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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911619
Clone id YMU001_000007_B08
Library
Length 221
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000007_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATATCATTGTGTAAAACAGCTCTGGTTTCAAATGTGTGCGGGCGAGCGTAGTGATTAGCC
CATGCTTCAAAAAGCATTGAGGGGCGACATTCTGGGTTCAAACCCCCGACTCCCAACAAC
GCCACCATTTATTGGGTGGACTTGCCCACCTCGAGATCCCCGCCATCGTCCTTGCACCGT
CGATCCCTTTACCCACCGCCCACGTCCCATCCTGTGTCACT
■■Homology search results ■■ -
sp_hit_id Q0P5C0
Definition sp|Q0P5C0|LMF1_BOVIN Lipase maturation factor 1 OS=Bos taurus
Align length 19
Score (bit) 33.5
E-value 0.33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911619|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_B08.
         (221 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0P5C0|LMF1_BOVIN Lipase maturation factor 1 OS=Bos taurus GN...    33   0.33 
sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=...    32   1.3  
sp|O80497|GUN15_ARATH Endoglucanase 15 OS=Arabidopsis thaliana G...    30   2.8  
sp|Q27J81|INF2_HUMAN Inverted formin-2 OS=Homo sapiens GN=INF2 P...    30   3.7  
sp|Q5MJS3|DMP4_MOUSE Dentin matrix protein 4 OS=Mus musculus GN=...    29   6.3  
sp|Q9JLG8|CAN15_MOUSE Calpain-15 OS=Mus musculus GN=Solh PE=1 SV=1     29   6.3  
sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subun...    29   8.2  
sp|Q96S06|LMF1_HUMAN Lipase maturation factor 1 OS=Homo sapiens ...    29   8.2  

>sp|Q0P5C0|LMF1_BOVIN Lipase maturation factor 1 OS=Bos taurus
           GN=LMF1 PE=2 SV=1
          Length = 561

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 143 CPPRDPRHRPCTVDPFTHR 199
           C P DPR RPC + P+ HR
Sbjct: 437 CKPGDPRRRPCLISPYHHR 455


>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo
            sapiens GN=MLL2 PE=1 SV=1
          Length = 5262

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 89   ILGSNPRLPTTPPFIGWTCPPRDPRHRPCTVDPFTHRPR 205
            +LG++ R     P    T PP  PRH+P T DPF  +PR
Sbjct: 1936 MLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFL-KPR 1973


>sp|O80497|GUN15_ARATH Endoglucanase 15 OS=Arabidopsis thaliana
           GN=At2g44570 PE=2 SV=1
          Length = 492

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 44  ERSD*PMLQKALRGDILGSNPRLPTTPPFIGWTCPPRDPRHRPCTVDPFTHRPRPILCH 220
           + SD   L +A    ILGSNP+  +     G   P R P HR  ++    + P+P+ C+
Sbjct: 376 QASDLLNLARAQVDYILGSNPKKMSYMVGYGTNYPKR-PHHRGASIVSIKNDPKPVTCN 433


>sp|Q27J81|INF2_HUMAN Inverted formin-2 OS=Homo sapiens GN=INF2 PE=1
           SV=2
          Length = 1249

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +2

Query: 92  LGSNPRLPTTPPFIGWTCPPRDPRHRPCTVDP 187
           LG  P  P   P +GW  PP  P   PCT  P
Sbjct: 497 LGCPPPPPPLLPGMGWGPPPPPPPLLPCTCSP 528


>sp|Q5MJS3|DMP4_MOUSE Dentin matrix protein 4 OS=Mus musculus
           GN=Fam20c PE=2 SV=1
          Length = 579

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/38 (44%), Positives = 17/38 (44%)
 Frame = +2

Query: 95  GSNPRLPTTPPFIGWTCPPRDPRHRPCTVDPFTHRPRP 208
           G  PR P          PPRDP HRP   DP    PRP
Sbjct: 118 GQEPRSP----------PPRDPAHRPLLRDP---GPRP 142


>sp|Q9JLG8|CAN15_MOUSE Calpain-15 OS=Mus musculus GN=Solh PE=1 SV=1
          Length = 1095

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +2

Query: 77  LRGDILGSNPRLPTTPPFIGWTCPPRDPRHRPCTVDPFTHRPRPILC 217
           L GDI+   P  P++P F  W+C         CT+   T  PR  +C
Sbjct: 334 LAGDIVRYTPASPSSPDFTTWSC-------ARCTLRNPTTAPRCSVC 373


>sp|Q54UU1|TPPC4_DICDI Trafficking protein particle complex subunit
           4 OS=Dictyostelium discoideum GN=trappc4 PE=3 SV=1
          Length = 135

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +3

Query: 15  NSSGFKCVRASVVISPCFKKH*GATFWV-QTPDSQQRHHLLGGLAHLEIPAIVLAP 179
           +SSG + +        CF+ H G  F+V   P+ QQ   LL G+  L    ++  P
Sbjct: 55  SSSGIEVIETEAFKLQCFQTHTGIKFYVIADPNHQQLEELLHGVYELYTDYVLKNP 110


>sp|Q96S06|LMF1_HUMAN Lipase maturation factor 1 OS=Homo sapiens
           GN=LMF1 PE=2 SV=1
          Length = 567

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 143 CPPRDPRHRPCTVDPFTHR 199
           C P DP  RPC + P+ +R
Sbjct: 443 CKPGDPSRRPCLISPYHYR 461
tr_hit_id A7BEU4
Definition tr|A7BEU4|A7BEU4_9ACTO Putative uncharacterized protein OS=Actinomyces odontolyticus ATCC 17982
Align length 48
Score (bit) 39.3
E-value 0.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911619|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_B08.
         (221 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7BEU4|A7BEU4_9ACTO Putative uncharacterized protein OS=Actin...    39   0.10 
tr|Q6ZJL0|Q6ZJL0_ORYSJ Putative uncharacterized protein OJ1368_G...    35   1.4  
tr|Q63697|Q63697_9MURI Octamer-binding transcription factor (Fra...    34   4.2  
tr|Q63696|Q63696_9MURI Octamer-binding transcription factor (Fra...    34   4.2  
tr|A5C6F6|A5C6F6_VITVI Putative uncharacterized protein OS=Vitis...    34   4.2  
tr|Q7PZX4|Q7PZX4_ANOGA AGAP012133-PA (Fragment) OS=Anopheles gam...    34   4.2  
tr|Q1QXZ8|Q1QXZ8_CHRSD Putative uncharacterized protein OS=Chrom...    33   5.5  
tr|A3NXZ5|A3NXZ5_BURP0 Amidase family protein OS=Burkholderia ps...    33   7.2  
tr|A3MHL2|A3MHL2_BURM7 Amidase family protein OS=Burkholderia ma...    33   7.2  
tr|A1V6Q0|A1V6Q0_BURMS Amidase family protein OS=Burkholderia ma...    33   7.2  
tr|B7CK88|B7CK88_BURPS Amidase family protein OS=Burkholderia ps...    33   7.2  
tr|B2GZI9|B2GZI9_BURPS Amidase family protein OS=Burkholderia ps...    33   7.2  
tr|B1HCY4|B1HCY4_BURPS Amidase family protein OS=Burkholderia ps...    33   7.2  
tr|A9K5E1|A9K5E1_BURMA Amidase family protein OS=Burkholderia ma...    33   7.2  
tr|A8E7X2|A8E7X2_BURPS Amidase family protein OS=Burkholderia ps...    33   7.2  
tr|A5XXI9|A5XXI9_BURMA Amidase family protein OS=Burkholderia ma...    33   7.2  
tr|A5TQJ1|A5TQJ1_BURMA Amidase family protein OS=Burkholderia ma...    33   7.2  
tr|A5JCK7|A5JCK7_BURMA Amidase family protein OS=Burkholderia ma...    33   7.2  
tr|A4LEF4|A4LEF4_BURPS Amidase family protein OS=Burkholderia ps...    33   7.2  

>tr|A7BEU4|A7BEU4_9ACTO Putative uncharacterized protein
           OS=Actinomyces odontolyticus ATCC 17982 GN=ACTODO_02197
           PE=4 SV=1
          Length = 574

 Score = 39.3 bits (90), Expect = 0.10
 Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 74  ALRGDILGSNPRLPT-TPPFIGWTCPPRDPRHRPCTVDPF-THRPRPI 211
           A +G   G  P  P  T P  GWT PP  PR R  T  P  THRPR +
Sbjct: 261 AAQGTNAGPRPAAPRPTQPHAGWTTPPSAPRPRQWTPRPMPTHRPRTV 308


>tr|Q6ZJL0|Q6ZJL0_ORYSJ Putative uncharacterized protein
           OJ1368_G08.8 OS=Oryza sativa subsp. japonica
           GN=OJ1368_G08.8 PE=4 SV=1
          Length = 291

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
 Frame = +2

Query: 80  RGDILGSNPRLPTTPPFIGWTCPPRDPRHRP-----CTVDPFTHRPRP 208
           RG +L S+   P  PPF+  T PP   R  P     CT  P  H  RP
Sbjct: 149 RGKLLSSSRSAPRAPPFMAATSPPPAGRSVPLLRPRCTAGPLLHGRRP 196


>tr|Q63697|Q63697_9MURI Octamer-binding transcription factor
           (Fragment) OS=Rattus sp. PE=2 SV=1
          Length = 456

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
 Frame = +2

Query: 65  LQKALRGDILGSNPR--LPTTPP----FIGWTCPPRDPRHRPCTVDPFTHRPRPILC 217
           L +  +G +L S PR  LPT  P     I  TCPP     RP   DP    P+P  C
Sbjct: 108 LPQQTQGALLTSQPRAGLPTLHPGPRSCIPSTCPPYQAMTRPTLPDPHLSHPQPSKC 164


>tr|Q63696|Q63696_9MURI Octamer-binding transcription factor
           (Fragment) OS=Rattus sp. PE=2 SV=1
          Length = 495

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
 Frame = +2

Query: 65  LQKALRGDILGSNPR--LPTTPP----FIGWTCPPRDPRHRPCTVDPFTHRPRPILC 217
           L +  +G +L S PR  LPT  P     I  TCPP     RP   DP    P+P  C
Sbjct: 147 LPQQTQGALLTSQPRAGLPTLHPGPRSCIPSTCPPYQAMTRPTLPDPHLSHPQPSKC 203


>tr|A5C6F6|A5C6F6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026013 PE=4 SV=1
          Length = 379

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = +2

Query: 59  PMLQKALRGDILGSNPRLPTTPPFIGWTCPPRDPRHR------PCTVDPFTHRPRPILCH 220
           P  + +L  D     P+ P  PPF G   P   P+HR      P T+   T RP+  +CH
Sbjct: 17  PRTRASLAQDSTYEAPQAPVIPPFEGGV-PSNPPQHRHETRRPPTTLGASTSRPKRSVCH 75


>tr|Q7PZX4|Q7PZX4_ANOGA AGAP012133-PA (Fragment) OS=Anopheles gambiae
            GN=AGAP012133 PE=4 SV=4
          Length = 1602

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 101  NPRLPTTPPFI-GWTCPPRDPRHRPCTVDPFTHRPRPIL 214
            +P +P  PP I G TCPP  P   P T  P    P P L
Sbjct: 1003 DPTIPCNPPCIPGLTCPPTGPTPAPTTAQPPITLPPPTL 1041


>tr|Q1QXZ8|Q1QXZ8_CHRSD Putative uncharacterized protein
           OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
           BAA-138 / NCIMB 13768) GN=Csal_1305 PE=4 SV=1
          Length = 337

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
 Frame = +2

Query: 53  D*PMLQKALRGDILGSNPRLPTTPPFIGWTCPPRDPRHRPCTV------DPFTHRPRPIL 214
           D P L  AL  D LG     P       W  PPRD R+RP  V      + F   P P  
Sbjct: 239 DWPALHGALPDDSLGVTLHKPH------WLAPPRDERYRPLPVLEAELREHFVVAPTPRQ 292

Query: 215 CH 220
           CH
Sbjct: 293 CH 294


>tr|A3NXZ5|A3NXZ5_BURP0 Amidase family protein OS=Burkholderia
           pseudomallei (strain 1106a) GN=BURPS1106A_2972 PE=4 SV=1
          Length = 616

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 18/48 (37%), Positives = 20/48 (41%)
 Frame = +2

Query: 65  LQKALRGDILGSNPRLPTTPPFIGWTCPPRDPRHRPCTVDPFTHRPRP 208
           +  A RG       R P  P      CPPR P  RPC V   +H  RP
Sbjct: 70  ISHANRGQTRSRRDRPPPAP----LRCPPRRPLARPCAVGAASHAKRP 113


>tr|A3MHL2|A3MHL2_BURM7 Amidase family protein OS=Burkholderia
           mallei (strain NCTC 10247) GN=BMA10247_0172 PE=4 SV=1
          Length = 616

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 18/48 (37%), Positives = 20/48 (41%)
 Frame = +2

Query: 65  LQKALRGDILGSNPRLPTTPPFIGWTCPPRDPRHRPCTVDPFTHRPRP 208
           +  A RG       R P  P      CPPR P  RPC V   +H  RP
Sbjct: 70  ISHANRGQTRSRRDRPPPAP----LRCPPRRPLARPCAVGAASHAKRP 113


>tr|A1V6Q0|A1V6Q0_BURMS Amidase family protein OS=Burkholderia
           mallei (strain SAVP1) GN=BMASAVP1_A2603 PE=4 SV=1
          Length = 616

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 18/48 (37%), Positives = 20/48 (41%)
 Frame = +2

Query: 65  LQKALRGDILGSNPRLPTTPPFIGWTCPPRDPRHRPCTVDPFTHRPRP 208
           +  A RG       R P  P      CPPR P  RPC V   +H  RP
Sbjct: 70  ISHANRGQTRSRRDRPPPAP----LRCPPRRPLARPCAVGAASHAKRP 113