BP911664 |
Clone id |
YMU001_000007_F12 |
Library |
YMU01 |
Length |
446 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000007_F12. |
Accession |
BP911664 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATTGCAAGCTGGTTACCTGGATGCTTAGAAACAACAGTGCCAGCAGGCCTCAAGATACCG TCCCCGAACCTAGGGCAATCTGCCACTCTCTATCCATAATTTAGAGATGGGCCTGTTCAA ATATGGTACTTGGCAAAAGAAACATTTAAAGCTTTGCCTTCAGTAAAGACCAAAGTACAG CATAATTGGGTTGCAAGCAAAACCCAGTTAGAAATTACAGAACCGAATACTTCCCAGGTC GACCACCACTTGGGAGGGCTAAAGCTGCGGCAGTGCACTCCTCTAATAACCGTTTGATTT CTGCCTTGGCCTTCTTGACAGAATTTTCAGAGGGGCCCTCAATAAATAGATATAACTTTC TCTCGCCAGGTGCCGGTACTTTGCCAGGAGGAAAATACTGCCCACGAGTTGTGATGGCTG CTTCGGTCCAATCGCTGATAGGACCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8H0U8 |
Definition |
sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana |
Align length |
76 |
Score (bit) |
100.0 |
E-value |
4.0e-21 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TSN9 |
Definition |
tr|A9TSN9|A9TSN9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
76 |
Score (bit) |
108.0 |
E-value |
1.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911664|Adiantum capillus-veneris mRNA, clone: YMU001_000007_F12. (446 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TSN9|A9TSN9_PHYPA Predicted protein OS=Physcomitrella paten... 108 1e-22 tr|A7P8T9|A7P8T9_VITVI Chromosome chr3 scaffold_8, whole genome ... 101 2e-20 tr|A8MQH2|A8MQH2_ARATH Uncharacterized protein At1g20920.2 OS=Ar... 100 5e-20 tr|B8BAX3|B8BAX3_ORYSI Putative uncharacterized protein OS=Oryza... 91 4e-17 tr|A3BPV3|A3BPV3_ORYSJ Putative uncharacterized protein OS=Oryza... 91 4e-17 tr|A3BPQ7|A3BPQ7_ORYSJ Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|A7S034|A7S034_NEMVE Predicted protein OS=Nematostella vectens... 74 4e-12 tr|A8K6X3|A8K6X3_HUMAN cDNA FLJ78679, highly similar to Homo sap... 69 9e-11 tr|B3S7I1|B3S7I1_TRIAD Putative uncharacterized protein OS=Trich... 68 2e-10 tr|A3KMS1|A3KMS1_DANRE Ddx46 protein (Fragment) OS=Danio rerio G... 67 3e-10 tr|B6PT55|B6PT55_BRAFL Putative uncharacterized protein OS=Branc... 66 1e-09 tr|B6L4I9|B6L4I9_BRAFL Putative uncharacterized protein OS=Branc... 66 1e-09 tr|Q4RS24|Q4RS24_TETNG Chromosome 7 SCAF15001, whole genome shot... 65 2e-09 tr|Q012E3|Q012E3_OSTTA DEAD-box protein abstrakt (ISS) OS=Ostreo... 64 5e-09 tr|Q5DNU4|Q5DNU4_CHOFU DEAD box RNA helicase OS=Choristoneura fu... 62 1e-08 tr|A8J3N3|A8J3N3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 62 1e-08 tr|B0WGF2|B0WGF2_CULQU Putative uncharacterized protein OS=Culex... 62 2e-08 tr|B7Q0R9|B7Q0R9_IXOSC ATP-dependent RNA helicase, putative (Fra... 61 3e-08 tr|Q7QE45|Q7QE45_ANOGA AGAP010656-PA (Fragment) OS=Anopheles gam... 60 4e-08 tr|A4S294|A4S294_OSTLU Predicted protein OS=Ostreococcus lucimar... 60 5e-08 tr|Q29G56|Q29G56_DROPS GA19457 OS=Drosophila pseudoobscura pseud... 60 7e-08 tr|Q16HL1|Q16HL1_AEDAE DEAD box ATP-dependent RNA helicase OS=Ae... 60 7e-08 tr|B4GVY8|B4GVY8_DROPE GL14575 OS=Drosophila persimilis GN=GL145... 60 7e-08 tr|Q9VXW2|Q9VXW2_DROME CG6227 OS=Drosophila melanogaster GN=CG62... 59 9e-08 tr|Q95TU3|Q95TU3_DROME LD21880p OS=Drosophila melanogaster GN=CG... 59 9e-08 tr|B4R566|B4R566_DROSI GD17208 OS=Drosophila simulans GN=GD17208... 59 9e-08 tr|B4PWL8|B4PWL8_DROYA GE17181 OS=Drosophila yakuba GN=GE17181 P... 59 9e-08 tr|B4MSR4|B4MSR4_DROWI GK20023 OS=Drosophila willistoni GN=GK200... 59 9e-08 tr|B4M7U8|B4M7U8_DROVI GJ17053 OS=Drosophila virilis GN=GJ17053 ... 59 9e-08 tr|B4L2J1|B4L2J1_DROMO GI15175 OS=Drosophila mojavensis GN=GI151... 59 9e-08
>tr|A9TSN9|A9TSN9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_149955 PE=3 SV=1 Length = 1072
Score = 108 bits (271), Expect = 1e-22 Identities = 54/76 (71%), Positives = 59/76 (77%) Frame = -2
Query: 445 GPISDWTEAAITTRGQYFPPGKVPAPGERKLYLFIEGPSENSVKKAKAEIKRXXXXXXXX 266 G IS+WT AAITTRGQYFPPGKVPAPGERKL+LFIEGP+E SVKKAKAE+KR Sbjct: 997 GQISEWTGAAITTRGQYFPPGKVPAPGERKLFLFIEGPTEASVKKAKAEVKRILEESTSA 1056
Query: 265 XXXLPSGGRPGKYSVL 218 LP +PGKYSVL Sbjct: 1057 AIQLPGPAQPGKYSVL 1072
>tr|A7P8T9|A7P8T9_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036305001 PE=4 SV=1 Length = 971
Score = 101 bits (252), Expect = 2e-20 Identities = 49/75 (65%), Positives = 56/75 (74%) Frame = -2
Query: 442 PISDWTEAAITTRGQYFPPGKVPAPGERKLYLFIEGPSENSVKKAKAEIKRXXXXXXXXX 263 PIS+WT AAITTRGQY+ GKVP PGERKLYLFIEGP+E SVK+AKAE+KR Sbjct: 896 PISEWTGAAITTRGQYYTTGKVPGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDFTIQA 955
Query: 262 XXLPSGGRPGKYSVL 218 PS +PGKYSV+ Sbjct: 956 ISNPSAVQPGKYSVV 970
>tr|A8MQH2|A8MQH2_ARATH Uncharacterized protein At1g20920.2 OS=Arabidopsis thaliana GN=At1g20920 PE=3 SV=1 Length = 828
Score = 100 bits (248), Expect = 5e-20 Identities = 48/76 (63%), Positives = 55/76 (72%) Frame = -2
Query: 445 GPISDWTEAAITTRGQYFPPGKVPAPGERKLYLFIEGPSENSVKKAKAEIKRXXXXXXXX 266 GPIS+WT AAITTRGQ++P G++P PGERKLYLFIEGPSE SVK AKAE+KR Sbjct: 753 GPISEWTGAAITTRGQFYPTGRIPGPGERKLYLFIEGPSEKSVKHAKAELKRVLEDITNQ 812
Query: 265 XXXLPSGGRPGKYSVL 218 GG G+YSVL Sbjct: 813 AMSSLPGGASGRYSVL 828
>tr|B8BAX3|B8BAX3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27901 PE=4 SV=1 Length = 1049
Score = 90.5 bits (223), Expect = 4e-17 Identities = 45/76 (59%), Positives = 52/76 (68%) Frame = -2
Query: 445 GPISDWTEAAITTRGQYFPPGKVPAPGERKLYLFIEGPSENSVKKAKAEIKRXXXXXXXX 266 GPI +WT AAITTRG +FP GK+ ERKLYLFIEGP+E SVKKAKAE+KR Sbjct: 974 GPIQEWTGAAITTRGTFFPQGKIVGANERKLYLFIEGPTELSVKKAKAELKRVLEDCANH 1033
Query: 265 XXXLPSGGRPGKYSVL 218 LP + GKYSV+ Sbjct: 1034 ALNLPGSAQTGKYSVI 1049
>tr|A3BPV3|A3BPV3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025075 PE=3 SV=1 Length = 1039
Score = 90.5 bits (223), Expect = 4e-17 Identities = 45/76 (59%), Positives = 52/76 (68%) Frame = -2
Query: 445 GPISDWTEAAITTRGQYFPPGKVPAPGERKLYLFIEGPSENSVKKAKAEIKRXXXXXXXX 266 GPI +WT AAITTRG +FP GK+ ERKLYLFIEGP+E SVKKAKAE+KR Sbjct: 964 GPIQEWTGAAITTRGTFFPQGKIVGANERKLYLFIEGPTELSVKKAKAELKRVLEDCANH 1023
Query: 265 XXXLPSGGRPGKYSVL 218 LP + GKYSV+ Sbjct: 1024 ALNLPGSAQTGKYSVI 1039
>tr|A3BPQ7|A3BPQ7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025029 PE=4 SV=1 Length = 1574
Score = 84.7 bits (208), Expect = 2e-15 Identities = 42/72 (58%), Positives = 48/72 (66%) Frame = -2
Query: 445 GPISDWTEAAITTRGQYFPPGKVPAPGERKLYLFIEGPSENSVKKAKAEIKRXXXXXXXX 266 GPI DWTEAAITTRG + P GK+ ERKLYLFIEGP+E SVKKAK+E+KR Sbjct: 1443 GPIQDWTEAAITTRGTFIPQGKIVGANERKLYLFIEGPTELSVKKAKSELKRVLEDCANH 1502
Query: 265 XXXLPSGGRPGK 230 LP + GK Sbjct: 1503 ALNLPGSAQTGK 1514
>tr|A7S034|A7S034_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g164776 PE=3 SV=1 Length = 794
Score = 73.9 bits (180), Expect = 4e-12 Identities = 35/74 (47%), Positives = 47/74 (63%) Frame = -2
Query: 439 ISDWTEAAITTRGQYFPPGKVPAPGERKLYLFIEGPSENSVKKAKAEIKRXXXXXXXXXX 260 I++++E A+T RG YFPPGK P GERK+YL+IEGPSE +++ AK+EIKR Sbjct: 721 ITEYSECAVTVRGTYFPPGKEPKEGERKIYLYIEGPSERAIQLAKSEIKRIVKEELVRLG 780
Query: 259 XLPSGGRPGKYSVL 218 G+Y VL Sbjct: 781 TYRGPQPTGRYKVL 794
>tr|A8K6X3|A8K6X3_HUMAN cDNA FLJ78679, highly similar to Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 (DDX46), mRNA OS=Homo sapiens PE=2 SV=1 Length = 1032
Score = 69.3 bits (168), Expect = 9e-11 Identities = 37/74 (50%), Positives = 45/74 (60%) Frame = -2
Query: 439 ISDWTEAAITTRGQYFPPGKVPAPGERKLYLFIEGPSENSVKKAKAEIKRXXXXXXXXXX 260 IS+++EAAIT RG YFPPGK P GERK+YL IE +E +V+KAKAEI R Sbjct: 959 ISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQ 1018
Query: 259 XLPSGGRPGKYSVL 218 G+Y VL Sbjct: 1019 NSYQPTNKGRYKVL 1032
>tr|B3S7I1|B3S7I1_TRIAD Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_30653 PE=4 SV=1 Length = 976
Score = 68.2 bits (165), Expect = 2e-10 Identities = 30/50 (60%), Positives = 40/50 (80%) Frame = -2
Query: 439 ISDWTEAAITTRGQYFPPGKVPAPGERKLYLFIEGPSENSVKKAKAEIKR 290 I++ +E +IT RG YFPPGK P G+RK+YL++EGP+E SV+ A AEIKR Sbjct: 897 ITELSECSITVRGTYFPPGKEPGEGQRKIYLYLEGPNERSVQIATAEIKR 946
>tr|A3KMS1|A3KMS1_DANRE Ddx46 protein (Fragment) OS=Danio rerio GN=ddx46 PE=2 SV=1 Length = 1032
Score = 67.4 bits (163), Expect = 3e-10 Identities = 36/74 (48%), Positives = 44/74 (59%) Frame = -2
Query: 439 ISDWTEAAITTRGQYFPPGKVPAPGERKLYLFIEGPSENSVKKAKAEIKRXXXXXXXXXX 260 I +++EAAIT RG YFPPGK P GERK+YL IE +E +V+KAKAEI R Sbjct: 959 IGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQ 1018
Query: 259 XLPSGGRPGKYSVL 218 G+Y VL Sbjct: 1019 NSYQPTSKGRYKVL 1032
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