BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911680|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_H06.
         (416 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A9BFB9|NRDR_PETMO Transcriptional repressor nrdR OS=Petrotoga...    30   3.8  
sp|Q8BLK9|KS6C1_MOUSE Ribosomal protein S6 kinase delta-1 OS=Mus...    30   4.9  
sp|P12572|FUS_NDVA Fusion glycoprotein F0 OS=Newcastle disease v...    29   6.4  

>sp|A9BFB9|NRDR_PETMO Transcriptional repressor nrdR OS=Petrotoga
           mobilis (strain DSM 10674 / SJ95) GN=nrdR PE=3 SV=1
          Length = 150

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -2

Query: 205 ENSELEKVGVSKDDGLLEK*STPRWDNKELLNGKRQTIMSKVCSTDALEEHPHTLRDQVG 26
           E  E  ++ + K DG  E      +D K+L+NG  +    +  STD +EE    + +Q+ 
Sbjct: 42  ERYEQTRIRIIKKDGRREL-----YDRKKLMNGILKACEKRPVSTDQIEEIVDNIEEQLR 96

Query: 25  EQSN 14
              N
Sbjct: 97  RSGN 100


>sp|Q8BLK9|KS6C1_MOUSE Ribosomal protein S6 kinase delta-1 OS=Mus
           musculus GN=Rps6kc1 PE=1 SV=2
          Length = 1056

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = -2

Query: 313 GSVMEASHLEGARFGLGGEDSSLYKKQITSMDSSRSENSELEKVGVSKDDGLLE 152
           GSV  ++HL   R   GGED        TS   SRS+NS +E   +   D   E
Sbjct: 555 GSVSPSTHL---RVFSGGEDLEAVSSPPTSESLSRSKNSPMEFFRIDSKDSTSE 605


>sp|P12572|FUS_NDVA Fusion glycoprotein F0 OS=Newcastle disease
           virus (strain Australia-Victoria/32) GN=F PE=3 SV=2
          Length = 553

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 22/76 (28%), Positives = 34/76 (44%)
 Frame = -2

Query: 289 LEGARFGLGGEDSSLYKKQITSMDSSRSENSELEKVGVSKDDGLLEK*STPRWDNKELLN 110
           L+G    L GE  + Y+K I+ +DS       L+   +S + G +    +   D  E  N
Sbjct: 429 LDGITLRLSGEFDATYQKNISILDSQVIVTGNLD---ISTELGNVNNSISNALDKLEESN 485

Query: 109 GKRQTIMSKVCSTDAL 62
            K   +  K+ ST AL
Sbjct: 486 SKLDKVNVKLTSTSAL 501

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911680|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_H06.
         (416 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9DQB4|A9DQB4_9FLAO Putative cell wall-associated protein OS=...    34   3.2  
tr|A7NMN0|A7NMN0_ROSCS Adenylate/guanylate cyclase with TPR repe...    34   4.1  
tr|Q30T63|Q30T63_SULDN Putative uncharacterized protein OS=Sulfu...    33   9.2  

>tr|A9DQB4|A9DQB4_9FLAO Putative cell wall-associated protein
           OS=Kordia algicida OT-1 GN=KAOT1_15683 PE=4 SV=1
          Length = 1840

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = -2

Query: 226 SMDSSRS--ENSELEKVGVSKDDGLLEK*STPRWDNKELL 113
           S DSS S  ENS+  KVG++++  +LEK S+  W N  LL
Sbjct: 755 SWDSSGSLQENSDTTKVGITQNGNILEKTSSTSWTNAGLL 794


>tr|A7NMN0|A7NMN0_ROSCS Adenylate/guanylate cyclase with TPR repeats
           OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8)
           GN=Rcas_2730 PE=4 SV=1
          Length = 1429

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 23/71 (32%), Positives = 33/71 (46%)
 Frame = -3

Query: 339 LKYTTRATKGVSWKHHIWKVRDLD*EGKIAHYIKNRLRRWTLREARTQSWRKLG*ARTTG 160
           L++T+      + +HH+  VR +     IA Y+  R+ RW LRE R   W +       G
Sbjct: 36  LRHTSGVVDIPAVRHHLAAVRTV-----IATYLPRRVARWALRERRAPPWLEW----VEG 86

Query: 159 SLRNDQLRGGT 127
           SL    L G T
Sbjct: 87  SLLFADLSGST 97


>tr|Q30T63|Q30T63_SULDN Putative uncharacterized protein
           OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM
           1251) GN=Suden_0539 PE=4 SV=1
          Length = 359

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = -3

Query: 408 VKKLHS*VAQRMVNLRILLVKSPLKYTTRATKGVSWKHHIWKVRDLD*EGKIAHYIKNRL 229
           +KK +   +  +V LR+ L+++P          + W+HHI  +  +D  G+  +YI   L
Sbjct: 86  MKKFYEFYSIDLVQLRVGLIENPQNQLEDILFSIPWRHHIEILNKVDSIGEAVYYIDQTL 145

Query: 228 R 226
           +
Sbjct: 146 Q 146