BP911647
Clone id YMU001_000007_E05
Library
Length 511
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000007_E05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCGGACGGAGGCCGGAAAGTGGTCGGAAAACAACCGGTTGGTTGACCGGTGGCCGGTAGT
CAATGGCCGGTGGCCGAATTCAAAAGCGGACTTGTCTTCTCAAGGGCGGCCACACATGGG
CGGATTGGAGGGTCTGATTTGGACTTATTCGCACAAGGGCGGCTACACATGGCTGTCTCT
CATAAGAGAGGGCAACCCTTTTGGCCTATAAAAGGAGGCCATTTCTACACACATTTCATA
GTGTGAAGTTGATGCAACAAGGTGAGTGTGAGGTGGTGAGAGTGAAGCAAGGCGGGAGCT
CCATTAAGGGTATAATCCCTTTGTAAACTACCTCTTGTTTAGAAGTACTAAAGCCATTGA
GTGGCTGCTTTCCCGTGGACGTAGCCCACATTGGGTGAACCACGTATATCGTGTGTACTC
TCTCTCTCTCTCTCTACTCTATAATCTCGTGTATATAAATCTGTCTCTCTCCATTAATTA
ATCCACTCAATTCAAGGAATCCTTTCCTTGA
■■Homology search results ■■ -
sp_hit_id Q82XS4
Definition sp|Q82XS4|GPMA1_NITEU 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 OS=Nitrosomonas europaea
Align length 45
Score (bit) 31.6
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911647|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_E05.
(511 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q82XS4|GPMA1_NITEU 2,3-bisphosphoglycerate-dependent phosphog... 32 2.2
sp|Q8TES7|FBF1_HUMAN Fas-binding factor 1 OS=Homo sapiens GN=FBF... 30 6.6
sp|Q9HCC8|GDPD2_HUMAN Glycerophosphodiester phosphodiesterase do... 30 8.6

>sp|Q82XS4|GPMA1_NITEU 2,3-bisphosphoglycerate-dependent
phosphoglycerate mutase 1 OS=Nitrosomonas europaea
GN=gpmA1 PE=3 SV=1
Length = 234

Score = 31.6 bits (70), Expect = 2.2
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -1

Query: 160 ALVRISPNQTLQSAHVWPPLRRQVRF*IRPPAI---DYRPPVNQP 35
AL + P ++ +W ++ Q+RF PP + D R PVNQP
Sbjct: 98 ALEGMRPWAAIRKFGIWSTMKSQIRFDAAPPLLMPDDPRAPVNQP 142


>sp|Q8TES7|FBF1_HUMAN Fas-binding factor 1 OS=Homo sapiens GN=FBF1
PE=2 SV=2
Length = 1133

Score = 30.0 bits (66), Expect = 6.6
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -3

Query: 176 TAMCSRPCANKSKSDPPIRP--CVAALEKTSPLLNSATGH*LPATGQPTGCFPTTFRP 9
T RPC S P+ +AL SP +A G L AT +P CFP+T +P
Sbjct: 481 TTARERPCVRPGVSGSPVTQNHAASALPTGSPKRGTAPGD-LSAT-EPATCFPSTQKP 536


>sp|Q9HCC8|GDPD2_HUMAN Glycerophosphodiester phosphodiesterase
domain-containing protein 2 OS=Homo sapiens GN=GDPD2
PE=2 SV=1
Length = 539

Score = 29.6 bits (65), Expect = 8.6
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3

Query: 108 GHTWADWRV*FGLIRTRAATHGCLS*ERATLLAYKRRPF-LHTFHSVKLM 254
GH W DW + F L+ + T+ L A LL R+P LH+ H V L+
Sbjct: 77 GH-WMDWSLAFLLVISLLVTYASLLLVLALLLRLCRQPLHLHSLHKVLLL 125


tr_hit_id A7MX71
Definition tr|A7MX71|A7MX71_VIBHB Putative uncharacterized protein OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
Align length 51
Score (bit) 36.6
E-value 0.74
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911647|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_E05.
(511 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7MX71|A7MX71_VIBHB Putative uncharacterized protein OS=Vibri... 37 0.74
tr|B5Y4W2|B5Y4W2_PHATR Predicted protein OS=Phaeodactylum tricor... 36 1.3
tr|A0Z0P5|A0Z0P5_9GAMM Exoribonuclease R OS=marine gamma proteob... 35 2.8
tr|Q63J05|Q63J05_BURPS Putative membrane protein OS=Burkholderia... 34 4.8
tr|Q62E71|Q62E71_BURMA BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|Q3JJT6|Q3JJT6_BURP1 BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A3P8G3|A3P8G3_BURP0 BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A3NN07|A3NN07_BURP6 BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A3MAX3|A3MAX3_BURM7 BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A2S076|A2S076_BURM9 BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A1UY92|A1UY92_BURMS BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|B7CQT5|B7CQT5_BURPS BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|B2HB93|B2HB93_BURPS BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|B1H874|B1H874_BURPS BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A9K6T6|A9K6T6_BURMA BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A8KEK1|A8KEK1_BURPS BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A8ENC8|A8ENC8_BURPS BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A5XVM7|A5XVM7_BURMA BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A5J9P2|A5J9P2_BURMA BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A4LFP7|A4LFP7_BURPS BNR/Asp-box repeat protein OS=Burkholderi... 34 4.8
tr|A6PLZ6|A6PLZ6_9BACT Putative uncharacterized protein OS=Victi... 33 8.1

>tr|A7MX71|A7MX71_VIBHB Putative uncharacterized protein OS=Vibrio
harveyi (strain ATCC BAA-1116 / BB120) GN=VIBHAR_00117
PE=4 SV=1
Length = 598

Score = 36.6 bits (83), Expect = 0.74
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2

Query: 53 PVVNGRWPNS-KADLSSQGRPHMGGLEGLIWTYSHKGGYTWLSLIREGNPF 202
P V G W NS +A S+ G P + + G +T S + +TW S E NP+
Sbjct: 444 PYVLGAWVNSWRASESNAGLPDINTVYGYTFTQSGQASWTWTSYDEEDNPY 494


>tr|B5Y4W2|B5Y4W2_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATR_43954 PE=4 SV=1
Length = 771

Score = 35.8 bits (81), Expect = 1.3
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -1

Query: 142 PNQTLQSAHVWPPLRRQVRF*IRPPAIDYRPPVNQPVVFRPLSG 11
P Q QS + PP ++Q + + P ++ Y P + QP F PLSG
Sbjct: 639 PLQPQQSYNAGPPPQQQQIYGMTPDSVSYNPTMQQPPSFGPLSG 682


>tr|A0Z0P5|A0Z0P5_9GAMM Exoribonuclease R OS=marine gamma
proteobacterium HTCC2080 GN=MGP2080_05732 PE=3 SV=1
Length = 688

Score = 34.7 bits (78), Expect = 2.8
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +2

Query: 47 RWPVVNGRWPNSKADLSSQGRPHMGGLE--------GLIWTYSHKGGYTWLSLIREGNPF 202
R P +G+ P++K LS G P GLE GL W +S K TW+ E P
Sbjct: 168 RHPFKDGK-PSAKV-LSVFGSPGTPGLENRYCAARAGLTWAWSDKESATWIKFAEEREPL 225

Query: 203 GL*KEAISTHIS*CEVDATR 262
+ +H++ +DA R
Sbjct: 226 SDPERVDLSHLNFVSIDAAR 245


>tr|Q63J05|Q63J05_BURPS Putative membrane protein OS=Burkholderia
pseudomallei GN=BPSS1911 PE=4 SV=1
Length = 494

Score = 33.9 bits (76), Expect = 4.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2

Query: 32 NRLVDRWPVVNGRWPNSKADLSSQGRPHMGGLEGLIWTYSHKGGYTW 172
N V+ W VN P++ Q R GG GL+ YS GG TW
Sbjct: 68 NAEVEPWVAVNPANPSNVIGAWQQDRWSNGGAHGLVAGYSFDGGLTW 114


>tr|Q62E71|Q62E71_BURMA BNR/Asp-box repeat protein OS=Burkholderia
mallei GN=BMAA0177 PE=4 SV=1
Length = 428

Score = 33.9 bits (76), Expect = 4.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2

Query: 32 NRLVDRWPVVNGRWPNSKADLSSQGRPHMGGLEGLIWTYSHKGGYTW 172
N V+ W VN P++ Q R GG GL+ YS GG TW
Sbjct: 2 NAEVEPWVAVNPANPSNVIGAWQQDRWSNGGAHGLVAGYSFDGGLTW 48


>tr|Q3JJT6|Q3JJT6_BURP1 BNR/Asp-box repeat protein OS=Burkholderia
pseudomallei (strain 1710b) GN=BURPS1710b_A1008 PE=4
SV=1
Length = 479

Score = 33.9 bits (76), Expect = 4.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2

Query: 32 NRLVDRWPVVNGRWPNSKADLSSQGRPHMGGLEGLIWTYSHKGGYTW 172
N V+ W VN P++ Q R GG GL+ YS GG TW
Sbjct: 53 NAEVEPWVAVNPANPSNVIGAWQQDRWSNGGAHGLVAGYSFDGGLTW 99


>tr|A3P8G3|A3P8G3_BURP0 BNR/Asp-box repeat protein OS=Burkholderia
pseudomallei (strain 1106a) GN=BURPS1106A_A2593 PE=4
SV=1
Length = 479

Score = 33.9 bits (76), Expect = 4.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2

Query: 32 NRLVDRWPVVNGRWPNSKADLSSQGRPHMGGLEGLIWTYSHKGGYTW 172
N V+ W VN P++ Q R GG GL+ YS GG TW
Sbjct: 53 NAEVEPWVAVNPANPSNVIGAWQQDRWSNGGAHGLVAGYSFDGGLTW 99


>tr|A3NN07|A3NN07_BURP6 BNR/Asp-box repeat protein OS=Burkholderia
pseudomallei (strain 668) GN=BURPS668_A2736 PE=4 SV=1
Length = 479

Score = 33.9 bits (76), Expect = 4.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2

Query: 32 NRLVDRWPVVNGRWPNSKADLSSQGRPHMGGLEGLIWTYSHKGGYTW 172
N V+ W VN P++ Q R GG GL+ YS GG TW
Sbjct: 53 NAEVEPWVAVNPANPSNVIGAWQQDRWSNGGAHGLVAGYSFDGGLTW 99


>tr|A3MAX3|A3MAX3_BURM7 BNR/Asp-box repeat protein OS=Burkholderia
mallei (strain NCTC 10247) GN=BMA10247_A0204 PE=4 SV=1
Length = 479

Score = 33.9 bits (76), Expect = 4.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2

Query: 32 NRLVDRWPVVNGRWPNSKADLSSQGRPHMGGLEGLIWTYSHKGGYTW 172
N V+ W VN P++ Q R GG GL+ YS GG TW
Sbjct: 53 NAEVEPWVAVNPANPSNVIGAWQQDRWSNGGAHGLVAGYSFDGGLTW 99


>tr|A2S076|A2S076_BURM9 BNR/Asp-box repeat protein OS=Burkholderia
mallei (strain NCTC 10229) GN=BMA10229_1545 PE=4 SV=1
Length = 458

Score = 33.9 bits (76), Expect = 4.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2

Query: 32 NRLVDRWPVVNGRWPNSKADLSSQGRPHMGGLEGLIWTYSHKGGYTW 172
N V+ W VN P++ Q R GG GL+ YS GG TW
Sbjct: 32 NAEVEPWVAVNPANPSNVIGAWQQDRWSNGGAHGLVAGYSFDGGLTW 78