BP911617
Clone id YMU001_000007_B06
Library
Length 476
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000007_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGAGCTTTGAAGAGAGCGAGGAAGATTACGACATTCTTACAGCAAGATGAGTGGGAGGAA
GAAAAAGCAATAGTCTTGTCAGATGATCTGGAAAGGAAAGAGGAAGAACAGGTCGAGGAA
AGACATGAGCTTTTGCGGGGCTCCTGGGAAGATGTATATAAAGTTGTGAAGAAAATGGAG
AGGTTGAAAAACACAGAGCTTCATGAACGTGATGATGGAGAACTCGAGAGAACGGGTCAG
CCTATATGTATTTATGAGCCCTACTATGGCATCGGTGCTTCTGTCTTTGTGCATCAAAAT
GATCCTACCTACCGGGGTGTGAGTTTGCTATCAAGGCAAAAACGACCTGTACACGATGAC
ATAGATGTGGCTGTCCGCCTCCCATTACTAAACAACACATATTATGAAGAAGTCTTGTGT
GAATTTGGAGCATTGTTTGCCATTGCAAATCGCATTGATAGAGTGCATAAGAACTC
■■Homology search results ■■ -
sp_hit_id P34241
Definition sp|P34241|URB1_YEAST Nucleolar pre-ribosomal-associated protein 1 OS=Saccharomyces cerevisiae
Align length 27
Score (bit) 30.8
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911617|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_B06.
(476 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P34241|URB1_YEAST Nucleolar pre-ribosomal-associated protein ... 31 3.2
sp|P05825|FEPA_ECOLI Ferrienterobactin receptor OS=Escherichia c... 30 5.5
sp|P20587|PYHD_NPVLD Polyhedrin OS=Lymantria dispar multicapsid ... 30 7.2
sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1... 30 7.2

>sp|P34241|URB1_YEAST Nucleolar pre-ribosomal-associated protein 1
OS=Saccharomyces cerevisiae GN=URB1 PE=1 SV=2
Length = 1764

Score = 30.8 bits (68), Expect = 3.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1

Query: 4 ALKRARKITTFLQQDEWEEEKAIVLSD 84
ALK+ K++TF Q W EK I+L++
Sbjct: 457 ALKKLEKVSTFYDQKGWRNEKTILLNE 483


>sp|P05825|FEPA_ECOLI Ferrienterobactin receptor OS=Escherichia coli
(strain K12) GN=fepA PE=1 SV=2
Length = 746

Score = 30.0 bits (66), Expect = 5.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1

Query: 464 TLSMRFAMANNAPNSHKTSS*YVLFSNGRRTATSMSSC 351
TL M A A AP+ ++T+ Y+L+S G+ S C
Sbjct: 479 TLKMGIARAYKAPSLYQTNPNYILYSKGQGCYASAGGC 516


>sp|P20587|PYHD_NPVLD Polyhedrin OS=Lymantria dispar multicapsid
nuclear polyhedrosis virus GN=PH PE=3 SV=2
Length = 245

Score = 29.6 bits (65), Expect = 7.2
Identities = 12/44 (27%), Positives = 27/44 (61%)
Frame = +1

Query: 145 WEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIG 276
++++ V+K+ +R K+ E HE ++ L+ + + +P+YG G
Sbjct: 22 YKNLGTVIKQAKRQKHLEQHEIEERSLDHLDRYLVAEDPFYGPG 65


>sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1
SV=2
Length = 3256

Score = 29.6 bits (65), Expect = 7.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -1

Query: 455 MRFAMANNAPNSHKTSS*YVLFSNGRRTATSMSSCTGRFCLDSKLTPR 312
++++ N+P HK L++ GRR + ++ G D LTPR
Sbjct: 349 VQYSQQQNSPQKHKNKD---LYTTGRRESVNLGKSEGFKAGDKTLTPR 393


tr_hit_id Q0JL56
Definition tr|Q0JL56|Q0JL56_ORYSJ Os01g0622000 protein OS=Oryza sativa subsp. japonica
Align length 153
Score (bit) 151.0
E-value 2.0e-35
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911617|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_B06.
(476 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0JL56|Q0JL56_ORYSJ Os01g0622000 protein OS=Oryza sativa subs... 151 2e-35
tr|Q9M147|Q9M147_ARATH Putative uncharacterized protein AT4g0121... 150 3e-35
tr|O04612|O04612_ARATH A_IG002N01.24 protein OS=Arabidopsis thal... 150 3e-35
tr|A7PZP8|A7PZP8_VITVI Chromosome chr15 scaffold_40, whole genom... 150 3e-35
tr|A5AR14|A5AR14_VITVI Putative uncharacterized protein OS=Vitis... 150 3e-35
tr|A2ZVI3|A2ZVI3_ORYSJ Putative uncharacterized protein OS=Oryza... 146 6e-34
tr|A9TUR7|A9TUR7_PHYPA Predicted protein (Fragment) OS=Physcomit... 134 3e-30
tr|Q9LZ77|Q9LZ77_ARATH Putative uncharacterized protein T32M21_8... 128 1e-28
tr|Q940Y7|Q940Y7_ARATH AT5g04480/T32M21_80 OS=Arabidopsis thalia... 128 1e-28
tr|Q9AV30|Q9AV30_ORYSJ Os10g0546200 protein OS=Oryza sativa subs... 127 2e-28
tr|B8BI37|B8BI37_ORYSI Putative uncharacterized protein OS=Oryza... 127 2e-28
tr|A3C710|A3C710_ORYSJ Putative uncharacterized protein OS=Oryza... 127 2e-28
tr|A7PHU4|A7PHU4_VITVI Chromosome chr13 scaffold_17, whole genom... 123 5e-27
tr|A5B8M2|A5B8M2_VITVI Putative uncharacterized protein OS=Vitis... 123 5e-27
tr|A9RTD5|A9RTD5_PHYPA Predicted protein OS=Physcomitrella paten... 119 8e-26
tr|B8ABY0|B8ABY0_ORYSI Putative uncharacterized protein OS=Oryza... 72 1e-11
tr|B8P5I6|B8P5I6_9APHY Predicted protein OS=Postia placenta Mad-... 33 5.4
tr|B5XXX0|B5XXX0_KLEP3 Ferrienterobactin receptor OS=Klebsiella ... 33 9.2
tr|A6TGW9|A6TGW9_KLEP7 Outer membrane porin, receptor for ferric... 33 9.2
tr|B0X7B7|B0X7B7_CULQU 26S protease regulatory subunit 6A-A OS=C... 33 9.2

>tr|Q0JL56|Q0JL56_ORYSJ Os01g0622000 protein OS=Oryza sativa subsp.
japonica GN=Os01g0622000 PE=4 SV=1
Length = 911

Score = 151 bits (381), Expect = 2e-35
Identities = 77/153 (50%), Positives = 102/153 (66%)
Frame = +1

Query: 16 ARKITTFLQQDEWEEEKAIVLSDDXXXXXXXXXXXXXXXXXGSWEDVYKVVKKMERLKNT 195
A KI WEEE+A +++ G+WE+VY+ VK++ER+KN
Sbjct: 466 ASKIDDTFSLMAWEEERADEIANIKKRLEEEELKERSEQPHGTWEEVYRNVKRVERMKN- 524

Query: 196 ELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRGVSLLSRQKRPVHDDIDVAV 375
+LHERDD ELERTGQP+ IYEP++G G F+H++ YRG+ L S+ +RP DDID +
Sbjct: 525 DLHERDDKELERTGQPLSIYEPFFGEGTWPFLHRSS-LYRGIGLSSKGRRPGADDIDASS 583

Query: 376 RLPLLNNTYYEEVLCEFGALFAIANRIDRVHKN 474
RLPLLNN YY ++L EFGA FA+ANRIDR+HKN
Sbjct: 584 RLPLLNNGYYRDILGEFGAFFALANRIDRIHKN 616


>tr|Q9M147|Q9M147_ARATH Putative uncharacterized protein AT4g01210
OS=Arabidopsis thaliana GN=At4g01210 PE=2 SV=1
Length = 963

Score = 150 bits (379), Expect = 3e-35
Identities = 73/141 (51%), Positives = 94/141 (66%)
Frame = +1

Query: 52 WEEEKAIVLSDDXXXXXXXXXXXXXXXXXGSWEDVYKVVKKMERLKNTELHERDDGELER 231
WEEE+ + + + G+WEDVYK K+ +R KN +LHERD+GEL R
Sbjct: 579 WEEERYLQMMNSKKRREDEELKSRVLQYRGTWEDVYKSAKRADRSKN-DLHERDEGELLR 637

Query: 232 TGQPICIYEPYYGIGASVFVHQNDPTYRGVSLLSRQKRPVHDDIDVAVRLPLLNNTYYEE 411
TGQP+CIYEPY+G G F+HQ DP YRGV L + +RP DD+D + RLPL NN YY +
Sbjct: 638 TGQPLCIYEPYFGEGTWSFLHQ-DPLYRGVGLSVKGRRPRMDDVDASSRLPLFNNPYYRD 696

Query: 412 VLCEFGALFAIANRIDRVHKN 474
L +FGA FAI+N+IDR+HKN
Sbjct: 697 ALGDFGAFFAISNKIDRLHKN 717


>tr|O04612|O04612_ARATH A_IG002N01.24 protein OS=Arabidopsis
thaliana GN=A_IG002N01.24 PE=4 SV=1
Length = 981

Score = 150 bits (379), Expect = 3e-35
Identities = 73/141 (51%), Positives = 94/141 (66%)
Frame = +1

Query: 52 WEEEKAIVLSDDXXXXXXXXXXXXXXXXXGSWEDVYKVVKKMERLKNTELHERDDGELER 231
WEEE+ + + + G+WEDVYK K+ +R KN +LHERD+GEL R
Sbjct: 503 WEEERYLQMMNSKKRREDEELKSRVLQYRGTWEDVYKSAKRADRSKN-DLHERDEGELLR 561

Query: 232 TGQPICIYEPYYGIGASVFVHQNDPTYRGVSLLSRQKRPVHDDIDVAVRLPLLNNTYYEE 411
TGQP+CIYEPY+G G F+HQ DP YRGV L + +RP DD+D + RLPL NN YY +
Sbjct: 562 TGQPLCIYEPYFGEGTWSFLHQ-DPLYRGVGLSVKGRRPRMDDVDASSRLPLFNNPYYRD 620

Query: 412 VLCEFGALFAIANRIDRVHKN 474
L +FGA FAI+N+IDR+HKN
Sbjct: 621 ALGDFGAFFAISNKIDRLHKN 641


>tr|A7PZP8|A7PZP8_VITVI Chromosome chr15 scaffold_40, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00026958001
PE=4 SV=1
Length = 1026

Score = 150 bits (379), Expect = 3e-35
Identities = 74/141 (52%), Positives = 93/141 (65%)
Frame = +1

Query: 52 WEEEKAIVLSDDXXXXXXXXXXXXXXXXXGSWEDVYKVVKKMERLKNTELHERDDGELER 231
WEEEK I +++ GSWEDVY+ K+ +R KN +LHERDDGELER
Sbjct: 598 WEEEKLIGIANAKKRREEDELKDRTDQPRGSWEDVYRSAKRADRAKN-DLHERDDGELER 656

Query: 232 TGQPICIYEPYYGIGASVFVHQNDPTYRGVSLLSRQKRPVHDDIDVAVRLPLLNNTYYEE 411
TGQP+CIYEPY+G G F+H YRG+ L ++ +R DDID RLPLLNN YY +
Sbjct: 657 TGQPLCIYEPYFGEGTWPFLHATS-LYRGIGLSTKGRRREADDIDAPSRLPLLNNPYYRD 715

Query: 412 VLCEFGALFAIANRIDRVHKN 474
L E+GA FAIANR+DR+H+N
Sbjct: 716 ALGEYGAFFAIANRVDRIHRN 736


>tr|A5AR14|A5AR14_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_003086 PE=4 SV=1
Length = 1040

Score = 150 bits (379), Expect = 3e-35
Identities = 74/141 (52%), Positives = 93/141 (65%)
Frame = +1

Query: 52 WEEEKAIVLSDDXXXXXXXXXXXXXXXXXGSWEDVYKVVKKMERLKNTELHERDDGELER 231
WEEEK I +++ GSWEDVY+ K+ +R KN +LHERDDGELER
Sbjct: 612 WEEEKLIGIANAKKRREEDELKDRTDQPRGSWEDVYRSAKRADRAKN-DLHERDDGELER 670

Query: 232 TGQPICIYEPYYGIGASVFVHQNDPTYRGVSLLSRQKRPVHDDIDVAVRLPLLNNTYYEE 411
TGQP+CIYEPY+G G F+H YRG+ L ++ +R DDID RLPLLNN YY +
Sbjct: 671 TGQPLCIYEPYFGEGTWPFLHATS-LYRGIGLSTKGRRREADDIDAPSRLPLLNNPYYRD 729

Query: 412 VLCEFGALFAIANRIDRVHKN 474
L E+GA FAIANR+DR+H+N
Sbjct: 730 ALGEYGAFFAIANRVDRIHRN 750


>tr|A2ZVI3|A2ZVI3_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_002555 PE=4 SV=1
Length = 1029

Score = 146 bits (368), Expect = 6e-34
Identities = 69/112 (61%), Positives = 90/112 (80%)
Frame = +1

Query: 139 GSWEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRG 318
G+WE+VY+ VK++ER+KN +LHERDD ELERTGQP+ IYEP++G G F+H++ YRG
Sbjct: 660 GTWEEVYRNVKRVERMKN-DLHERDDKELERTGQPLSIYEPFFGEGTWPFLHRSS-LYRG 717

Query: 319 VSLLSRQKRPVHDDIDVAVRLPLLNNTYYEEVLCEFGALFAIANRIDRVHKN 474
+ L S+ +RP DDID + RLPLLNN YY ++L EFGA FA+ANRIDR+HKN
Sbjct: 718 IGLSSKGRRPGADDIDASSRLPLLNNGYYRDILGEFGAFFALANRIDRIHKN 769


>tr|A9TUR7|A9TUR7_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_493
PE=4 SV=1
Length = 869

Score = 134 bits (336), Expect = 3e-30
Identities = 64/112 (57%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Frame = +1

Query: 142 SWEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRGV 321
+WED+ K+VKK E K+ +L ER D E++R+GQP+CIYEPY+G GA F+H + YR +
Sbjct: 522 TWEDISKMVKKTEVHKD-DLKERSDAEIQRSGQPLCIYEPYHGTGAWPFLHDENTLYRAI 580

Query: 322 SLLSRQKRPVHDDIDVAVRLP-LLNNTYYEEVLCEFGALFAIANRIDRVHKN 474
SL + +RP DD+D RLP LLN++YY VLCEFG FAIANRID VHKN
Sbjct: 581 SLSTHARRPTDDDVDAQERLPGLLNDSYYRNVLCEFGTFFAIANRIDVVHKN 632


>tr|Q9LZ77|Q9LZ77_ARATH Putative uncharacterized protein T32M21_80
OS=Arabidopsis thaliana GN=T32M21_80 PE=4 SV=1
Length = 1091

Score = 128 bits (322), Expect = 1e-28
Identities = 58/108 (53%), Positives = 82/108 (75%)
Frame = +1

Query: 145 WEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRGVS 324
WE++Y+ +K E+LK E++ERD+GELERTG+P+CIYE Y G GA F+H YRG+S
Sbjct: 705 WEEIYRNARKSEKLK-FEVNERDEGELERTGEPLCIYEIYNGAGAWPFLHHGS-LYRGLS 762

Query: 325 LLSRQKRPVHDDIDVAVRLPLLNNTYYEEVLCEFGALFAIANRIDRVH 468
L S+ +R DD+D A RLPLLN+TYY ++LCE G +F++AN++D +H
Sbjct: 763 LSSKDRRLSSDDVDAADRLPLLNDTYYRDILCEIGGMFSVANKVDSIH 810


>tr|Q940Y7|Q940Y7_ARATH AT5g04480/T32M21_80 OS=Arabidopsis thaliana
GN=At5g04480 PE=2 SV=1
Length = 1050

Score = 128 bits (322), Expect = 1e-28
Identities = 58/108 (53%), Positives = 82/108 (75%)
Frame = +1

Query: 145 WEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRGVS 324
WE++Y+ +K E+LK E++ERD+GELERTG+P+CIYE Y G GA F+H YRG+S
Sbjct: 664 WEEIYRNARKSEKLK-FEVNERDEGELERTGEPLCIYEIYNGAGAWPFLHHGS-LYRGLS 721

Query: 325 LLSRQKRPVHDDIDVAVRLPLLNNTYYEEVLCEFGALFAIANRIDRVH 468
L S+ +R DD+D A RLPLLN+TYY ++LCE G +F++AN++D +H
Sbjct: 722 LSSKDRRLSSDDVDAADRLPLLNDTYYRDILCEIGGMFSVANKVDSIH 769


>tr|Q9AV30|Q9AV30_ORYSJ Os10g0546200 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0001O14.15 PE=4 SV=1
Length = 1012

Score = 127 bits (320), Expect = 2e-28
Identities = 63/110 (57%), Positives = 79/110 (71%)
Frame = +1

Query: 142 SWEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRGV 321
SW++VYK +K ERLK E +ERD+GELERTGQP+CIYE Y G GA F+H YRG+
Sbjct: 632 SWDEVYKNARKSERLK-PEGNERDEGELERTGQPVCIYEIYSGEGAWPFLHHGS-LYRGI 689

Query: 322 SLLSRQKRPVHDDIDVAVRLPLLNNTYYEEVLCEFGALFAIANRIDRVHK 471
+L +RP DD+D L +L+N YY + LCEFGA+FA+ANRID VHK
Sbjct: 690 TLSKGGRRPRSDDVDAVTHLSVLDNPYYSDRLCEFGAMFAVANRIDAVHK 739