BP911665 |
Clone id |
YMU001_000007_G02 |
Library |
YMU01 |
Length |
497 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000007_G02. |
Accession |
BP911665 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3830Contig1 |
Sequence |
AGGGCAGGCTGCATTTAGAGGGCTCTGTAAAGACAACCAAGTTGAAGTTGACATGGTTAG CTGATTTTGCAGAGCTTGTAAATCTTGCTTTGATCGACTTGGATCACCTTATCACCAAGA AAAAGCTAGAAGAAGAAGATGATTTCATTTCAGTTCTCAACCCAACAACCCGATGGGAAA TCCAGGCTCTGGGTGATGCAAATATGAGGAACCTCAAACGTGGTGATATTATTCAGCTAG AGAGAAAGGGCTACTTCATATGTGACTCGCCCTACATAAGGCCATTGAAGCCAATTGCAC TTATTGCTATTCCAGATGGAAGACAACGGCCAACCCCAGAACACTTACCTCAAAAGTAAT GTTTTGGCTACAAGCACATGCGTATTGATCTTGTCTTGCATAAAATTTATATTTCTGAGG ACTACAGTTTAGGGTGCCATGAACTCCTCATAGAAATTACAGCATTAATTTGAAATTTGA AAACAACAACCATTACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46655 |
Definition |
sp|P46655|SYEC_YEAST Glutamyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae |
Align length |
106 |
Score (bit) |
102.0 |
E-value |
1.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911665|Adiantum capillus-veneris mRNA, clone: YMU001_000007_G02. (497 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P46655|SYEC_YEAST Glutamyl-tRNA synthetase, cytoplasmic OS=Sa... 102 1e-21 sp|O13775|SYEC_SCHPO Probable glutamyl-tRNA synthetase, cytoplas... 96 9e-20 sp|Q54KB8|SYEC_DICDI Probable glutamyl-tRNA synthetase, cytoplas... 90 7e-18 sp|Q8CGC7|SYEP_MOUSE Bifunctional aminoacyl-tRNA synthetase OS=M... 85 2e-16 sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=H... 83 8e-16 sp|P28668|SYEP_DROME Bifunctional aminoacyl-tRNA synthetase OS=D... 73 6e-13 sp|Q2NUP0|SYQ_SODGM Glutaminyl-tRNA synthetase OS=Sodalis glossi... 44 4e-04 sp|Q3Z4C0|SYQ_SHISS Glutaminyl-tRNA synthetase OS=Shigella sonne... 42 0.002 sp|Q83LY4|SYQ_SHIFL Glutaminyl-tRNA synthetase OS=Shigella flexn... 42 0.002 sp|Q0T6S8|SYQ_SHIF8 Glutaminyl-tRNA synthetase OS=Shigella flexn... 42 0.002 sp|Q32IQ0|SYQ_SHIDS Glutaminyl-tRNA synthetase OS=Shigella dysen... 42 0.002 sp|Q324M4|SYQ_SHIBS Glutaminyl-tRNA synthetase OS=Shigella boydi... 42 0.002 sp|Q1REN7|SYQ_ECOUT Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|P00962|SYQ_ECOLI Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|B1IY48|SYQ_ECOLC Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|Q8FJW4|SYQ_ECOL6 Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|Q0TK03|SYQ_ECOL5 Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|A1A8U7|SYQ_ECOK1 Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|A7ZXU0|SYQ_ECOHS Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|Q8X9H8|SYQ_ECO57 Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|A7ZJ63|SYQ_ECO24 Glutaminyl-tRNA synthetase OS=Escherichia co... 42 0.002 sp|Q8ZQX5|SYQ_SALTY Glutaminyl-tRNA synthetase OS=Salmonella typ... 40 0.008 sp|Q8Z8F8|SYQ_SALTI Glutaminyl-tRNA synthetase OS=Salmonella typ... 40 0.008 sp|A9MUG5|SYQ_SALPB Glutaminyl-tRNA synthetase OS=Salmonella par... 40 0.008 sp|Q5PCH8|SYQ_SALPA Glutaminyl-tRNA synthetase OS=Salmonella par... 40 0.008 sp|A8AJD6|SYQ_CITK8 Glutaminyl-tRNA synthetase OS=Citrobacter ko... 40 0.008 sp|Q57RP8|SYQ_SALCH Glutaminyl-tRNA synthetase OS=Salmonella cho... 39 0.010 sp|A4W846|SYQ_ENT38 Glutaminyl-tRNA synthetase OS=Enterobacter s... 39 0.010 sp|A6T6C3|SYQ_KLEP7 Glutaminyl-tRNA synthetase OS=Klebsiella pne... 38 0.023 sp|P43831|SYQ_HAEIN Glutaminyl-tRNA synthetase OS=Haemophilus in... 38 0.023
>sp|P46655|SYEC_YEAST Glutamyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=GUS1 PE=1 SV=3 Length = 708
Score = 102 bits (254), Expect = 1e-21 Identities = 51/106 (48%), Positives = 70/106 (66%) Frame = +3
Query: 6 RLHLEGSVKTTKLKLTWLADFAELVNLALIDLDHLITKKKLEEEDDFISVLNPTTRWEIQ 185 +L+LEG K TK KLTWLAD ++V + L+D DHLITK +LEE++ F L P T + Sbjct: 595 KLNLEGDFKKTKHKLTWLADTKDVVPVDLVDFDHLITKDRLEEDESFEDFLTPQTEFHTD 654
Query: 186 ALGDANMRNLKRGDIIQLERKGYFICDSPYIRPLKPIALIAIPDGR 323 A+ D N++++K GDIIQ ERKGY+ D+ + KP IPDG+ Sbjct: 655 AIADLNVKDMKIGDIIQFERKGYYRLDA-LPKDGKPYVFFTIPDGK 699
>sp|O13775|SYEC_SCHPO Probable glutamyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC17A5.15c PE=1 SV=1 Length = 716
Score = 95.9 bits (237), Expect = 9e-20 Identities = 48/105 (45%), Positives = 66/105 (62%) Frame = +3
Query: 9 LHLEGSVKTTKLKLTWLADFAELVNLALIDLDHLITKKKLEEEDDFISVLNPTTRWEIQA 188 LHL+G K T+ K+TWLAD + + L+D D+LITK KLEE +++ L P T + Sbjct: 605 LHLDGDFKKTEKKVTWLADTEDKTPVDLVDFDYLITKDKLEEGENYKDFLTPQTEFHSPV 664
Query: 189 LGDANMRNLKRGDIIQLERKGYFICDSPYIRPLKPIALIAIPDGR 323 D ++NLK+GDIIQ+ERKGY+I D P+ L IPDG+ Sbjct: 665 FADVGIKNLKKGDIIQVERKGYYIVDVPF--DGTQAVLFNIPDGK 707
>sp|Q54KB8|SYEC_DICDI Probable glutamyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=gluS PE=2 SV=1 Length = 764
Score = 89.7 bits (221), Expect = 7e-18 Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 1/111 (0%) Frame = +3
Query: 3 GRLHLEGSVKTTKLKLTWLA-DFAELVNLALIDLDHLITKKKLEEEDDFISVLNPTTRWE 179 G+LHLEG VK T KL+WL+ D A+ V + L D D++ITK KLE+ DD + N +++E Sbjct: 622 GKLHLEGDVKKTDKKLSWLSSDCADTVTVVLQDYDYIITKPKLEDGDDLDTFTNKNSKFE 681
Query: 180 IQALGDANMRNLKRGDIIQLERKGYFICDSPYIRPLKPIALIAIPDGRQRP 332 I+A D N+ LK D IQ ER+G+F D +KP LI IP G +P Sbjct: 682 IEAFTDENILTLKLNDKIQFERRGFFNVDQ-VGDGVKPYILIYIPSGPIKP 731
>sp|Q8CGC7|SYEP_MOUSE Bifunctional aminoacyl-tRNA synthetase OS=Mus musculus GN=Eprs PE=2 SV=3 Length = 1512
Score = 84.7 bits (208), Expect = 2e-16 Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 8/119 (6%) Frame = +3
Query: 6 RLHLEGSVKTTKLKLTWLADFAELVNL--ALIDLDHLITKKKLEEEDDFISVLNPTTRWE 179 +L+LE K+TWLA+ +++ + +HLITK L +++DF +N ++ E Sbjct: 593 KLNLENKDYKKTTKITWLAESTHALSIPAVCVTYEHLITKPVLGKDEDFKQYINKDSKHE 652
Query: 180 IQALGDANMRNLKRGDIIQLERKGYFICDSPY--IRPLK----PIALIAIPDGRQRPTP 338 LGD +++LK+GDIIQL+R+G+FICD PY + P P LI IPDG + P Sbjct: 653 ELMLGDPCLKDLKKGDIIQLQRRGFFICDQPYEPVSPYSCREAPCILIYIPDGHTKEMP 711
>sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=3 Length = 1512
Score = 82.8 bits (203), Expect = 8e-16 Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 8/119 (6%) Frame = +3
Query: 6 RLHLEGSVKTTKLKLTWLADFAELVNLALIDL--DHLITKKKLEEEDDFISVLNPTTRWE 179 + +LE K+TWLA+ + + +I + +HLITK L +++DF +N ++ E Sbjct: 593 KFNLENKDYKKTTKVTWLAETTHALPIPVICVTYEHLITKPVLGKDEDFKQYVNKNSKHE 652
Query: 180 IQALGDANMRNLKRGDIIQLERKGYFICDSPY--IRPLK----PIALIAIPDGRQRPTP 338 LGD +++LK+GDIIQL+R+G+FICD PY + P P LI IPDG + P Sbjct: 653 ELMLGDPCLKDLKKGDIIQLQRRGFFICDQPYEPVSPYSCKEAPCVLIYIPDGHTKEMP 711
>sp|P28668|SYEP_DROME Bifunctional aminoacyl-tRNA synthetase OS=Drosophila melanogaster GN=Aats-glupro PE=1 SV=2 Length = 1714
Score = 73.2 bits (178), Expect = 6e-13 Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Frame = +3
Query: 9 LHLEGSVKTTKLKLTWLA---DFAELVNLALIDLDHLITKKKLEEEDDFISVLNPTTRWE 179 L+LE LKLTWLA D + + D++I+K L +++DF + TR E Sbjct: 600 LNLENKDFKKTLKLTWLAVEDDPSAYPPTFCVYFDNIISKAVLGKDEDFKQFIGHKTRDE 659
Query: 180 IQALGDANMRNLKRGDIIQLERKGYFICDSPYIRPL------KPIALIAIPDGRQRPTP 338 + LGD ++ K+GDIIQL+R+G+F D Y P PI L +IPDG + P Sbjct: 660 VPMLGDPELKKCKKGDIIQLQRRGFFKVDVAYAPPSGYTNVPSPIVLFSIPDGHTKDVP 718
>sp|Q2NUP0|SYQ_SODGM Glutaminyl-tRNA synthetase OS=Sodalis glossinidius (strain morsitans) GN=glnS PE=3 SV=1 Length = 556
Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/65 (33%), Positives = 32/65 (49%) Frame = +3
Query: 102 DHLITKKKLEEEDDFISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIR 281 D L ++ +DF+S LNP + Q +A + G+ Q ER+GYF DS Y Sbjct: 475 DRLFSEANPAAAEDFLSTLNPDSLVIRQGFVEAGVPAANTGEPFQFEREGYFCADSRYFS 534
Query: 282 PLKPI 296 P P+ Sbjct: 535 PTHPV 539
>sp|Q3Z4C0|SYQ_SHISS Glutaminyl-tRNA synthetase OS=Shigella sonnei (strain Ss046) GN=glnS PE=3 SV=1 Length = 554
Score = 41.6 bits (96), Expect = 0.002 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +3
Query: 102 DHLITKKKLEEEDDFISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIR 281 D L + DDF+SV+NP + Q + ++++ G Q ER+GYF DS + Sbjct: 474 DRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHST 533
Query: 282 PLKPI 296 KP+ Sbjct: 534 AEKPV 538
>sp|Q83LY4|SYQ_SHIFL Glutaminyl-tRNA synthetase OS=Shigella flexneri GN=glnS PE=3 SV=1 Length = 554
Score = 41.6 bits (96), Expect = 0.002 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +3
Query: 102 DHLITKKKLEEEDDFISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIR 281 D L + DDF+SV+NP + Q + ++++ G Q ER+GYF DS + Sbjct: 474 DRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHST 533
Query: 282 PLKPI 296 KP+ Sbjct: 534 AEKPV 538
>sp|Q0T6S8|SYQ_SHIF8 Glutaminyl-tRNA synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=glnS PE=3 SV=1 Length = 554
Score = 41.6 bits (96), Expect = 0.002 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +3
Query: 102 DHLITKKKLEEEDDFISVLNPTTRWEIQALGDANMRNLKRGDIIQLERKGYFICDSPYIR 281 D L + DDF+SV+NP + Q + ++++ G Q ER+GYF DS + Sbjct: 474 DRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHST 533
Query: 282 PLKPI 296 KP+ Sbjct: 534 AEKPV 538
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRU5 |
Definition |
tr|B8LRU5|B8LRU5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
109 |
Score (bit) |
179.0 |
E-value |
8.0e-44 |
Report |
|