BP911668 |
Clone id |
YMU001_000007_G06 |
Library |
YMU01 |
Length |
507 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000007_G06. |
Accession |
BP911668 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCTCATTCTTCCAGTGGCTATCCTCCATGCAGCAGCATTTTTTCTAGGCTATGTAATGTC GAAATTTTGCCAGTTTGGAGAATCAACTTCTCGGACAATCTCTATTGAGTGTGGCATGCA GAGCTCGGCTCTTGGCTTTCTTTTGGCACAAAAGCATTTTACCAACCCGCTGGTGGCTGT TCCTTCAGCTGTTAGTGTTGTCTTCATGGCGCTTGGAGGAAGTGCACTTGCTGTATTGTG GAGAAACCGACCCATACCTCTTGATGACAAGGATGATTTCAAGGAGTGAAAAGTTGCACT TATCTTTGTGTCTGAATACTCGAAAGCTAGACTAGGGCTCTGAGTCATAAATGAAGTGTA GGAGACGTGCTCATCTGTTTCAAGTGTATTCTAGGCAGGGAGAACGTGCTGTCGATTTTC CGAGCGGGCAAGAGTGGATGTGGGTATATGCTTTTGTCCTCATGTATGGATTTTTAGGCA TACGTATAATCAAAGGCTTCATTGTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O34524 |
Definition |
sp|O34524|YOCS_BACSU Uncharacterized sodium-dependent transporter yocS OS=Bacillus subtilis |
Align length |
84 |
Score (bit) |
43.9 |
E-value |
0.0004 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q672Q4 |
Definition |
tr|Q672Q4|Q672Q4_SOLLC Putative anion:sodium symporter OS=Solanum lycopersicum |
Align length |
95 |
Score (bit) |
140.0 |
E-value |
3.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911668|Adiantum capillus-veneris mRNA, clone: YMU001_000007_G06. (507 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q672Q4|Q672Q4_SOLLC Putative anion:sodium symporter OS=Solanu... 140 3e-32 tr|A9NUU8|A9NUU8_PICSI Putative uncharacterized protein OS=Picea... 139 6e-32 tr|A7PEW7|A7PEW7_VITVI Chromosome chr11 scaffold_13, whole genom... 137 2e-31 tr|A5BFK8|A5BFK8_VITVI Putative uncharacterized protein OS=Vitis... 137 2e-31 tr|A9T925|A9T925_PHYPA Predicted protein OS=Physcomitrella paten... 135 9e-31 tr|Q8S2V7|Q8S2V7_ARATH Putative sodium-dependent bile acid sympo... 135 1e-30 tr|Q84WD8|Q84WD8_ARATH Putative Na+ dependent ileal bile acid tr... 135 1e-30 tr|Q1EBV7|Q1EBV7_ARATH At2g26900 OS=Arabidopsis thaliana PE=2 SV=1 135 1e-30 tr|A9PIN5|A9PIN5_POPJC Putative uncharacterized protein OS=Popul... 135 1e-30 tr|Q5VRB2|Q5VRB2_ORYSJ cDNA clone:J023014F07, full insert sequen... 133 4e-30 tr|B8ACE5|B8ACE5_ORYSI Putative uncharacterized protein OS=Oryza... 133 4e-30 tr|A2ZVY7|A2ZVY7_ORYSJ Putative uncharacterized protein OS=Oryza... 133 4e-30 tr|O81017|O81017_ARATH Putative Na+ dependent ileal bile acid tr... 93 6e-18 tr|A9RE05|A9RE05_PHYPA Predicted protein OS=Physcomitrella paten... 76 1e-12 tr|B8CAH3|B8CAH3_THAPS Sodium dependent bile acid symporter OS=T... 73 7e-12 tr|B7FWQ7|B7FWQ7_PHATR Predicted protein (Fragment) OS=Phaeodact... 72 2e-11 tr|A5B8X3|A5B8X3_VITVI Putative uncharacterized protein OS=Vitis... 72 2e-11 tr|Q7XVB3|Q7XVB3_ORYSJ Os04g0381100 protein OS=Oryza sativa subs... 70 8e-11 tr|Q01LJ7|Q01LJ7_ORYSA OSIGBa0092E09.1 protein OS=Oryza sativa G... 70 8e-11 tr|A3AT44|A3AT44_ORYSJ Putative uncharacterized protein OS=Oryza... 70 8e-11 tr|A7P290|A7P290_VITVI Chromosome chr19 scaffold_4, whole genome... 69 1e-10 tr|Q016H2|Q016H2_OSTTA Na+-bile acid cotransporter (ISS) OS=Ostr... 69 1e-10 tr|A4RZC9|A4RZC9_OSTLU BASS family transporter: sodium ion/bile ... 67 6e-10 tr|A7QCH3|A7QCH3_VITVI Chromosome chr12 scaffold_78, whole genom... 65 1e-09 tr|A5AMQ2|A5AMQ2_VITVI Putative uncharacterized protein OS=Vitis... 65 1e-09 tr|A4RTN9|A4RTN9_OSTLU BASS family transporter: sodium ion/bile ... 63 9e-09 tr|A5B393|A5B393_VITVI Putative uncharacterized protein OS=Vitis... 62 1e-08 tr|B2A035|B2A035_OPITP Bile acid:sodium symporter OS=Opitutus te... 62 2e-08 tr|Q9SYM6|Q9SYM6_ARATH T30F21.11 protein OS=Arabidopsis thaliana... 61 3e-08 tr|Q93YR2|Q93YR2_ARATH Putative uncharacterized protein T30F21.1... 61 3e-08
>tr|Q672Q4|Q672Q4_SOLLC Putative anion:sodium symporter OS=Solanum lycopersicum PE=2 SV=1 Length = 407
Score = 140 bits (353), Expect = 3e-32 Identities = 73/95 (76%), Positives = 77/95 (81%) Frame = +2
Query: 2 LILPVAILHAAAFFLGYVMSKFCQFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXX 181 L+LPVA LHAAAFFLGY +SKF FGESTSRTISIECGMQSSALGFLLAQKHFTN Sbjct: 314 LLLPVAALHAAAFFLGYQISKF-SFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAV 372
Query: 182 XXXXXXXFMALGGSALAVLWRNRPIPLDDKDDFKE 286 MALGGSALAV WRN+PIP+DDKDDFKE Sbjct: 373 PSAVSVVCMALGGSALAVYWRNQPIPVDDKDDFKE 407
>tr|A9NUU8|A9NUU8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 423
Score = 139 bits (351), Expect = 6e-32 Identities = 71/95 (74%), Positives = 74/95 (77%) Frame = +2
Query: 2 LILPVAILHAAAFFLGYVMSKFCQFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXX 181 L+LPVAILHA AF LGY +SK+ FGESTSRTISIECGMQSSALGFLLAQKHFTN Sbjct: 329 LVLPVAILHAVAFSLGYWVSKWSSFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAV 388
Query: 182 XXXXXXXFMALGGSALAVLWRNRPIPLDDKDDFKE 286 FMALGGS LAV WRN PIP DDKDDFKE Sbjct: 389 PSAVSVVFMALGGSVLAVYWRNVPIPFDDKDDFKE 423
>tr|A7PEW7|A7PEW7_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016816001 PE=4 SV=1 Length = 417
Score = 137 bits (346), Expect = 2e-31 Identities = 73/95 (76%), Positives = 76/95 (80%) Frame = +2
Query: 2 LILPVAILHAAAFFLGYVMSKFCQFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXX 181 LILPVAILHAAAF LGY +SK FGESTSRTISIECGMQSSALGFLLAQKHFTN Sbjct: 324 LILPVAILHAAAFALGYWVSKI-SFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAV 382
Query: 182 XXXXXXXFMALGGSALAVLWRNRPIPLDDKDDFKE 286 MALGGSALAV WRN+PIP+DDKDDFKE Sbjct: 383 PSAVSVVCMALGGSALAVFWRNQPIPVDDKDDFKE 417
>tr|A5BFK8|A5BFK8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002026 PE=4 SV=1 Length = 433
Score = 137 bits (346), Expect = 2e-31 Identities = 73/95 (76%), Positives = 76/95 (80%) Frame = +2
Query: 2 LILPVAILHAAAFFLGYVMSKFCQFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXX 181 LILPVAILHAAAF LGY +SK FGESTSRTISIECGMQSSALGFLLAQKHFTN Sbjct: 340 LILPVAILHAAAFALGYWVSKI-SFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAV 398
Query: 182 XXXXXXXFMALGGSALAVLWRNRPIPLDDKDDFKE 286 MALGGSALAV WRN+PIP+DDKDDFKE Sbjct: 399 PSAVSVVCMALGGSALAVFWRNQPIPVDDKDDFKE 433
>tr|A9T925|A9T925_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_142102 PE=4 SV=1 Length = 360
Score = 135 bits (341), Expect = 9e-31 Identities = 70/95 (73%), Positives = 74/95 (77%) Frame = +2
Query: 2 LILPVAILHAAAFFLGYVMSKFCQFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXX 181 LILPVA+LH AAF LGY MSK +FGESTSRTISIECGMQSSALGFLLAQKHF+N Sbjct: 266 LILPVALLHLAAFALGYFMSKMFKFGESTSRTISIECGMQSSALGFLLAQKHFSNPLVAV 325
Query: 182 XXXXXXXFMALGGSALAVLWRNRPIPLDDKDDFKE 286 MALGGSALAV WRN+ IP DDKDDFKE Sbjct: 326 PSAVSVVAMALGGSALAVYWRNQAIPADDKDDFKE 360
>tr|Q8S2V7|Q8S2V7_ARATH Putative sodium-dependent bile acid symporter OS=Arabidopsis thaliana GN=Sbf1 PE=2 SV=1 Length = 409
Score = 135 bits (339), Expect = 1e-30 Identities = 71/95 (74%), Positives = 74/95 (77%) Frame = +2
Query: 2 LILPVAILHAAAFFLGYVMSKFCQFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXX 181 LILPVA+LHAAAF +GY +SKF FGESTSRTISIECGMQSSALGFLLAQKHFTN Sbjct: 316 LILPVALLHAAAFAIGYWISKF-SFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAV 374
Query: 182 XXXXXXXFMALGGSALAVLWRNRPIPLDDKDDFKE 286 MALGGS LAV WRN PIP DDKDDFKE Sbjct: 375 PSAVSVVCMALGGSGLAVFWRNLPIPADDKDDFKE 409
>tr|Q84WD8|Q84WD8_ARATH Putative Na+ dependent ileal bile acid transporter OS=Arabidopsis thaliana GN=At2g26900 PE=2 SV=1 Length = 271
Score = 135 bits (339), Expect = 1e-30 Identities = 71/95 (74%), Positives = 74/95 (77%) Frame = +2
Query: 2 LILPVAILHAAAFFLGYVMSKFCQFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXX 181 LILPVA+LHAAAF +GY +SKF FGESTSRTISIECGMQSSALGFLLAQKHFTN Sbjct: 178 LILPVALLHAAAFAIGYWISKF-SFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAV 236
Query: 182 XXXXXXXFMALGGSALAVLWRNRPIPLDDKDDFKE 286 MALGGS LAV WRN PIP DDKDDFKE Sbjct: 237 PSAVSVVCMALGGSGLAVFWRNLPIPADDKDDFKE 271
>tr|Q1EBV7|Q1EBV7_ARATH At2g26900 OS=Arabidopsis thaliana PE=2 SV=1 Length = 409
Score = 135 bits (339), Expect = 1e-30 Identities = 71/95 (74%), Positives = 74/95 (77%) Frame = +2
Query: 2 LILPVAILHAAAFFLGYVMSKFCQFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXX 181 LILPVA+LHAAAF +GY +SKF FGESTSRTISIECGMQSSALGFLLAQKHFTN Sbjct: 316 LILPVALLHAAAFAIGYWISKF-SFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAV 374
Query: 182 XXXXXXXFMALGGSALAVLWRNRPIPLDDKDDFKE 286 MALGGS LAV WRN PIP DDKDDFKE Sbjct: 375 PSAVSVVCMALGGSGLAVFWRNLPIPADDKDDFKE 409
>tr|A9PIN5|A9PIN5_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 420
Score = 135 bits (339), Expect = 1e-30 Identities = 69/95 (72%), Positives = 75/95 (78%) Frame = +2
Query: 2 LILPVAILHAAAFFLGYVMSKFCQFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXX 181 LI+PVA+LH AAF LGY +S+ FGESTSRTISIECGMQSSALGFLLAQKHFTN Sbjct: 327 LIMPVALLHVAAFALGYWLSRM-SFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAV 385
Query: 182 XXXXXXXFMALGGSALAVLWRNRPIPLDDKDDFKE 286 MALGGSALAV WRNRP+P+DDKDDFKE Sbjct: 386 PSAVSVVCMALGGSALAVFWRNRPVPVDDKDDFKE 420
>tr|Q5VRB2|Q5VRB2_ORYSJ cDNA clone:J023014F07, full insert sequence OS=Oryza sativa subsp. japonica GN=P0707D10.23-1 PE=2 SV=1 Length = 419
Score = 133 bits (335), Expect = 4e-30 Identities = 68/95 (71%), Positives = 73/95 (76%) Frame = +2
Query: 2 LILPVAILHAAAFFLGYVMSKFCQFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXX 181 LI+PVA+LH AAF LGY +SK FGESTSRTISIECGMQSSALGFLLAQKHFTN Sbjct: 325 LIIPVALLHVAAFALGYWLSKVSSFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAV 384
Query: 182 XXXXXXXFMALGGSALAVLWRNRPIPLDDKDDFKE 286 MALGGSALAV WRNR +P +DKDDFKE Sbjct: 385 PSAVSVVCMALGGSALAVFWRNRGLPANDKDDFKE 419
|