BP911617 |
Clone id |
YMU001_000007_B06 |
Library |
YMU01 |
Length |
476 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000007_B06. |
Accession |
BP911617 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2648Contig1 |
Sequence |
AGAGCTTTGAAGAGAGCGAGGAAGATTACGACATTCTTACAGCAAGATGAGTGGGAGGAA GAAAAAGCAATAGTCTTGTCAGATGATCTGGAAAGGAAAGAGGAAGAACAGGTCGAGGAA AGACATGAGCTTTTGCGGGGCTCCTGGGAAGATGTATATAAAGTTGTGAAGAAAATGGAG AGGTTGAAAAACACAGAGCTTCATGAACGTGATGATGGAGAACTCGAGAGAACGGGTCAG CCTATATGTATTTATGAGCCCTACTATGGCATCGGTGCTTCTGTCTTTGTGCATCAAAAT GATCCTACCTACCGGGGTGTGAGTTTGCTATCAAGGCAAAAACGACCTGTACACGATGAC ATAGATGTGGCTGTCCGCCTCCCATTACTAAACAACACATATTATGAAGAAGTCTTGTGT GAATTTGGAGCATTGTTTGCCATTGCAAATCGCATTGATAGAGTGCATAAGAACTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P34241 |
Definition |
sp|P34241|URB1_YEAST Nucleolar pre-ribosomal-associated protein 1 OS=Saccharomyces cerevisiae |
Align length |
27 |
Score (bit) |
30.8 |
E-value |
3.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0JL56 |
Definition |
tr|Q0JL56|Q0JL56_ORYSJ Os01g0622000 protein OS=Oryza sativa subsp. japonica |
Align length |
153 |
Score (bit) |
151.0 |
E-value |
2.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911617|Adiantum capillus-veneris mRNA, clone: YMU001_000007_B06. (476 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0JL56|Q0JL56_ORYSJ Os01g0622000 protein OS=Oryza sativa subs... 151 2e-35 tr|Q9M147|Q9M147_ARATH Putative uncharacterized protein AT4g0121... 150 3e-35 tr|O04612|O04612_ARATH A_IG002N01.24 protein OS=Arabidopsis thal... 150 3e-35 tr|A7PZP8|A7PZP8_VITVI Chromosome chr15 scaffold_40, whole genom... 150 3e-35 tr|A5AR14|A5AR14_VITVI Putative uncharacterized protein OS=Vitis... 150 3e-35 tr|A2ZVI3|A2ZVI3_ORYSJ Putative uncharacterized protein OS=Oryza... 146 6e-34 tr|A9TUR7|A9TUR7_PHYPA Predicted protein (Fragment) OS=Physcomit... 134 3e-30 tr|Q9LZ77|Q9LZ77_ARATH Putative uncharacterized protein T32M21_8... 128 1e-28 tr|Q940Y7|Q940Y7_ARATH AT5g04480/T32M21_80 OS=Arabidopsis thalia... 128 1e-28 tr|Q9AV30|Q9AV30_ORYSJ Os10g0546200 protein OS=Oryza sativa subs... 127 2e-28 tr|B8BI37|B8BI37_ORYSI Putative uncharacterized protein OS=Oryza... 127 2e-28 tr|A3C710|A3C710_ORYSJ Putative uncharacterized protein OS=Oryza... 127 2e-28 tr|A7PHU4|A7PHU4_VITVI Chromosome chr13 scaffold_17, whole genom... 123 5e-27 tr|A5B8M2|A5B8M2_VITVI Putative uncharacterized protein OS=Vitis... 123 5e-27 tr|A9RTD5|A9RTD5_PHYPA Predicted protein OS=Physcomitrella paten... 119 8e-26 tr|B8ABY0|B8ABY0_ORYSI Putative uncharacterized protein OS=Oryza... 72 1e-11 tr|B8P5I6|B8P5I6_9APHY Predicted protein OS=Postia placenta Mad-... 33 5.4 tr|B5XXX0|B5XXX0_KLEP3 Ferrienterobactin receptor OS=Klebsiella ... 33 9.2 tr|A6TGW9|A6TGW9_KLEP7 Outer membrane porin, receptor for ferric... 33 9.2 tr|B0X7B7|B0X7B7_CULQU 26S protease regulatory subunit 6A-A OS=C... 33 9.2
>tr|Q0JL56|Q0JL56_ORYSJ Os01g0622000 protein OS=Oryza sativa subsp. japonica GN=Os01g0622000 PE=4 SV=1 Length = 911
Score = 151 bits (381), Expect = 2e-35 Identities = 77/153 (50%), Positives = 102/153 (66%) Frame = +1
Query: 16 ARKITTFLQQDEWEEEKAIVLSDDXXXXXXXXXXXXXXXXXGSWEDVYKVVKKMERLKNT 195 A KI WEEE+A +++ G+WE+VY+ VK++ER+KN Sbjct: 466 ASKIDDTFSLMAWEEERADEIANIKKRLEEEELKERSEQPHGTWEEVYRNVKRVERMKN- 524
Query: 196 ELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRGVSLLSRQKRPVHDDIDVAV 375 +LHERDD ELERTGQP+ IYEP++G G F+H++ YRG+ L S+ +RP DDID + Sbjct: 525 DLHERDDKELERTGQPLSIYEPFFGEGTWPFLHRSS-LYRGIGLSSKGRRPGADDIDASS 583
Query: 376 RLPLLNNTYYEEVLCEFGALFAIANRIDRVHKN 474 RLPLLNN YY ++L EFGA FA+ANRIDR+HKN Sbjct: 584 RLPLLNNGYYRDILGEFGAFFALANRIDRIHKN 616
>tr|Q9M147|Q9M147_ARATH Putative uncharacterized protein AT4g01210 OS=Arabidopsis thaliana GN=At4g01210 PE=2 SV=1 Length = 963
Score = 150 bits (379), Expect = 3e-35 Identities = 73/141 (51%), Positives = 94/141 (66%) Frame = +1
Query: 52 WEEEKAIVLSDDXXXXXXXXXXXXXXXXXGSWEDVYKVVKKMERLKNTELHERDDGELER 231 WEEE+ + + + G+WEDVYK K+ +R KN +LHERD+GEL R Sbjct: 579 WEEERYLQMMNSKKRREDEELKSRVLQYRGTWEDVYKSAKRADRSKN-DLHERDEGELLR 637
Query: 232 TGQPICIYEPYYGIGASVFVHQNDPTYRGVSLLSRQKRPVHDDIDVAVRLPLLNNTYYEE 411 TGQP+CIYEPY+G G F+HQ DP YRGV L + +RP DD+D + RLPL NN YY + Sbjct: 638 TGQPLCIYEPYFGEGTWSFLHQ-DPLYRGVGLSVKGRRPRMDDVDASSRLPLFNNPYYRD 696
Query: 412 VLCEFGALFAIANRIDRVHKN 474 L +FGA FAI+N+IDR+HKN Sbjct: 697 ALGDFGAFFAISNKIDRLHKN 717
>tr|O04612|O04612_ARATH A_IG002N01.24 protein OS=Arabidopsis thaliana GN=A_IG002N01.24 PE=4 SV=1 Length = 981
Score = 150 bits (379), Expect = 3e-35 Identities = 73/141 (51%), Positives = 94/141 (66%) Frame = +1
Query: 52 WEEEKAIVLSDDXXXXXXXXXXXXXXXXXGSWEDVYKVVKKMERLKNTELHERDDGELER 231 WEEE+ + + + G+WEDVYK K+ +R KN +LHERD+GEL R Sbjct: 503 WEEERYLQMMNSKKRREDEELKSRVLQYRGTWEDVYKSAKRADRSKN-DLHERDEGELLR 561
Query: 232 TGQPICIYEPYYGIGASVFVHQNDPTYRGVSLLSRQKRPVHDDIDVAVRLPLLNNTYYEE 411 TGQP+CIYEPY+G G F+HQ DP YRGV L + +RP DD+D + RLPL NN YY + Sbjct: 562 TGQPLCIYEPYFGEGTWSFLHQ-DPLYRGVGLSVKGRRPRMDDVDASSRLPLFNNPYYRD 620
Query: 412 VLCEFGALFAIANRIDRVHKN 474 L +FGA FAI+N+IDR+HKN Sbjct: 621 ALGDFGAFFAISNKIDRLHKN 641
>tr|A7PZP8|A7PZP8_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026958001 PE=4 SV=1 Length = 1026
Score = 150 bits (379), Expect = 3e-35 Identities = 74/141 (52%), Positives = 93/141 (65%) Frame = +1
Query: 52 WEEEKAIVLSDDXXXXXXXXXXXXXXXXXGSWEDVYKVVKKMERLKNTELHERDDGELER 231 WEEEK I +++ GSWEDVY+ K+ +R KN +LHERDDGELER Sbjct: 598 WEEEKLIGIANAKKRREEDELKDRTDQPRGSWEDVYRSAKRADRAKN-DLHERDDGELER 656
Query: 232 TGQPICIYEPYYGIGASVFVHQNDPTYRGVSLLSRQKRPVHDDIDVAVRLPLLNNTYYEE 411 TGQP+CIYEPY+G G F+H YRG+ L ++ +R DDID RLPLLNN YY + Sbjct: 657 TGQPLCIYEPYFGEGTWPFLHATS-LYRGIGLSTKGRRREADDIDAPSRLPLLNNPYYRD 715
Query: 412 VLCEFGALFAIANRIDRVHKN 474 L E+GA FAIANR+DR+H+N Sbjct: 716 ALGEYGAFFAIANRVDRIHRN 736
>tr|A5AR14|A5AR14_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003086 PE=4 SV=1 Length = 1040
Score = 150 bits (379), Expect = 3e-35 Identities = 74/141 (52%), Positives = 93/141 (65%) Frame = +1
Query: 52 WEEEKAIVLSDDXXXXXXXXXXXXXXXXXGSWEDVYKVVKKMERLKNTELHERDDGELER 231 WEEEK I +++ GSWEDVY+ K+ +R KN +LHERDDGELER Sbjct: 612 WEEEKLIGIANAKKRREEDELKDRTDQPRGSWEDVYRSAKRADRAKN-DLHERDDGELER 670
Query: 232 TGQPICIYEPYYGIGASVFVHQNDPTYRGVSLLSRQKRPVHDDIDVAVRLPLLNNTYYEE 411 TGQP+CIYEPY+G G F+H YRG+ L ++ +R DDID RLPLLNN YY + Sbjct: 671 TGQPLCIYEPYFGEGTWPFLHATS-LYRGIGLSTKGRRREADDIDAPSRLPLLNNPYYRD 729
Query: 412 VLCEFGALFAIANRIDRVHKN 474 L E+GA FAIANR+DR+H+N Sbjct: 730 ALGEYGAFFAIANRVDRIHRN 750
>tr|A2ZVI3|A2ZVI3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_002555 PE=4 SV=1 Length = 1029
Score = 146 bits (368), Expect = 6e-34 Identities = 69/112 (61%), Positives = 90/112 (80%) Frame = +1
Query: 139 GSWEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRG 318 G+WE+VY+ VK++ER+KN +LHERDD ELERTGQP+ IYEP++G G F+H++ YRG Sbjct: 660 GTWEEVYRNVKRVERMKN-DLHERDDKELERTGQPLSIYEPFFGEGTWPFLHRSS-LYRG 717
Query: 319 VSLLSRQKRPVHDDIDVAVRLPLLNNTYYEEVLCEFGALFAIANRIDRVHKN 474 + L S+ +RP DDID + RLPLLNN YY ++L EFGA FA+ANRIDR+HKN Sbjct: 718 IGLSSKGRRPGADDIDASSRLPLLNNGYYRDILGEFGAFFALANRIDRIHKN 769
>tr|A9TUR7|A9TUR7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_493 PE=4 SV=1 Length = 869
Score = 134 bits (336), Expect = 3e-30 Identities = 64/112 (57%), Positives = 82/112 (73%), Gaps = 1/112 (0%) Frame = +1
Query: 142 SWEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRGV 321 +WED+ K+VKK E K+ +L ER D E++R+GQP+CIYEPY+G GA F+H + YR + Sbjct: 522 TWEDISKMVKKTEVHKD-DLKERSDAEIQRSGQPLCIYEPYHGTGAWPFLHDENTLYRAI 580
Query: 322 SLLSRQKRPVHDDIDVAVRLP-LLNNTYYEEVLCEFGALFAIANRIDRVHKN 474 SL + +RP DD+D RLP LLN++YY VLCEFG FAIANRID VHKN Sbjct: 581 SLSTHARRPTDDDVDAQERLPGLLNDSYYRNVLCEFGTFFAIANRIDVVHKN 632
>tr|Q9LZ77|Q9LZ77_ARATH Putative uncharacterized protein T32M21_80 OS=Arabidopsis thaliana GN=T32M21_80 PE=4 SV=1 Length = 1091
Score = 128 bits (322), Expect = 1e-28 Identities = 58/108 (53%), Positives = 82/108 (75%) Frame = +1
Query: 145 WEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRGVS 324 WE++Y+ +K E+LK E++ERD+GELERTG+P+CIYE Y G GA F+H YRG+S Sbjct: 705 WEEIYRNARKSEKLK-FEVNERDEGELERTGEPLCIYEIYNGAGAWPFLHHGS-LYRGLS 762
Query: 325 LLSRQKRPVHDDIDVAVRLPLLNNTYYEEVLCEFGALFAIANRIDRVH 468 L S+ +R DD+D A RLPLLN+TYY ++LCE G +F++AN++D +H Sbjct: 763 LSSKDRRLSSDDVDAADRLPLLNDTYYRDILCEIGGMFSVANKVDSIH 810
>tr|Q940Y7|Q940Y7_ARATH AT5g04480/T32M21_80 OS=Arabidopsis thaliana GN=At5g04480 PE=2 SV=1 Length = 1050
Score = 128 bits (322), Expect = 1e-28 Identities = 58/108 (53%), Positives = 82/108 (75%) Frame = +1
Query: 145 WEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRGVS 324 WE++Y+ +K E+LK E++ERD+GELERTG+P+CIYE Y G GA F+H YRG+S Sbjct: 664 WEEIYRNARKSEKLK-FEVNERDEGELERTGEPLCIYEIYNGAGAWPFLHHGS-LYRGLS 721
Query: 325 LLSRQKRPVHDDIDVAVRLPLLNNTYYEEVLCEFGALFAIANRIDRVH 468 L S+ +R DD+D A RLPLLN+TYY ++LCE G +F++AN++D +H Sbjct: 722 LSSKDRRLSSDDVDAADRLPLLNDTYYRDILCEIGGMFSVANKVDSIH 769
>tr|Q9AV30|Q9AV30_ORYSJ Os10g0546200 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0001O14.15 PE=4 SV=1 Length = 1012
Score = 127 bits (320), Expect = 2e-28 Identities = 63/110 (57%), Positives = 79/110 (71%) Frame = +1
Query: 142 SWEDVYKVVKKMERLKNTELHERDDGELERTGQPICIYEPYYGIGASVFVHQNDPTYRGV 321 SW++VYK +K ERLK E +ERD+GELERTGQP+CIYE Y G GA F+H YRG+ Sbjct: 632 SWDEVYKNARKSERLK-PEGNERDEGELERTGQPVCIYEIYSGEGAWPFLHHGS-LYRGI 689
Query: 322 SLLSRQKRPVHDDIDVAVRLPLLNNTYYEEVLCEFGALFAIANRIDRVHK 471 +L +RP DD+D L +L+N YY + LCEFGA+FA+ANRID VHK Sbjct: 690 TLSKGGRRPRSDDVDAVTHLSVLDNPYYSDRLCEFGAMFAVANRIDAVHK 739
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