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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911603
Clone id YMU001_000007_A02
Library
Length 511
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000007_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGAATCTGAGAAGAGGCCAAAGATGGGTCATGTGGTCCACATGTTAGAATCAGAAGATTG
TCCTTATCGGGATGCAAGGGCTCTGCTTTCTTGAGAAAGAAAGTATCATTTAACACGACT
CTCTGTGTGGGAGAAATCACAGATGGTTGCTAGGCGCAAATTTGTACAGTGAGTCTTTTA
CTTCCCTCGGTGCCATAACATAAATACATGTGTCGGCCTCCACAGGATGTACCATATCTA
GCAGGGTTCTTATCCTTCTGAAGCTATGGAATGGTGGGTTTAGCTGCAACCTTGGAGAAC
TCTGGAGTGTACATAATTAGAGATCTGGAAGAGGGTTTGGCCTGATTTGCAGGTGGATCT
TGAGCCCTCCTCATTGGGATAAGAAATGGCTTTACCCAAACAGGCCAATTGTATCGTTTC
ATGCAAGGAAATTTATGAAAACAGAGCCTTTGCCTTTCCCATTAGTTTCCCCTCTTGTGC
TGCTGGTTTAGACCTTTACTGGCATTACTGC
■■Homology search results ■■ -
sp_hit_id Q3EDL4
Definition sp|Q3EDL4|Y1154_ARATH Putative serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana
Align length 26
Score (bit) 43.9
E-value 0.0004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911603|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_A02.
         (511 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3EDL4|Y1154_ARATH Putative serine/threonine-protein kinase A...    44   4e-04
sp|A0M672|UVRC_GRAFK UvrABC system protein C OS=Gramella forseti...    33   0.77 
sp|P29168|GAG_MLVDE Gag polyprotein OS=Murine leukemia virus (st...    30   6.6  
sp|Q5WTW6|DUT_LEGPL Deoxyuridine 5'-triphosphate nucleotidohydro...    30   8.6  
sp|Q5ZSN0|DUT_LEGPH Deoxyuridine 5'-triphosphate nucleotidohydro...    30   8.6  
sp|A5IEX1|DUT_LEGPC Deoxyuridine 5'-triphosphate nucleotidohydro...    30   8.6  
sp|Q5X242|DUT_LEGPA Deoxyuridine 5'-triphosphate nucleotidohydro...    30   8.6  
sp|P59509|ATS19_MOUSE A disintegrin and metalloproteinase with t...    30   8.6  

>sp|Q3EDL4|Y1154_ARATH Putative serine/threonine-protein kinase
           At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2
          Length = 472

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +2

Query: 2   ESEKRPKMGHVVHMLESEDCPYRDAR 79
           ++ KRPKMGH++HMLE+ED  YRD R
Sbjct: 411 DANKRPKMGHIIHMLEAEDLLYRDER 436


>sp|A0M672|UVRC_GRAFK UvrABC system protein C OS=Gramella forsetii
           (strain KT0803) GN=uvrC PE=3 SV=1
          Length = 597

 Score = 33.1 bits (74), Expect = 0.77
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -1

Query: 274 PFHSFRRIRTLLDMVHPV-EADTCIYVMAPREVKDSLYKFAPSNHL 140
           PF SF+ + TLLD++  + +  TC Y +A  ++++  YK     HL
Sbjct: 130 PFTSFKTVNTLLDLIKGLYKLRTCNYDLAEDKIRNGKYKVCLEYHL 175


>sp|P29168|GAG_MLVDE Gag polyprotein OS=Murine leukemia virus
           (strain DEF27) GN=gag PE=3 SV=3
          Length = 536

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
 Frame = -3

Query: 413 YNWPVWVKPFLIP-----MRRAQDPPANQAKPSSRSLIMYTPEFSKVAAKP 276
           Y+ P WVKPF+ P           PP   A P SRS  +YT     +  KP
Sbjct: 91  YHPPPWVKPFVSPKPFPLSTLPFSPPGPSAHPPSRS-DLYTALIPSIKTKP 140


>sp|Q5WTW6|DUT_LEGPL Deoxyuridine 5'-triphosphate
           nucleotidohydrolase OS=Legionella pneumophila (strain
           Lens) GN=dut PE=3 SV=1
          Length = 152

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 197 YGTEGSKRLTVQICA*QPSVISPTQRVVLNDTFFLKKAEP 78
           Y T+GS  L +++C  +P  ++P Q V+L     +  A+P
Sbjct: 23  YATDGSAGLDLRVCISEPMQVAPQQTVLLPTGIAIYIADP 62


>sp|Q5ZSN0|DUT_LEGPH Deoxyuridine 5'-triphosphate
           nucleotidohydrolase OS=Legionella pneumophila subsp.
           pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
           7513) GN=dut PE=3 SV=2
          Length = 152

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 197 YGTEGSKRLTVQICA*QPSVISPTQRVVLNDTFFLKKAEP 78
           Y T+GS  L +++C  +P  ++P Q V+L     +  A+P
Sbjct: 23  YATDGSAGLDLRVCISEPMQVAPQQTVLLPTGIAIYIADP 62


>sp|A5IEX1|DUT_LEGPC Deoxyuridine 5'-triphosphate
           nucleotidohydrolase OS=Legionella pneumophila (strain
           Corby) GN=dut PE=3 SV=1
          Length = 152

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 197 YGTEGSKRLTVQICA*QPSVISPTQRVVLNDTFFLKKAEP 78
           Y T+GS  L +++C  +P  ++P Q V+L     +  A+P
Sbjct: 23  YATDGSAGLDLRVCISEPMQVAPQQAVLLPTGIAIYIADP 62


>sp|Q5X242|DUT_LEGPA Deoxyuridine 5'-triphosphate
           nucleotidohydrolase OS=Legionella pneumophila (strain
           Paris) GN=dut PE=3 SV=1
          Length = 152

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 197 YGTEGSKRLTVQICA*QPSVISPTQRVVLNDTFFLKKAEP 78
           Y T+GS  L +++C  +P  ++P Q V+L     +  A+P
Sbjct: 23  YATDGSAGLDLRVCISEPMQVAPQQTVLLPTGIAIYIADP 62


>sp|P59509|ATS19_MOUSE A disintegrin and metalloproteinase with
           thrombospondin motifs 19 OS=Mus musculus GN=Adamts19
           PE=2 SV=1
          Length = 1210

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 404 PVWVKPFLIPMRRAQDPPANQAKPSSRSLIMYTPEFSK 291
           P   +P L P R +  PPA Q +PS+  +++  P  S+
Sbjct: 140 PASWQPPLPPQRPSSPPPAQQEEPSAEEVLLRIPALSR 177
tr_hit_id B8A2A6
Definition tr|B8A2A6|B8A2A6_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 29
Score (bit) 46.2
E-value 0.001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911603|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_A02.
         (511 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8A2A6|B8A2A6_MAIZE Putative uncharacterized protein OS=Zea m...    46   0.001
tr|A7PLB5|A7PLB5_VITVI Chromosome chr7 scaffold_20, whole genome...    46   0.001
tr|B8AYK6|B8AYK6_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002
tr|Q4LB28|Q4LB28_ORYSA OSJNBa0042L16.18 protein (OSIGBa0093L02.8...    45   0.002
tr|Q0JD58|Q0JD58_ORYSJ Os04g0430000 protein (Fragment) OS=Oryza ...    45   0.002
tr|B6U1F5|B6U1F5_MAIZE BRASSINOSTEROID INSENSITIVE 1-associated ...    45   0.002
tr|B4G112|B4G112_MAIZE Putative uncharacterized protein OS=Zea m...    45   0.002
tr|A9TXD6|A9TXD6_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.002
tr|A3ATY7|A3ATY7_ORYSJ Putative uncharacterized protein OS=Oryza...    45   0.002
tr|A2XTJ4|A2XTJ4_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002
tr|A7NTY6|A7NTY6_VITVI Chromosome chr18 scaffold_1, whole genome...    45   0.003
tr|Q6I5K7|Q6I5K7_ORYSJ Os05g0436100 protein OS=Oryza sativa subs...    44   0.004
tr|A9U529|A9U529_PHYPA Predicted protein (Fragment) OS=Physcomit...    44   0.004
tr|A3B4D4|A3B4D4_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.004
tr|Q6Z107|Q6Z107_ORYSJ Os02g0549200 protein OS=Oryza sativa subs...    44   0.005
tr|Q570G5|Q570G5_ARATH Putative uncharacterized protein At1g0154...    44   0.005
tr|B8AJD0|B8AJD0_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.005
tr|A3A7V3|A3A7V3_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.005
tr|Q0JL16|Q0JL16_ORYSJ Os01g0631700 protein OS=Oryza sativa subs...    43   0.008
tr|B8ACA3|B8ACA3_ORYSI Putative uncharacterized protein OS=Oryza...    43   0.008
tr|B7ZXE8|B7ZXE8_MAIZE Putative uncharacterized protein OS=Zea m...    43   0.008
tr|O04601|O04601_ARATH A_IG002N01.22 protein (Putative uncharact...    43   0.010
tr|A2ZVP8|A2ZVP8_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.018
tr|A7PZL0|A7PZL0_VITVI Chromosome chr15 scaffold_40, whole genom...    42   0.023
tr|Q337H2|Q337H2_ORYSJ Os10g0497600 protein OS=Oryza sativa subs...    41   0.039
tr|Q6NKZ9|Q6NKZ9_ARATH At4g34500 OS=Arabidopsis thaliana GN=At4g...    40   0.067
tr|O65676|O65676_ARATH Putative serine/threonine protein kinase ...    40   0.067
tr|B4FWN5|B4FWN5_MAIZE Putative uncharacterized protein OS=Zea m...    40   0.067
tr|Q8W3E7|Q8W3E7_ORYSJ Putative kinase (Putative uncharacterized...    40   0.087
tr|Q8H846|Q8H846_ORYSJ Putative serine/threonine protein kinase ...    40   0.087

>tr|B8A2A6|B8A2A6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 365

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = +2

Query: 2   ESEKRPKMGHVVHMLESEDCPYRDARALL 88
           +S+KRPKMGHV+HMLE +D PYR+ R  L
Sbjct: 295 DSQKRPKMGHVIHMLEVDDFPYREDRRTL 323


>tr|A7PLB5|A7PLB5_VITVI Chromosome chr7 scaffold_20, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019508001
           PE=4 SV=1
          Length = 509

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = +2

Query: 5   SEKRPKMGHVVHMLESEDCPYRDAR 79
           S+KRPKMGHV+HMLE+E+ P+RD R
Sbjct: 432 SQKRPKMGHVIHMLEAEESPFRDDR 456


>tr|B8AYK6|B8AYK6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_20093 PE=4 SV=1
          Length = 515

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = +2

Query: 2   ESEKRPKMGHVVHMLESEDCPYRDAR 79
           +S+KRPKMGHV+HMLE +D PYR+ R
Sbjct: 448 DSQKRPKMGHVIHMLEVDDFPYREDR 473


>tr|Q4LB28|Q4LB28_ORYSA OSJNBa0042L16.18 protein (OSIGBa0093L02.8
           protein) (B0222C05.2 protein) OS=Oryza sativa
           GN=OSJNBa0042L16.18 PE=4 SV=1
          Length = 526

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 2   ESEKRPKMGHVVHMLESEDCPYRDAR 79
           E+ KRPK+GHV+HMLE +D PYRD R
Sbjct: 452 EARKRPKIGHVIHMLEVDDFPYRDER 477


>tr|Q0JD58|Q0JD58_ORYSJ Os04g0430000 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os04g0430000 PE=4 SV=1
          Length = 311

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 2   ESEKRPKMGHVVHMLESEDCPYRDAR 79
           E+ KRPK+GHV+HMLE +D PYRD R
Sbjct: 237 EARKRPKIGHVIHMLEVDDFPYRDER 262


>tr|B6U1F5|B6U1F5_MAIZE BRASSINOSTEROID INSENSITIVE 1-associated
           receptor kinase 1 OS=Zea mays PE=2 SV=1
          Length = 501

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 2   ESEKRPKMGHVVHMLESEDCPYRDAR 79
           E+ KRPK+GHV+HMLE +D PYRD R
Sbjct: 434 EARKRPKIGHVIHMLEVDDFPYRDER 459


>tr|B4G112|B4G112_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 501

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 2   ESEKRPKMGHVVHMLESEDCPYRDAR 79
           E+ KRPK+GHV+HMLE +D PYRD R
Sbjct: 434 EARKRPKIGHVIHMLEVDDFPYRDER 459


>tr|A9TXD6|A9TXD6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_172520 PE=4 SV=1
          Length = 484

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 22/42 (52%), Positives = 27/42 (64%)
 Frame = +2

Query: 11  KRPKMGHVVHMLESEDCPYRDARALLS*ERKYHLTRLSVWEK 136
           KRPKMGHVVHMLE+E+ P+RD R   S   + H T     E+
Sbjct: 395 KRPKMGHVVHMLEAEEFPFRDDRKAGSSHPRSHRTEAQNQER 436


>tr|A3ATY7|A3ATY7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_014259 PE=4 SV=1
          Length = 518

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 2   ESEKRPKMGHVVHMLESEDCPYRDAR 79
           E+ KRPK+GHV+HMLE +D PYRD R
Sbjct: 444 EARKRPKIGHVIHMLEVDDFPYRDER 469


>tr|A2XTJ4|A2XTJ4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_15929 PE=4 SV=1
          Length = 526

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 2   ESEKRPKMGHVVHMLESEDCPYRDAR 79
           E+ KRPK+GHV+HMLE +D PYRD R
Sbjct: 452 EARKRPKIGHVIHMLEVDDFPYRDER 477