BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911656|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_F03.
         (222 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P93740|NUD23_ARATH Nudix hydrolase 23, chloroplastic OS=Arabi...    32   0.97 
sp|A4XL70|IF2_CALS8 Translation initiation factor IF-2 OS=Caldic...    29   6.3  
sp|Q86WI3|NLRC5_HUMAN Protein NLRC5 OS=Homo sapiens GN=NLRC5 PE=...    29   8.2  

>sp|P93740|NUD23_ARATH Nudix hydrolase 23, chloroplastic
           OS=Arabidopsis thaliana GN=NUDT23 PE=2 SV=2
          Length = 280

 Score = 32.0 bits (71), Expect = 0.97
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -1

Query: 222 LKVHHGVIDKRVGASPSDPAGYAVRDHI 139
           LK H+G I+KR G+SPSD   +++  H+
Sbjct: 251 LKFHYGTINKRPGSSPSDIRAFSLDYHL 278


>sp|A4XL70|IF2_CALS8 Translation initiation factor IF-2
           OS=Caldicellulosiruptor saccharolyticus (strain ATCC
           43494 / DSM 8903) GN=infB PE=3 SV=1
          Length = 858

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
 Frame = +3

Query: 33  ESSTPCVSASLDAII-------E*GTLILQGEVMTSVIYFRYRYDPLQHSQQGLKGLLQP 191
           ES     SAS DAII       E G + L  +    +  +R  YD +   +  +KGLL+P
Sbjct: 701 ESDVTLASAS-DAIIIGFNVRPEVGAMSLAEKEKVDIRMYRIIYDVINDIKAAMKGLLEP 759

Query: 192 AYQ 200
            Y+
Sbjct: 760 VYK 762


>sp|Q86WI3|NLRC5_HUMAN Protein NLRC5 OS=Homo sapiens GN=NLRC5 PE=2
           SV=2
          Length = 1866

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +3

Query: 18  GTQTQESSTPCVSASLDAIIE*GTLILQGEVMTSVIYFRYRYDPLQHSQQGLKGLLQPAY 197
           G+ T +S   CV   L+  ++   L+L            + YD    SQ G +G  QP  
Sbjct: 65  GSDTWQSFIHCVCMQLEVPLDLEVLLLS----------TFGYDDGFTSQLGAEGKSQPES 114

Query: 198 Q*HHGV 215
           Q HHG+
Sbjct: 115 QLHHGL 120

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911656|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_F03.
         (222 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SLI7|A9SLI7_PHYPA Predicted protein OS=Physcomitrella paten...    47   4e-04
tr|A8J286|A8J286_CHLRE MutT/NUDIX hydrolase OS=Chlamydomonas rei...    45   0.002
tr|B4FPF6|B4FPF6_MAIZE Putative uncharacterized protein OS=Zea m...    34   3.2  
tr|B4F8F0|B4F8F0_MAIZE Putative uncharacterized protein OS=Zea m...    33   7.1  

>tr|A9SLI7|A9SLI7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_131969 PE=3 SV=1
          Length = 203

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = -1

Query: 222 LKVHHGVIDKRVGASPSDPAGYAVRDHI 139
           ++ HHGVI KR GASPSDP GY VRDH+
Sbjct: 174 IRHHHGVIVKRPGASPSDPLGYVVRDHL 201


>tr|A8J286|A8J286_CHLRE MutT/NUDIX hydrolase OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_205772 PE=3 SV=1
          Length = 277

 Score = 44.7 bits (104), Expect = 0.002
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = -1

Query: 219 KVHHGVIDKRVGASPSDPAGYAVRDHICI 133
           + HHGVIDKR G+ P+DP  +A+RDH+ +
Sbjct: 233 RAHHGVIDKRPGSQPNDPGAFALRDHMAL 261


>tr|B4FPF6|B4FPF6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 264

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = -1

Query: 222 LKVHHGVIDKRVGASPSDPAGYAVRDHICI 133
           +K H+ +I+KR+GASPSD   + + +HI +
Sbjct: 235 IKYHYCIINKRLGASPSDLRSFDIDNHIAV 264


>tr|B4F8F0|B4F8F0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 262

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -1

Query: 222 LKVHHGVIDKRVGASPSDPAGYAVRDHICI 133
           +K H+  I+KR+GASPSD   + + +HI +
Sbjct: 233 IKFHYCTINKRLGASPSDLRSFDIDNHIAV 262