NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911615
Clone id YMU001_000007_B04
Library
Length 359
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000007_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAGGAACTCAGTGATGACGCTGAAACTTTGAGATTGCAAGCTCGCAATCTGCAAGAGAAG
AATGACGAACTGTCGAAGCAAAATGAAGTCCTCGTTCCGAAACATATCCTGCCTTTTCAA
GACAGCCCAGATGGAAATAGCTCGGAAGGATAAGCAAATCAGAAGTCTTCAGCTAGAATC
TTTAGGTGCACGTGCTCCTGATCGTGACATGCCAAACCCCCTGAGCTCAAGAGCAGTGGC
AGTGGGAAAGCGACGACCAGACACTGATGTTAGTAACGAATGCAGAAAGCATGGCGCGTC
TGCGGTGGTGGCATCGAAGGCAGAGGGCAAGATCAATGAGCCTAAGACATCATCCTTGG
■■Homology search results ■■ -
sp_hit_id Q9WUF3
Definition sp|Q9WUF3|C8AP2_MOUSE CASP8-associated protein 2 OS=Mus musculus
Align length 34
Score (bit) 33.9
E-value 0.26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911615|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_B04.
         (359 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9WUF3|C8AP2_MOUSE CASP8-associated protein 2 OS=Mus musculus...    34   0.26 
sp|Q9UKL3|C8AP2_HUMAN CASP8-associated protein 2 OS=Homo sapiens...    32   1.00 
sp|Q09550|YQU3_CAEEL Uncharacterized protein F26C11.3 OS=Caenorh...    30   2.9  
sp|Q898P3|Y401_CLOTE UPF0371 protein CTC_00401 OS=Clostridium te...    30   3.8  
sp|Q811B1|XYLT1_MOUSE Xylosyltransferase 1 OS=Mus musculus GN=Xy...    30   4.9  
sp|Q9M0K4|LAF1_ARATH Transcription factor LAF1 OS=Arabidopsis th...    29   6.5  
sp|Q9GLK0|TGM1_CANFA Protein-glutamine gamma-glutamyltransferase...    29   8.4  
sp|Q9JKC9|SYNG_RAT AP1 subunit gamma-binding protein 1 OS=Rattus...    29   8.4  
sp|Q5SV85|SYNG_MOUSE AP1 subunit gamma-binding protein 1 OS=Mus ...    29   8.4  
sp|Q2T9P4|NASP_BOVIN Nuclear autoantigenic sperm protein OS=Bos ...    29   8.4  
sp|Q9ULV3|CIZ1_HUMAN Cip1-interacting zinc finger protein OS=Hom...    29   8.4  
sp|Q6PI77|BHLH9_HUMAN Protein BHLHB9 OS=Homo sapiens GN=BHLHB9 P...    29   8.4  

>sp|Q9WUF3|C8AP2_MOUSE CASP8-associated protein 2 OS=Mus musculus
           GN=Casp8ap2 PE=1 SV=1
          Length = 1962

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = +2

Query: 68  NCRSKMKSSFRNISCLFKTAQMEIARKDKQIRSL 169
           N +++ +S  +NIS L KTA++EI RKD++I  L
Sbjct: 103 NLKNENQSLKKNISALIKTARVEINRKDEEINHL 136


>sp|Q9UKL3|C8AP2_HUMAN CASP8-associated protein 2 OS=Homo sapiens
           GN=CASP8AP2 PE=1 SV=1
          Length = 1982

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
 Frame = +2

Query: 98  RNISCLFKTAQMEIARKDKQIRSL----------QLESLGARAPDRDMPNPLSSRA---- 235
           +NIS L KTA++EI RKD++I +L          +     AR  D      L SR+    
Sbjct: 113 KNISALIKTARVEINRKDEEISNLHQRLSEFPHFRNNHKTARTFDTVKTKDLKSRSPHLD 172

Query: 236 -VAVGKRRPDTDVSNECRKHGASAVVASKAEGKINEPKTSS 355
             +    R  +DVS +   H ++++   + EGK +  K S+
Sbjct: 173 DCSKTDHRAKSDVSKDV--HHSTSLPNLEKEGKPHSDKRST 211


>sp|Q09550|YQU3_CAEEL Uncharacterized protein F26C11.3
           OS=Caenorhabditis elegans GN=F26C11.3 PE=2 SV=3
          Length = 1317

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +2

Query: 50  CKRRMTNCRSKMKSSFRNISCLFKTAQMEIARKDKQIRSLQLESLGARAPDRDMPNPLSS 229
           C  ++T C SK    +RN++ L K  + E+ + D  + S   E+   +  DR+     SS
Sbjct: 128 CNLKVTECLSKQYEDWRNVT-LIKGYERELEKCDCVLTSSSTETGTVKFLDREFFRVFSS 186

Query: 230 RAVAVGKRRPDT 265
             +A     P T
Sbjct: 187 AEIASTTSLPTT 198


>sp|Q898P3|Y401_CLOTE UPF0371 protein CTC_00401 OS=Clostridium
           tetani GN=CTC_00401 PE=3 SV=2
          Length = 502

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 169 KTSDLLILPSYFHLGCLEKAGYVSERGLHFASTVRH 62
           K S+  I+  YF  GC  K GY+ +  LH +  + H
Sbjct: 297 KASEQEIIRRYFKTGCEYKKGYLDKETLHRSKIIMH 332


>sp|Q811B1|XYLT1_MOUSE Xylosyltransferase 1 OS=Mus musculus GN=Xylt1
           PE=2 SV=1
          Length = 953

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +1

Query: 37  QARNLQEKNDELSKQNEVLV----PKHILPFQDSPDGNSSEG 150
           Q  +LQ K D L K+    V    PK +LP ++   GNSS+G
Sbjct: 182 QKEHLQRKLDALDKRQGQSVLGKGPKEVLPPREKATGNSSQG 223


>sp|Q9M0K4|LAF1_ARATH Transcription factor LAF1 OS=Arabidopsis
           thaliana GN=LAF1 PE=1 SV=2
          Length = 283

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 146 KDKQIRSLQLESLGARAPDRDMPNPLSSRAVAVGKRRPDTDVSN 277
           K K ++S  L+   + +P    P+  SS  VA GKR P+T +SN
Sbjct: 111 KKKWLKSQSLQDAKSISP----PSSSSSSLVACGKRNPETLISN 150


>sp|Q9GLK0|TGM1_CANFA Protein-glutamine gamma-glutamyltransferase K
           OS=Canis familiaris GN=TGM1 PE=2 SV=1
          Length = 815

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +2

Query: 191 RAPDRDMPNPLSSRAVAVGKRRPDTDVSNECRKHGASAVVASKAEGKINE 340
           RA D   P P   R    G+RRPD+  S+  R    ++ V +  +G I E
Sbjct: 56  RADDDWGPEPHRDRGSGSGRRRPDSRGSDSRRPGSRASGVNAAGDGTIRE 105


>sp|Q9JKC9|SYNG_RAT AP1 subunit gamma-binding protein 1 OS=Rattus
            norvegicus GN=Ap1gbp1 PE=1 SV=3
          Length = 1329

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 18/117 (15%)
 Frame = +2

Query: 62   MTNCRSKMKSSFRNISCLFKTAQMEIARKDKQIRSLQLESLGARAPD-------RDMPNP 220
            + N +SKMKSS   I     T  + +    K+  SL  + +   +P        RD  N 
Sbjct: 1056 VANSQSKMKSSEEMIKSELATFDLSVQGSHKRSLSLGDKEISRSSPSPALEQPFRDRSNT 1115

Query: 221  LSSRAVAVGKRRPDTDVSNECRKH-----------GASAVVASKAEGKINEPKTSSL 358
            LS RA     R    D++ E  ++           G++  V  KA   +N   +S++
Sbjct: 1116 LSERAALPVIRDKYKDLTGEVEENERYAYEWQRCLGSALDVIKKANDTLNGISSSAV 1172


>sp|Q5SV85|SYNG_MOUSE AP1 subunit gamma-binding protein 1 OS=Mus
            musculus GN=Ap1gbp1 PE=1 SV=1
          Length = 1306

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 18/117 (15%)
 Frame = +2

Query: 62   MTNCRSKMKSSFRNISCLFKTAQMEIARKDKQIRSLQLESLGARAPD-------RDMPNP 220
            + N +SKMKSS   I     T  + +    K+  SL  + +   +P        RD  N 
Sbjct: 1033 VANSQSKMKSSEEMIKSELATFDLSVQGSHKRSLSLGDKEISRSSPSPALEQPFRDRSNT 1092

Query: 221  LSSRAVAVGKRRPDTDVSNECRKH-----------GASAVVASKAEGKINEPKTSSL 358
            LS RA     R    D++ E  ++           G++  V  KA   +N   +S++
Sbjct: 1093 LSERAALPVIRDKYKDLTGEVEENERYAYEWQRCLGSALDVIKKANDTLNGISSSAV 1149


>sp|Q2T9P4|NASP_BOVIN Nuclear autoantigenic sperm protein OS=Bos
           taurus GN=NASP PE=2 SV=2
          Length = 777

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +2

Query: 188 ARAPDRDMPNPLSSRAVAVGKRRPDTDVSNECRKHGASAVVASKAEGKINE 340
           ++ PD+++P     ++V+      +TDV  ECR+ G    V    E K  E
Sbjct: 229 SKKPDQEIPGAEEGKSVS------ETDVQEECREKGGQGEVIVSIEEKPKE 273
tr_hit_id A4S161
Definition tr|A4S161|A4S161_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901)
Align length 33
Score (bit) 37.7
E-value 0.29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911615|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_B04.
         (359 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4S161|A4S161_OSTLU Predicted protein OS=Ostreococcus lucimar...    38   0.29 
tr|Q5CV89|Q5CV89_CRYPV Putative uncharacterized protein OS=Crypt...    37   0.65 
tr|Q5CFX7|Q5CFX7_CRYHO Putative uncharacterized protein OS=Crypt...    37   0.65 
tr|A0NP94|A0NP94_9RHOB Mechanosensitive ion channel family prote...    35   1.9  
tr|Q3UQU1|Q3UQU1_MOUSE Putative uncharacterized protein (Fragmen...    34   4.2  
tr|Q3TNP9|Q3TNP9_MOUSE Putative uncharacterized protein (Fragmen...    34   4.2  
tr|B1AX75|B1AX75_MOUSE Caspase 8 associated protein 2 OS=Mus mus...    34   4.2  
tr|B1AX74|B1AX74_MOUSE Caspase 8 associated protein 2 OS=Mus mus...    34   4.2  
tr|Q5P3V2|Q5P3V2_AZOSE Transposition helper protein OS=Azoarcus ...    33   5.5  
tr|B6XVQ3|B6XVQ3_9BIFI Putative uncharacterized protein OS=Bifid...    33   5.5  
tr|A8IX28|A8IX28_CHLRE Predicted protein (Fragment) OS=Chlamydom...    33   5.5  
tr|B4S9M2|B4S9M2_PROA2 Putative uncharacterized protein OS=Prost...    33   7.2  

>tr|A4S161|A4S161_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_32985 PE=4 SV=1
          Length = 109

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = +2

Query: 74  RSKMKSSFRNISCLFKTAQMEIARKDKQIRSLQ 172
           R + ++  RNISCLF TA+ EI RKDK+I  L+
Sbjct: 62  RERCENLERNISCLFNTARGEIERKDKEIARLR 94


>tr|Q5CV89|Q5CV89_CRYPV Putative uncharacterized protein
           OS=Cryptosporidium parvum Iowa II GN=cgd8_4980 PE=4 SV=1
          Length = 126

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +2

Query: 56  RRMTNCRSKMKSSFRNISCLFKTAQMEIARKDKQIR 163
           RRM    ++++    NI CLFKTA+ EI RKDK I+
Sbjct: 72  RRMHGLENELQILTNNIYCLFKTAKEEIQRKDKLIQ 107


>tr|Q5CFX7|Q5CFX7_CRYHO Putative uncharacterized protein
           OS=Cryptosporidium hominis GN=Chro.80570 PE=4 SV=1
          Length = 125

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +2

Query: 56  RRMTNCRSKMKSSFRNISCLFKTAQMEIARKDKQIR 163
           RRM    ++++    NI CLFKTA+ EI RKDK I+
Sbjct: 71  RRMHGLENELQILTNNIYCLFKTAKEEIQRKDKLIQ 106


>tr|A0NP94|A0NP94_9RHOB Mechanosensitive ion channel family protein
           OS=Labrenzia aggregata IAM 12614 GN=SIAM614_18069 PE=4
           SV=1
          Length = 817

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = +2

Query: 41  LAICKRRMTNCRSKMKSSFRNISCLFKTAQMEIARKDKQIRSLQLESLGARAPDRDMPNP 220
           +A  ++ +TN  +   +  R  S +   A   I   DKQ+RS QL+ L  R P    P+ 
Sbjct: 121 VAARRKELTNELAIANAPVRRASEIHDEAVFFIREVDKQLRSRQLDKLFDRYPSPLAPST 180

Query: 221 LSSRAVAVGK--RRPDTDVSNECRKHGAS 301
            S+    +G+  RR + DV NE  +   S
Sbjct: 181 WSTGFQEIGQFFRRFERDVQNELARPSVS 209


>tr|Q3UQU1|Q3UQU1_MOUSE Putative uncharacterized protein (Fragment)
           OS=Mus musculus GN=Casp8ap2 PE=2 SV=1
          Length = 632

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = +2

Query: 68  NCRSKMKSSFRNISCLFKTAQMEIARKDKQIRSL 169
           N +++ +S  +NIS L KTA++EI RKD++I  L
Sbjct: 103 NLKNENQSLKKNISALIKTARVEINRKDEEINHL 136


>tr|Q3TNP9|Q3TNP9_MOUSE Putative uncharacterized protein (Fragment)
           OS=Mus musculus GN=Casp8ap2 PE=2 SV=1
          Length = 251

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = +2

Query: 68  NCRSKMKSSFRNISCLFKTAQMEIARKDKQIRSL 169
           N +++ +S  +NIS L KTA++EI RKD++I  L
Sbjct: 17  NLKNENQSLKKNISALIKTARVEINRKDEEINHL 50


>tr|B1AX75|B1AX75_MOUSE Caspase 8 associated protein 2 OS=Mus
           musculus GN=Casp8ap2 PE=4 SV=1
          Length = 190

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = +2

Query: 68  NCRSKMKSSFRNISCLFKTAQMEIARKDKQIRSL 169
           N +++ +S  +NIS L KTA++EI RKD++I  L
Sbjct: 103 NLKNENQSLKKNISALIKTARVEINRKDEEINHL 136


>tr|B1AX74|B1AX74_MOUSE Caspase 8 associated protein 2 OS=Mus
           musculus GN=Casp8ap2 PE=2 SV=1
          Length = 1962

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = +2

Query: 68  NCRSKMKSSFRNISCLFKTAQMEIARKDKQIRSL 169
           N +++ +S  +NIS L KTA++EI RKD++I  L
Sbjct: 103 NLKNENQSLKKNISALIKTARVEINRKDEEINHL 136


>tr|Q5P3V2|Q5P3V2_AZOSE Transposition helper protein OS=Azoarcus sp.
           (strain EbN1) GN=istB PE=4 SV=1
          Length = 126

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +2

Query: 122 TAQMEIARKDKQIRSL----QLESLGARAPDRDMPNPLSSRAVAVGKRRP 259
           TA M+ A K    R      Q  S GAR P R  P P + RA A G RRP
Sbjct: 44  TAAMDEASKSAWCRENGVYPQSSSNGARRPHRRWPTPKTRRAPATGNRRP 93


>tr|B6XVQ3|B6XVQ3_9BIFI Putative uncharacterized protein
           OS=Bifidobacterium catenulatum DSM 16992 GN=BIFCAT_01319
           PE=4 SV=1
          Length = 512

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
 Frame = +1

Query: 7   LSDDAETLRLQARNLQEKNDELSKQNEVLVPKHIL------PFQDSPDGNSSEG*ANQKS 168
           +SD+   L+ QA N+    + L     V +PKH+L      P Q     N+S+  +N+KS
Sbjct: 424 ISDEVRQLQEQAYNISRSEESLESNETVAIPKHVLDKTEHKPLQGLESENTSQE-SNEKS 482

Query: 169 SA 174
            +
Sbjct: 483 ES 484