 YKPVDAEALELHDYHEIIKQPMDLST-VK---KKMDSREYPD-----AQNFAADVRLMFS 368

Query: 188 RSPPKSPPKRQILPKSR--MDLLRSKVTQMQEDNAQQLQKSAVS 313
                +PP  +++  +R   D+   K  +M ++ A+    +AVS
Sbjct: 369 NCYKYNPPDHEVVAMARKLQDVFEMKFAKMPDEPAEPSSPNAVS 412


>tr|A5PN47|A5PN47_DANRE Novel protein (Zgc:77289) OS=Danio rerio
           GN=brd3b PE=1 SV=1
          Length = 729

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
 Frame = +2

Query: 8   YAYQDAHGNEYHQGHDLVQTPMDGTTGVKDYLKMMQSLKLPEEVTEKSKSMGAKV*KATQ 187
           Y   DA   E H  H++++ PMD +T VK   K M S + P+     +++  A V     
Sbjct: 318 YKPVDAEALELHDYHEIIKQPMDLST-VK---KKMDSREYPD-----AQNFAADVRLMFS 368

Query: 188 RSPPKSPPKRQILPKSR--MDLLRSKVTQMQEDNAQQLQKSAVS 313
                +PP  +++  +R   D+   K  +M ++ A+    +AVS
Sbjct: 369 NCYKYNPPDHEVVAMARKLQDVFEMKFAKMPDEPAEPSSPNAVS 412