BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911602|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_H11.
         (316 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8AVB3|TRUA_STRGC tRNA pseudouridine synthase A OS=Streptococ...    30   2.8  
sp|Q9Z1K5|ARI1_MOUSE Protein ariadne-1 homolog OS=Mus musculus G...    30   4.8  
sp|Q9Y4X5|ARI1_HUMAN Protein ariadne-1 homolog OS=Homo sapiens G...    30   4.8  
sp|A2VEA3|ARI1_BOVIN Protein ariadne-1 homolog OS=Bos taurus GN=...    30   4.8  
sp|Q9M2Q6|SPL15_ARATH Squamosa promoter-binding-like protein 15 ...    29   6.3  
sp|O45211|TBP_BOMMO TATA-box-binding protein OS=Bombyx mori GN=T...    29   8.3  
sp|Q865K8|MPRA_PIG Membrane progestin receptor alpha OS=Sus scro...    29   8.3  
sp|P39060|COIA1_HUMAN Collagen alpha-1(XVIII) chain OS=Homo sapi...    29   8.3  

>sp|A8AVB3|TRUA_STRGC tRNA pseudouridine synthase A OS=Streptococcus
           gordonii (strain Challis / ATCC 35105 / CH1 / DL1 /
           V288) GN=truA PE=3 SV=1
          Length = 249

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
 Frame = +2

Query: 14  DIGPVSNPELRHSWQHH-----LSMLLSEVTDIQWKFDFCGF 124
           DIG   NP +RH   H+     LS+L   +T ++   DF GF
Sbjct: 116 DIGRPKNPMMRHYATHYPYPLELSLLEEAITQLEGTHDFTGF 157


>sp|Q9Z1K5|ARI1_MOUSE Protein ariadne-1 homolog OS=Mus musculus
           GN=Arih1 PE=2 SV=3
          Length = 555

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/80 (23%), Positives = 38/80 (47%)
 Frame = -2

Query: 243 QHQKRNARRQLICKKSRRLKTQSTLRLRQLKYKEVRCSM*KPQKSNFHWMSVTSLRSMLR 64
           Q + R A ++ +   +R +    +LR     Y +V+  M + Q+ N  W+ V  L+  + 
Sbjct: 402 QERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVD 461

Query: 63  *CCQLCLSSGLETGPISSYM 4
             CQ C ++ + T   + Y+
Sbjct: 462 VLCQ-CRATLMYTYVFAFYL 480


>sp|Q9Y4X5|ARI1_HUMAN Protein ariadne-1 homolog OS=Homo sapiens
           GN=ARIH1 PE=1 SV=2
          Length = 557

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/80 (23%), Positives = 38/80 (47%)
 Frame = -2

Query: 243 QHQKRNARRQLICKKSRRLKTQSTLRLRQLKYKEVRCSM*KPQKSNFHWMSVTSLRSMLR 64
           Q + R A ++ +   +R +    +LR     Y +V+  M + Q+ N  W+ V  L+  + 
Sbjct: 404 QERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVD 463

Query: 63  *CCQLCLSSGLETGPISSYM 4
             CQ C ++ + T   + Y+
Sbjct: 464 VLCQ-CRATLMYTYVFAFYL 482


>sp|A2VEA3|ARI1_BOVIN Protein ariadne-1 homolog OS=Bos taurus
           GN=ARIH1 PE=2 SV=1
          Length = 555

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/80 (23%), Positives = 38/80 (47%)
 Frame = -2

Query: 243 QHQKRNARRQLICKKSRRLKTQSTLRLRQLKYKEVRCSM*KPQKSNFHWMSVTSLRSMLR 64
           Q + R A ++ +   +R +    +LR     Y +V+  M + Q+ N  W+ V  L+  + 
Sbjct: 402 QERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVD 461

Query: 63  *CCQLCLSSGLETGPISSYM 4
             CQ C ++ + T   + Y+
Sbjct: 462 VLCQ-CRATLMYTYVFAFYL 480


>sp|Q9M2Q6|SPL15_ARATH Squamosa promoter-binding-like protein 15
           OS=Arabidopsis thaliana GN=SPL15 PE=2 SV=1
          Length = 354

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 252 SRMQHQKRNARRQLICKKSRRLKTQSTLRLRQLKYKEVRCSM 127
           S    +KR+ RR+L C   RR K Q T  L    Y  +  S+
Sbjct: 110 SEFDLEKRSCRRRLACHNERRRKPQPTTALFTSHYSRIAPSL 151


>sp|O45211|TBP_BOMMO TATA-box-binding protein OS=Bombyx mori GN=Tbp
           PE=2 SV=1
          Length = 307

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 121 FSHRASYFFVLQLPQPQGRLCLQPPRLLAYELSPRIPLLVLHPAPLTP 264
           ++  ASY    Q+ QPQ    +  P + A  LS +  L    PAP+TP
Sbjct: 73  YAPTASYATPQQMMQPQTPQNMMSPMIAAGNLSSQQMLSQASPAPMTP 120


>sp|Q865K8|MPRA_PIG Membrane progestin receptor alpha OS=Sus scrofa
           GN=PAQR7 PE=2 SV=1
          Length = 350

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = +1

Query: 97  PMEV*FLWFSHRAS-YFFVLQLPQPQGRLCLQPPRLLAY--ELSPRIPLLVLHPAPLT 261
           PM     W S   S Y   +Q P   GR C + P  LAY  ++SP    ++  P P T
Sbjct: 178 PMAAFLAWLSCTGSCYNKYIQKPGLLGRTCQEVPSALAYALDISPVAHRILASPEPAT 235


>sp|P39060|COIA1_HUMAN Collagen alpha-1(XVIII) chain OS=Homo sapiens
           GN=COL18A1 PE=1 SV=5
          Length = 1754

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 112 FLWFSHRASYFFVLQLPQPQGRLCLQPPRLLAYELSPRIPLLVLHPAPLTPHQDS 276
           +LWF++  +      +P+PQG L +QP       ++PR        AP +P   S
Sbjct: 30  WLWFNNEDTSHAATTIPEPQGPLPVQPTADTTTHVTPRNGSTEPATAPGSPEPPS 84

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911602|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_H11.
         (316 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******