| BP911635 |
| Clone id |
YMU001_000007_D03 |
| Library |
YMU01 |
| Length |
534 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000007_D03. |
| Accession |
BP911635 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL3182Contig1 |
| Sequence |
ATTGTGAAGACACCCAATGGAAACTTGCATGGACAGAGGGATCTACATCTGTCATGCTGT CAAGAGTAGATTTTCCCTCCTCAAGTAGTCTTTTGCACTCCTTTTGTTCTCCTTGCTCCA GTTTAAGAGCAGCTATTCTCATATTCAAATACAACACAGGCTCTTCAATTCTTCTCTGCT GAGATGCACGCAGCTTCTCTATCACTTCAGAAAGATAACTAATTGCAACCTCTACATCAG TATATTGGCGTGATACAATGACAGCAAAATGTGCAAGCTTCAAGTGGTTGATTTTGCTTT CAAACTCGGATATAAAATTGCGGTAAAGCTGAATGAGTGCATCACCCCCTTGGAAGACAG GAAGGCCGACAAATTGTTCAAGCTTGAGAGTCAGCTGATGCCAGAGCTTGCGCTGATAGA GATCGGCGAGAGAAGTGTACCATTCTGCGAGCTCTGGCTGAGCCTCCCGCTGTGTCTCCA AATACTGAAGCGCGGCCATGACGAAGCACACACGCAGATCTCTGTCTCCCTCTC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P84169 |
| Definition |
sp|P84169|PSD13_CHICK 26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus |
| Align length |
161 |
| Score (bit) |
111.0 |
| E-value |
2.0e-24 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9SX33 |
| Definition |
tr|A9SX33|A9SX33_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
166 |
| Score (bit) |
259.0 |
| E-value |
6.0e-68 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911635|Adiantum capillus-veneris mRNA, clone: YMU001_000007_D03. (534 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SX33|A9SX33_PHYPA Predicted protein OS=Physcomitrella paten... 259 6e-68 tr|A9SCR8|A9SCR8_PHYPA Predicted protein OS=Physcomitrella paten... 256 4e-67 tr|Q8GYA6|Q8GYA6_ARATH Putative uncharacterized protein At4g1900... 248 1e-64 tr|Q9FK79|Q9FK79_ARATH 26S proteasome subunit-like protein OS=Ar... 246 5e-64 tr|Q8RWF0|Q8RWF0_ARATH 26S proteasome subunit-like protein (26S ... 246 5e-64 tr|Q3E8G4|Q3E8G4_ARATH Uncharacterized protein At5g45620.2 OS=Ar... 246 5e-64 tr|Q94E72|Q94E72_ORYSJ Putative 26S proteasome subunit RPN9b (Pu... 239 5e-62 tr|A2WQL6|A2WQL6_ORYSI Putative uncharacterized protein OS=Oryza... 239 5e-62 tr|B8AQT0|B8AQT0_ORYSI Putative uncharacterized protein OS=Oryza... 236 4e-61 tr|B4FTW8|B4FTW8_MAIZE Putative uncharacterized protein OS=Zea m... 234 2e-60 tr|B4FQ29|B4FQ29_MAIZE 26S proteasome non-ATPase regulatory subu... 234 2e-60 tr|Q10Q05|Q10Q05_ORYSJ Os03g0214600 protein OS=Oryza sativa subs... 234 2e-60 tr|A3AFG6|A3AFG6_ORYSJ Putative uncharacterized protein OS=Oryza... 234 2e-60 tr|B6UAD0|B6UAD0_MAIZE 26S proteasome non-ATPase regulatory subu... 233 5e-60 tr|B6THY8|B6THY8_MAIZE 26S proteasome non-ATPase regulatory subu... 232 8e-60 tr|B6TA88|B6TA88_MAIZE 26S proteasome non-ATPase regulatory subu... 232 8e-60 tr|Q076B1|Q076B1_NICBE RPN9 (Fragment) OS=Nicotiana benthamiana ... 209 5e-53 tr|A7PBY8|A7PBY8_VITVI Chromosome chr2 scaffold_11, whole genome... 187 2e-46 tr|A8IW48|A8IW48_CHLRE 26S proteasome regulatory subunit OS=Chla... 124 2e-27 tr|B5DGU8|B5DGU8_SALSA Proteasome (Prosome, macropain) 26S subun... 118 2e-25 tr|Q7ZU69|Q7ZU69_DANRE Proteasome (Prosome, macropain) 26S subun... 114 2e-24 tr|Q6TGV4|Q6TGV4_DANRE Proteasome 26S subunit, non-ATPase, 13 OS... 114 2e-24 tr|B5DGU7|B5DGU7_SALSA Proteasome (Prosome, macropain) 26S subun... 114 2e-24 tr|A8WGP1|A8WGP1_DANRE Proteasome (Prosome, macropain) 26S subun... 114 3e-24 tr|B2RT97|B2RT97_MOUSE Proteasome (Prosome, macropain) 26S subun... 109 1e-22 tr|B0BN93|B0BN93_RAT Proteasome (Prosome, macropain) 26S subunit... 109 1e-22 tr|Q9Y6E3|Q9Y6E3_HUMAN HSPC027 OS=Homo sapiens PE=2 SV=1 108 2e-22 tr|Q66IX2|Q66IX2_XENLA MGC84231 protein OS=Xenopus laevis GN=psm... 107 3e-22 tr|Q53XU2|Q53XU2_HUMAN Proteasome (Prosome, macropain) 26S subun... 107 3e-22 tr|Q6GLI4|Q6GLI4_XENTR Proteasome (Prosome, macropain) 26S subun... 107 4e-22
>tr|A9SX33|A9SX33_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189316 PE=4 SV=1 Length = 386
Score = 259 bits (662), Expect = 6e-68 Identities = 125/166 (75%), Positives = 146/166 (87%) Frame = -3
Query: 499 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 320 MAALQYLE QR AQPELAEWYTS+ADLYQRKLWHQLT KL+QFV L VFQ GD L+QLY Sbjct: 1 MAALQYLEKQRAAQPELAEWYTSMADLYQRKLWHQLTQKLDQFVALTVFQAGDTLVQLYH 60
Query: 319 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 140 NFI +FE+KIN LKLAHFAVIVS+QY + + AI+YL EVIEKLR S +RR+EEP+LY+ M Sbjct: 61 NFIRDFETKINLLKLAHFAVIVSKQYPEKDAAIAYLEEVIEKLRTSGERRVEEPILYVKM 120
Query: 139 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVSSQ 2 ++AA+KL++GE + CK+LLEEGK+TLDSMTDVDPSVHAS HWVSSQ Sbjct: 121 QVAAMKLQRGEIQVCKKLLEEGKTTLDSMTDVDPSVHASVHWVSSQ 166
>tr|A9SCR8|A9SCR8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_210905 PE=4 SV=1 Length = 386
Score = 256 bits (655), Expect = 4e-67 Identities = 123/166 (74%), Positives = 145/166 (87%) Frame = -3
Query: 499 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 320 MAALQYLE QR AQPELAEWY S+ADLYQRKLWHQLT KL+QFV L VFQ GD L+QLY Sbjct: 1 MAALQYLEKQRAAQPELAEWYASMADLYQRKLWHQLTQKLDQFVALTVFQAGDTLVQLYH 60
Query: 319 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 140 NFI +FE+KIN LKLAHFAVIVS+QY + A++YL EVIEKLR S +RR++EP+LY+ M Sbjct: 61 NFIRDFETKINLLKLAHFAVIVSKQYPEKGAAVAYLEEVIEKLRTSGERRVDEPILYVKM 120
Query: 139 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVSSQ 2 ++AALKL++GE +ECK+LLEEG++TLDSMTDVDPSVHAS HWVSSQ Sbjct: 121 QVAALKLQRGEIQECKKLLEEGRTTLDSMTDVDPSVHASVHWVSSQ 166
>tr|Q8GYA6|Q8GYA6_ARATH Putative uncharacterized protein At4g19006 (26S proteasome subunit RPN9b) OS=Arabidopsis thaliana GN=RPN9b PE=2 SV=1 Length = 386
Score = 248 bits (633), Expect = 1e-64 Identities = 117/166 (70%), Positives = 143/166 (86%) Frame = -3
Query: 499 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 320 MAALQYLE+Q+ A PEL EWY SLADLYQ+KLWHQLTLKLEQF+ L VFQ GDALIQLY Sbjct: 1 MAALQYLESQKNAHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALSVFQAGDALIQLYN 60
Query: 319 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 140 NFI++FE++IN LKLAHFAV+VSRQY + E A+SYL VIEKL+A+++ RI EP+ Y+ Sbjct: 61 NFITDFETRINLLKLAHFAVVVSRQYPEKEAAVSYLEGVIEKLKATKESRINEPISYIET 120
Query: 139 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVSSQ 2 +IA KLEQG+QKECK++L++GKS LDSMTD+DPSV+A+F WVSSQ Sbjct: 121 QIALFKLEQGDQKECKKILDDGKSLLDSMTDIDPSVYANFFWVSSQ 166
>tr|Q9FK79|Q9FK79_ARATH 26S proteasome subunit-like protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 375
Score = 246 bits (628), Expect = 5e-64 Identities = 115/166 (69%), Positives = 143/166 (86%) Frame = -3
Query: 499 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 320 MAALQYLE+ + PEL EWY SLADLYQ+KLWHQLTLKLEQF+ L VFQ GDALIQ Y Sbjct: 1 MAALQYLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYH 60
Query: 319 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 140 NFI++FE+KIN LKLAHFAV+VSRQY++ E A+SYL VIEKLRA+++ RI EP++Y+ Sbjct: 61 NFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIET 120
Query: 139 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVSSQ 2 + A KLEQG+QKECK++L++GKS+LDSMTD+DPSV+A+F+WVSSQ Sbjct: 121 QKALFKLEQGDQKECKKILDDGKSSLDSMTDIDPSVYANFYWVSSQ 166
>tr|Q8RWF0|Q8RWF0_ARATH 26S proteasome subunit-like protein (26S proteasome subunit RPN9a) OS=Arabidopsis thaliana GN=RPN9a PE=2 SV=1 Length = 386
Score = 246 bits (628), Expect = 5e-64 Identities = 115/166 (69%), Positives = 143/166 (86%) Frame = -3
Query: 499 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 320 MAALQYLE+ + PEL EWY SLADLYQ+KLWHQLTLKLEQF+ L VFQ GDALIQ Y Sbjct: 1 MAALQYLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYH 60
Query: 319 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 140 NFI++FE+KIN LKLAHFAV+VSRQY++ E A+SYL VIEKLRA+++ RI EP++Y+ Sbjct: 61 NFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIET 120
Query: 139 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVSSQ 2 + A KLEQG+QKECK++L++GKS+LDSMTD+DPSV+A+F+WVSSQ Sbjct: 121 QKALFKLEQGDQKECKKILDDGKSSLDSMTDIDPSVYANFYWVSSQ 166
>tr|Q3E8G4|Q3E8G4_ARATH Uncharacterized protein At5g45620.2 OS=Arabidopsis thaliana GN=At5g45620 PE=4 SV=1 Length = 350
Score = 246 bits (628), Expect = 5e-64 Identities = 115/166 (69%), Positives = 143/166 (86%) Frame = -3
Query: 499 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 320 MAALQYLE+ + PEL EWY SLADLYQ+KLWHQLTLKLEQF+ L VFQ GDALIQ Y Sbjct: 1 MAALQYLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYH 60
Query: 319 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 140 NFI++FE+KIN LKLAHFAV+VSRQY++ E A+SYL VIEKLRA+++ RI EP++Y+ Sbjct: 61 NFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIET 120
Query: 139 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVSSQ 2 + A KLEQG+QKECK++L++GKS+LDSMTD+DPSV+A+F+WVSSQ Sbjct: 121 QKALFKLEQGDQKECKKILDDGKSSLDSMTDIDPSVYANFYWVSSQ 166
>tr|Q94E72|Q94E72_ORYSJ Putative 26S proteasome subunit RPN9b (Putative uncharacterized protein) (Os01g0511300 protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0054L14.8 PE=4 SV=1 Length = 385
Score = 239 bits (611), Expect = 5e-62 Identities = 115/164 (70%), Positives = 141/164 (85%) Frame = -3
Query: 493 ALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYRNF 314 ALQY+E QR+A+P+LA+ Y LADLYQRKLWHQLTLKL+ F+ LP Q GD +IQLY NF Sbjct: 2 ALQYVEAQRQARPDLADAYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTIIQLYNNF 61
Query: 313 ISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNMRI 134 IS+FE+KIN LKLAHFAVI SRQY D + AIS+L V KLR +++RRI+EPVLY+ M+I Sbjct: 62 ISDFETKINLLKLAHFAVIASRQYPDKDAAISFLEGVTAKLRETRERRIDEPVLYVKMQI 121
Query: 133 AALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVSSQ 2 AA+ LE+G+QKECK+LL+EGKSTLDSMTDVDP+VHASF+W+SSQ Sbjct: 122 AAINLEKGDQKECKKLLDEGKSTLDSMTDVDPTVHASFYWISSQ 165
>tr|A2WQL6|A2WQL6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02152 PE=4 SV=1 Length = 385
Score = 239 bits (611), Expect = 5e-62 Identities = 115/164 (70%), Positives = 141/164 (85%) Frame = -3
Query: 493 ALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYRNF 314 ALQY+E QR+A+P+LA+ Y LADLYQRKLWHQLTLKL+ F+ LP Q GD +IQLY NF Sbjct: 2 ALQYVEAQRQARPDLADAYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTIIQLYNNF 61
Query: 313 ISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNMRI 134 IS+FE+KIN LKLAHFAVI SRQY D + AIS+L V KLR +++RRI+EPVLY+ M+I Sbjct: 62 ISDFETKINLLKLAHFAVIASRQYPDKDAAISFLEGVTAKLRETRERRIDEPVLYVKMQI 121
Query: 133 AALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVSSQ 2 AA+ LE+G+QKECK+LL+EGKSTLDSMTDVDP+VHASF+W+SSQ Sbjct: 122 AAINLEKGDQKECKKLLDEGKSTLDSMTDVDPTVHASFYWISSQ 165
>tr|B8AQT0|B8AQT0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10521 PE=4 SV=1 Length = 385
Score = 236 bits (603), Expect = 4e-61 Identities = 115/164 (70%), Positives = 139/164 (84%) Frame = -3
Query: 493 ALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYRNF 314 ALQ++E+QREA+PELA+ Y LADLYQRKLWHQLTLKL+ F+ LP Q GD LIQLY NF Sbjct: 2 ALQFVESQREARPELADPYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTLIQLYNNF 61
Query: 313 ISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNMRI 134 I++FE+KIN LKLAHFAVI SRQY D + AIS+L VI KLR ++ RI EP+LY+ M+I Sbjct: 62 ITDFETKINLLKLAHFAVIASRQYPDKDAAISFLEGVITKLRETKDLRINEPILYVKMQI 121
Query: 133 AALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVSSQ 2 AA+ LE+G QKECK+LL+EGKSTLDSMTDVDP+VHASF+W+SSQ Sbjct: 122 AAINLEKGNQKECKKLLDEGKSTLDSMTDVDPTVHASFYWISSQ 165
>tr|B4FTW8|B4FTW8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 385
Score = 234 bits (598), Expect = 2e-60 Identities = 111/164 (67%), Positives = 139/164 (84%) Frame = -3
Query: 493 ALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYRNF 314 ALQY+E QR+A+P+LA+WY SLADLYQ+KLWHQLTLKL+QF+ L Q GD +IQLY NF Sbjct: 2 ALQYVEAQRQARPDLADWYASLADLYQQKLWHQLTLKLDQFLQLQAAQTGDTIIQLYNNF 61
Query: 313 ISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNMRI 134 I++FE+KIN LKLAHFAVI SRQY D + AI++L VI KLR +++ RI EP+LY+ M+I Sbjct: 62 ITDFETKINLLKLAHFAVIASRQYPDKDAAITFLEGVITKLRDTRESRINEPILYVKMQI 121
Query: 133 AALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVSSQ 2 AA+ LE+G QKECK LE+GK+TLDSMTDVDP+VHASF+W+SSQ Sbjct: 122 AAINLEKGNQKECKNSLEDGKTTLDSMTDVDPTVHASFYWISSQ 165
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