BP911658
Clone id YMU001_000007_F06
Library
Length 432
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000007_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATCATACACTCTGTGTGTGCTGTGTGCAGAGCTCGCTTTCCGGCATAGCCTGCGAAAGAG
GAAGCTCTGCCAAGCCTCAATTTTGCGCGATCTCTCATCGCCCATTTCTCATTTTCATCT
GTAATTGCTCTTTCATCTGCTTATTCCGCCATTTCGACTCTATTGTATATTGCCCACGTG
ATCGTAAAGCACCAAAATCTCGAGTCTTCCATGGCCATTCTCTGACGAAGGTTGTGAATA
TCGGGTGAACACGCTTTCGTCTACTCCAACATCTACCGAAGCTCTCCTTGCATTCTGCCA
TCTGCGCCCCTTCGTGTTCATGGGTGCAGTATCATCTTCATAACCAGGACCGGAGATTAT
GTAAATTGCCCACGATCTCAAAGGAATTCTTAATGGCAGCAACAGCAGCAGCAGCAGGTA
GCTCCCATTGCT
■■Homology search results ■■ -
sp_hit_id P34136
Definition sp|P34136|HMDH2_DICDI 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Dictyostelium discoideum
Align length 53
Score (bit) 31.2
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911658|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_F06.
(432 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P34136|HMDH2_DICDI 3-hydroxy-3-methylglutaryl-coenzyme A redu... 31 1.9
sp|Q8D2Y4|GPMA_WIGBR 2,3-bisphosphoglycerate-dependent phosphogl... 31 2.5
sp|Q3SRU9|LIPB_NITWN Octanoyltransferase OS=Nitrobacter winograd... 30 3.3
sp|Q1QLD9|LIPB_NITHX Octanoyltransferase OS=Nitrobacter hamburge... 30 4.3
sp|Q2QDA7|MATK_CUCSA Maturase K OS=Cucumis sativus GN=matK PE=3 ... 29 7.3
sp|Q54QR1|LIMA_DICDI LIM domain-containing protein A OS=Dictyost... 29 9.3

>sp|P34136|HMDH2_DICDI 3-hydroxy-3-methylglutaryl-coenzyme A
reductase 2 OS=Dictyostelium discoideum GN=hmgB PE=2
SV=2
Length = 526

Score = 31.2 bits (69), Expect = 1.9
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1

Query: 61 EALPSLNFARSLIAHFSFSSVIALSSAYSAISTLLYIAHVIVKHQNLESSMAI 219
EAL SLN ++LI S+ ++ S I T LYIA QN+ESS I
Sbjct: 360 EALVSLNIDKNLIGSAMAGSIGGFNAHASNIVTALYIATGQDPAQNVESSNCI 412


>sp|Q8D2Y4|GPMA_WIGBR 2,3-bisphosphoglycerate-dependent
phosphoglycerate mutase OS=Wigglesworthia glossinidia
brevipalpis GN=gpmA PE=3 SV=1
Length = 234

Score = 30.8 bits (68), Expect = 2.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -3

Query: 289 KESFGRCWSRRKRVHPIFTTFVREWPWKTRDFGALRSRGQYTIESKWRNKQMKE 128
K + W K ++ + + W R +GAL+ +Y IE K+ Q+ E
Sbjct: 61 KRAIHSLWVILKEINQSWIPVEKSWRLNERHYGALQGFSKYEIEKKYGKNQLNE 114


>sp|Q3SRU9|LIPB_NITWN Octanoyltransferase OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=lipB PE=3
SV=1
Length = 231

Score = 30.4 bits (67), Expect = 3.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1

Query: 372 WAIYIISGPGYEDDTAPMNTKGRRWQNARRASVDVGVDESVF 247
W GPG+ED A + + RRW + S++V D S F
Sbjct: 146 WVARPDKGPGHEDKIAAIGVRLRRWVSFHGVSLNVDPDLSHF 187


>sp|Q1QLD9|LIPB_NITHX Octanoyltransferase OS=Nitrobacter
hamburgensis (strain X14 / DSM 10229) GN=lipB PE=3 SV=1
Length = 241

Score = 30.0 bits (66), Expect = 4.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1

Query: 372 WAIYIISGPGYEDDTAPMNTKGRRWQNARRASVDVGVDESVF 247
W GPG+ED A + + RRW + S++V D S F
Sbjct: 146 WVARPDKGPGHEDKIAAIGVRLRRWVSFHGISLNVDPDLSHF 187


>sp|Q2QDA7|MATK_CUCSA Maturase K OS=Cucumis sativus GN=matK PE=3
SV=1
Length = 504

Score = 29.3 bits (64), Expect = 7.3
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1

Query: 103 HFSFSSVIALSSAYSAISTLLYIAHVIVK--HQNLESSMAIL*RRL*ISGEHAFVYSNIY 276
HF S++ +S Y S+LL + H+I + HQN H F ++N Y
Sbjct: 35 HFLNGSILLENSGYDKKSSLLMVKHLITRMYHQN-----------------HFFFFTNYY 77

Query: 277 RSSP 288
+P
Sbjct: 78 NKNP 81


>sp|Q54QR1|LIMA_DICDI LIM domain-containing protein A
OS=Dictyostelium discoideum GN=limA PE=2 SV=1
Length = 1183

Score = 28.9 bits (63), Expect = 9.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3

Query: 105 FLIFICNCSFICLFRHFDSIVYCPRDRKAPK 197
F+ CNCS ++ D + YC D K P+
Sbjct: 29 FVCVSCNCSLSDVYFEIDKLPYCELDYKKPR 59


tr_hit_id A5DUH6
Definition tr|A5DUH6|A5DUH6_LODEL Activator 1 95 kDa subunit OS=Lodderomyces elongisporus
Align length 54
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911658|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_F06.
(432 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5DUH6|A5DUH6_LODEL Activator 1 95 kDa subunit OS=Lodderomyce... 35 2.5
tr|A5DT44|A5DT44_LODEL Putative uncharacterized protein OS=Lodde... 34 3.2
tr|A9TLP0|A9TLP0_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.2
tr|A2R780|A2R780_ASPNC Contig An16c0090, complete genome. OS=Asp... 34 4.2
tr|A8J7U4|A8J7U4_CHLRE Predicted protein (Fragment) OS=Chlamydom... 34 4.2
tr|B6FC71|B6FC71_9ENTR Putative uncharacterized protein OS=Enter... 33 5.5
tr|Q6BMH9|Q6BMH9_DEBHA DEHA2F05324p OS=Debaryomyces hansenii GN=... 33 9.3

>tr|A5DUH6|A5DUH6_LODEL Activator 1 95 kDa subunit OS=Lodderomyces
elongisporus GN=LELG_01012 PE=4 SV=1
Length = 709

Score = 34.7 bits (78), Expect = 2.5
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3

Query: 15 VCCVQSSLSGIAC--ERGSSAKPQFCAISHRPFLIFICNCSFICLFRHFDSIVY 170
+C + + G++ G+ A QFC I++ P LI ICN + R FD + Y
Sbjct: 274 ICLIMDEVDGMSSGDHGGAGALSQFCRITNTP-LILICNDKSLPKMRTFDKVTY 326


>tr|A5DT44|A5DT44_LODEL Putative uncharacterized protein
OS=Lodderomyces elongisporus GN=LELG_00530 PE=4 SV=1
Length = 1024

Score = 34.3 bits (77), Expect = 3.2
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Frame = -3

Query: 259 RKRVHPIFTTFVREWPWKTRDFGALRSRGQYTIESKWRNKQMKEQL---------QMKMR 107
R+ V+ FTT V P T FG Q T+ S + +QM++QL Q + +
Sbjct: 428 RQLVNHRFTTSVSS-PSLTTVFGV----NQNTMNSSLQRQQMQQQLLQQQQQQQQQQQPQ 482

Query: 106 NGR*EIAQN*GLAELPLSQAMPESELCTQHTQ 11
G Q+ L +LP P S+L T HTQ
Sbjct: 483 QGYQPHDQSQPLVQLPTQNTQPRSQLWTMHTQ 514


>tr|A9TLP0|A9TLP0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_94343 PE=4 SV=1
Length = 352

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -1

Query: 312 KGRRWQNARRASVDVGVDESVFTRYSQPSSENGHGRLEI 196
+G RWQ RR S GV + F R + S NGH R+E+
Sbjct: 148 RGFRWQTRRRGSRR-GVVKGAFMRRQEGSKSNGHARVEV 185


>tr|A2R780|A2R780_ASPNC Contig An16c0090, complete genome.
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=An16g02590 PE=4 SV=1
Length = 758

Score = 33.9 bits (76), Expect = 4.2
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = -1

Query: 345 GYEDDTAPMNTKGRRWQNARRASVDVGVDES---VFTRYSQPSSENGHGRLEILVLYDHV 175
G DD++P K R + AR++++DV D+S + T+ PS R+EI ++ D+
Sbjct: 486 GSVDDSSPSAQKATRTKKARKSTLDVFSDDSAEDLMTQLPDPSHATETPRVEIQIIGDNN 545

Query: 174 GNI 166
+I
Sbjct: 546 SSI 548


>tr|A8J7U4|A8J7U4_CHLRE Predicted protein (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_176471 PE=4
SV=1
Length = 247

Score = 33.9 bits (76), Expect = 4.2
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2

Query: 206 LPWPFSDEGCEYRVNTLSSTPTSTEALLAFCHLRPFVFMGAVSSS 340
LPWP + C++ SS P ALLA CH+ P F G +S+S
Sbjct: 53 LPWPHTKRVCQF-----SSRPDLVAALLASCHI-PRYFNGELSTS 91


>tr|B6FC71|B6FC71_9ENTR Putative uncharacterized protein
OS=Enterobacter cancerogenus ATCC 35316 GN=ENTCAN_02321
PE=4 SV=1
Length = 182

Score = 33.5 bits (75), Expect = 5.5
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2

Query: 197 ISSLPWPFSDEGCEYRVNTLS 259
+SS+PWP+ D+G EY VN ++
Sbjct: 38 VSSVPWPYPDDGAEYYVNNVA 58


>tr|Q6BMH9|Q6BMH9_DEBHA DEHA2F05324p OS=Debaryomyces hansenii
GN=DEHA2F05324g PE=4 SV=2
Length = 794

Score = 32.7 bits (73), Expect = 9.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3

Query: 268 WSRRKRVHPIFTTFVREWPWKTRDFGALRSRGQYTIESKWRNKQMK 131
W + K++HPI T +E P R+F ++ S +Y ++ ++ K K
Sbjct: 538 WDKYKKLHPITTIKDQESPQNFRNFSSILSYARYLYDTGFKKKTSK 583