BP911686 |
Clone id |
YMU001_000008_A02 |
Library |
YMU01 |
Length |
437 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000008_A02. |
Accession |
BP911686 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCACGAGTGGTGGATATTCTTTTCATCCTTCATGCCGAACATGAGATGAACTGTTCTACT GCTGCTGCACGCCATCTGTCATCCAGTGGAGTTGATGTCTACACAGCCGTTGCCGGAGCG GCCGGGGCACTGTATGGACCATTACATGGTGGTGCCAATGAGGCAGTCTTAAAGATGTTA AGCGAGATCGGTAGTGTCGACAATATTCCGGAGTTTCTAGAAGGCGTAAAGAATAGGAAG AGGAAGATGTCCGGGTTTGGCCATCGGGTGTACAAAAATTACGATCCTCGAGCCAAAGTT ATCAAGAAGCTTGCTGAGGAGGTGTTTTCCATAGTTGGACGTGATCCTTTGATTGAGGTA GCAGTTGCTTTAGAGGCAGCAGCTCTCTCCGATGAGTATTTTGTCAAGAGGCAACTTTAT CCTAATGTGGACTTCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SJH7 |
Definition |
sp|Q9SJH7|CISY3_ARATH Citrate synthase 3, peroxisomal OS=Arabidopsis thaliana |
Align length |
145 |
Score (bit) |
250.0 |
E-value |
2.0e-66 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911686|Adiantum capillus-veneris mRNA, clone: YMU001_000008_A02. (437 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SJH7|CISY3_ARATH Citrate synthase 3, peroxisomal OS=Arabido... 250 2e-66 sp|P49299|CYSZ_CUCMA Citrate synthase, glyoxysomal OS=Cucurbita ... 249 5e-66 sp|Q9LXS6|CISY2_ARATH Citrate synthase 2, peroxisomal OS=Arabido... 248 6e-66 sp|Q9LXS7|CISY1_ARATH Citrate synthase 1, peroxisomal OS=Arabido... 229 5e-60 sp|Q8MQU6|CISYP_DICDI Citrate synthase, peroxisomal OS=Dictyoste... 202 5e-52 sp|Q86AV6|CISYC_DICDI Citrate synthase OS=Dictyostelium discoide... 190 2e-48 sp|P20902|CISY_ACIAN Citrate synthase OS=Acinetobacter calcoacet... 160 2e-39 sp|Q10530|CISY1_MYCTU Citrate synthase 1 OS=Mycobacterium tuberc... 152 8e-37 sp|O33915|CISY_RHIME Citrate synthase OS=Rhizobium meliloti GN=g... 151 1e-36 sp|P94325|CISY_BRAJA Citrate synthase OS=Bradyrhizobium japonicu... 151 1e-36 sp|P51037|CISY1_RHITR Citrate synthase, chromosomal OS=Rhizobium... 151 1e-36 sp|Q59198|CISY_BARDO Citrate synthase (Fragment) OS=Bartonella d... 150 2e-36 sp|P51032|CISY_BAREL Citrate synthase (Fragment) OS=Bartonella e... 150 2e-36 sp|P51038|CISY2_RHITR Citrate synthase, plasmid OS=Rhizobium tro... 149 5e-36 sp|P14165|CISY_PSEAE Citrate synthase OS=Pseudomonas aeruginosa ... 149 6e-36 sp|P51031|CISY_BARBA Citrate synthase (Fragment) OS=Bartonella b... 149 6e-36 sp|P51036|CISY_BARVI Citrate synthase (Fragment) OS=Bartonella v... 148 8e-36 sp|P20901|CISY_ACEAC Citrate synthase OS=Acetobacter aceti GN=aa... 147 2e-35 sp|Q59258|CISY_BARTA Citrate synthase (Fragment) OS=Bartonella t... 146 3e-35 sp|P51033|CISY_BARHE Citrate synthase OS=Bartonella henselae GN=... 146 3e-35 sp|P51034|CISY_BARQU Citrate synthase OS=Bartonella quintana GN=... 145 7e-35 sp|Q1RGV8|CISY_RICBR Citrate synthase OS=Rickettsia bellii (stra... 144 2e-34 sp|Q59734|CISY_RICBE Citrate synthase (Fragment) OS=Rickettsia b... 144 2e-34 sp|Q59730|CISY_RICAK Citrate synthase (Fragment) OS=Rickettsia a... 142 6e-34 sp|P42457|CISY_CORGL Citrate synthase OS=Corynebacterium glutami... 142 8e-34 sp|P51040|CISY_RICFE Citrate synthase OS=Rickettsia felis GN=glt... 141 1e-33 sp|Q59741|CISY_RICHE Citrate synthase (Fragment) OS=Rickettsia h... 140 2e-33 sp|P51039|CISY_RICAU Citrate synthase (Fragment) OS=Rickettsia a... 140 2e-33 sp|O68883|CISY_SALTY Citrate synthase OS=Salmonella typhimurium ... 140 2e-33 sp|P51041|CISY_RICCA Citrate synthase (Fragment) OS=Rickettsia c... 140 2e-33
>sp|Q9SJH7|CISY3_ARATH Citrate synthase 3, peroxisomal OS=Arabidopsis thaliana GN=CSY3 PE=1 SV=1 Length = 509
Score = 250 bits (638), Expect = 2e-66 Identities = 123/145 (84%), Positives = 132/145 (91%) Frame = +1
Query: 1 ARVVDILFILHAEHEMNCSTAAARHLSSSGVDVYTAVAGAAGALYGPLHGGANEAVLKML 180 ARV+DILFILHAEHEMNCSTAAARHL+SSGVDVYTAVAGA GALYGPLHGGANEAVLKML Sbjct: 271 ARVLDILFILHAEHEMNCSTAAARHLASSGVDVYTAVAGAVGALYGPLHGGANEAVLKML 330
Query: 181 SEIGSVDNIPEFLEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVGRDPLIXX 360 SEIG+V+NIPEF+EGVKNRKRKMSGFGHRVYKNYDPRAKVIK LA+EVFSIVG+DPLI Sbjct: 331 SEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKNLADEVFSIVGKDPLIEV 390
Query: 361 XXXXXXXXXSDEYFVKRQLYPNVDF 435 SD+YFVKR+LYPNVDF Sbjct: 391 AVALEKAALSDDYFVKRKLYPNVDF 415
>sp|P49299|CYSZ_CUCMA Citrate synthase, glyoxysomal OS=Cucurbita maxima PE=1 SV=1 Length = 516
Score = 249 bits (635), Expect = 5e-66 Identities = 122/145 (84%), Positives = 133/145 (91%) Frame = +1
Query: 1 ARVVDILFILHAEHEMNCSTAAARHLSSSGVDVYTAVAGAAGALYGPLHGGANEAVLKML 180 ARV+DILFILHAEHEMNCST+AARHL+SSGVDV+TA++GA GALYGPLHGGANEAVLKML Sbjct: 281 ARVLDILFILHAEHEMNCSTSAARHLASSGVDVFTALSGAVGALYGPLHGGANEAVLKML 340
Query: 181 SEIGSVDNIPEFLEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVGRDPLIXX 360 SEIG+V+NIPEF+EGVKNRKRKMSGFGHRVYKNYDPRAKVI+KLAEEVFSIVGRDPLI Sbjct: 341 SEIGTVNNIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEV 400
Query: 361 XXXXXXXXXSDEYFVKRQLYPNVDF 435 SDEYFVKR+LYPNVDF Sbjct: 401 AVALEKAALSDEYFVKRKLYPNVDF 425
>sp|Q9LXS6|CISY2_ARATH Citrate synthase 2, peroxisomal OS=Arabidopsis thaliana GN=CSY2 PE=2 SV=1 Length = 514
Score = 248 bits (634), Expect = 6e-66 Identities = 122/145 (84%), Positives = 131/145 (90%) Frame = +1
Query: 1 ARVVDILFILHAEHEMNCSTAAARHLSSSGVDVYTAVAGAAGALYGPLHGGANEAVLKML 180 ARV+DILFILHAEHEMNCSTAAARHL+SSGVDVYTA AGA GALYGPLHGGANEAVLKML Sbjct: 276 ARVLDILFILHAEHEMNCSTAAARHLASSGVDVYTACAGAVGALYGPLHGGANEAVLKML 335
Query: 181 SEIGSVDNIPEFLEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVGRDPLIXX 360 +EIG+ +NIP+F+EGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLA+EVFSIVGRDPLI Sbjct: 336 AEIGTAENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLADEVFSIVGRDPLIEV 395
Query: 361 XXXXXXXXXSDEYFVKRQLYPNVDF 435 SDEYFVKR+LYPNVDF Sbjct: 396 AVALEKAALSDEYFVKRKLYPNVDF 420
>sp|Q9LXS7|CISY1_ARATH Citrate synthase 1, peroxisomal OS=Arabidopsis thaliana GN=CSY1 PE=2 SV=1 Length = 480
Score = 229 bits (583), Expect = 5e-60 Identities = 109/145 (75%), Positives = 125/145 (86%) Frame = +1
Query: 1 ARVVDILFILHAEHEMNCSTAAARHLSSSGVDVYTAVAGAAGALYGPLHGGANEAVLKML 180 ARV+DILFIL AEHEMNCSTAAARHLSSSG DVYTAV+G GA+YGPLHGGA EA + ML Sbjct: 273 ARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINML 332
Query: 181 SEIGSVDNIPEFLEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVGRDPLIXX 360 SEIG+V+NIPEF+E VKN+KR++SGFGHR+YKNYDPR KV+KKLA+EVFSI+GRDPL+ Sbjct: 333 SEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEV 392
Query: 361 XXXXXXXXXSDEYFVKRQLYPNVDF 435 SDEYFVKR+LYPNVDF Sbjct: 393 GDALEKAALSDEYFVKRKLYPNVDF 417
>sp|Q8MQU6|CISYP_DICDI Citrate synthase, peroxisomal OS=Dictyostelium discoideum GN=cshA PE=2 SV=1 Length = 492
Score = 202 bits (514), Expect = 5e-52 Identities = 94/144 (65%), Positives = 116/144 (80%) Frame = +1
Query: 4 RVVDILFILHAEHEMNCSTAAARHLSSSGVDVYTAVAGAAGALYGPLHGGANEAVLKMLS 183 R ++ILFILHA+HE+NCSTAA RH+SSSG D YT+VAGAAGALYGP HGGANEAVL ML Sbjct: 260 RALEILFILHADHELNCSTAAMRHISSSGTDPYTSVAGAAGALYGPSHGGANEAVLDMLI 319
Query: 184 EIGSVDNIPEFLEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVGRDPLIXXX 363 IGS +NIP+F+ VK++K+K+ GFGHR+YKNYDPRAK+I+++A EVF +G++PLI Sbjct: 320 HIGSKENIPQFISDVKSKKKKLMGFGHRIYKNYDPRAKIIRRVAYEVFESLGKEPLIEVA 379
Query: 364 XXXXXXXXSDEYFVKRQLYPNVDF 435 DEYFV R+LYPNVDF Sbjct: 380 TELEKQALEDEYFVSRKLYPNVDF 403
>sp|Q86AV6|CISYC_DICDI Citrate synthase OS=Dictyostelium discoideum GN=gltA PE=3 SV=1 Length = 512
Score = 190 bits (483), Expect = 2e-48 Identities = 85/144 (59%), Positives = 116/144 (80%) Frame = +1
Query: 4 RVVDILFILHAEHEMNCSTAAARHLSSSGVDVYTAVAGAAGALYGPLHGGANEAVLKMLS 183 R +D LFI+HA+HE+NCSTA R ++S+ VD YTA AG+AGALYGPLHGGANEAVL+ML Sbjct: 241 RALDKLFIIHADHELNCSTATMRQIASTLVDPYTACAGSAGALYGPLHGGANEAVLRMLE 300
Query: 184 EIGSVDNIPEFLEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVGRDPLIXXX 363 IG+++NIP+F+E VK +K+++ GFGHRVYK+YDPRAK++K + E+F+++G++PL+ Sbjct: 301 AIGTIENIPKFIEQVKQKKQRLMGFGHRVYKSYDPRAKILKTVTMEIFALLGKNPLMQIA 360
Query: 364 XXXXXXXXSDEYFVKRQLYPNVDF 435 SD YF++RQLYPNVDF Sbjct: 361 TELERLALSDSYFIERQLYPNVDF 384
>sp|P20902|CISY_ACIAN Citrate synthase OS=Acinetobacter calcoaceticus subsp. anitratus GN=gltA PE=3 SV=2 Length = 424
Score = 160 bits (405), Expect = 2e-39 Identities = 77/146 (52%), Positives = 101/146 (69%), Gaps = 1/146 (0%) Frame = +1
Query: 1 ARVVDILFILHAEHEMNCSTAAARHLSSSGVDVYTAVAGAAGALYGPLHGGANEAVLKML 180 AR +D +F LHA+HE N ST+ R S+G + Y ++ AL+GP HGGANEAVLKML Sbjct: 220 ARAMDRIFTLHADHEQNASTSTVRLAGSTGANPYACISAGISALWGPAHGGANEAVLKML 279
Query: 181 SEIGSVDNIPEFLEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVG-RDPLIX 357 EIGSV+N+ EF+E VK ++ K+ GFGHRVYKN+DPRAKV+K+ +EV +G DP + Sbjct: 280 DEIGSVENVAEFMEKVKRKEVKLMGFGHRVYKNFDPRAKVMKQTCDEVLEALGINDPQLA 339
Query: 358 XXXXXXXXXXSDEYFVKRQLYPNVDF 435 +D YFV+R+LYPNVDF Sbjct: 340 LAMELERIALNDPYFVERKLYPNVDF 365
>sp|Q10530|CISY1_MYCTU Citrate synthase 1 OS=Mycobacterium tuberculosis GN=gltA2 PE=3 SV=1 Length = 431
Score = 152 bits (383), Expect = 8e-37 Identities = 74/148 (50%), Positives = 108/148 (72%), Gaps = 4/148 (2%) Frame = +1
Query: 4 RVVDILFILHAEHEMNCSTAAARHLSSSGVDVYTAVAGAAGALYGPLHGGANEAVLKMLS 183 R +D+LFILHA+HE NCST+ R + SS +++T+++G AL+GPLHGGAN+AVL+ML Sbjct: 220 RALDMLFILHADHEQNCSTSTVRLVGSSRANLFTSISGGINALWGPLHGGANQAVLEMLE 279
Query: 184 EI-GSVDNIPEFLEGVKNRKR--KMSGFGHRVYKNYDPRAKVIKKLAEEVFS-IVGRDPL 351 I S D++ EF+ VKNR+ K+ GFGHRVYKNYDPRA+++K+ A+++ + + G D L Sbjct: 280 GIRDSGDDVSEFVRKVKNREAGVKLMGFGHRVYKNYDPRARIVKEQADKILAKLGGDDSL 339
Query: 352 IXXXXXXXXXXXSDEYFVKRQLYPNVDF 435 + +D+YF++R+LYPNVDF Sbjct: 340 LGIAKELEEAALTDDYFIERKLYPNVDF 367
>sp|O33915|CISY_RHIME Citrate synthase OS=Rhizobium meliloti GN=gltA PE=3 SV=2 Length = 429
Score = 151 bits (382), Expect = 1e-36 Identities = 72/149 (48%), Positives = 100/149 (67%), Gaps = 4/149 (2%) Frame = +1
Query: 1 ARVVDILFILHAEHEMNCSTAAARHLSSSGVDVYTAVAGAAGALYGPLHGGANEAVLKML 180 AR +D +FILHA+HE N ST+ R SSG + + +A L+GP HGGANEA L ML Sbjct: 217 ARAMDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANEAALNML 276
Query: 181 SEIGSVDNIPEFLEGVKNRKR--KMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVGR--DP 348 +EIG+VD IPE++ K++ ++ GFGHRVYKNYDPRAK+++K EV + +G DP Sbjct: 277 AEIGTVDRIPEYITKAKDKNDPFRLMGFGHRVYKNYDPRAKIMQKTTHEVLAELGHKDDP 336
Query: 349 LIXXXXXXXXXXXSDEYFVKRQLYPNVDF 435 L+ +DEYF++++LYPN+DF Sbjct: 337 LLEVAMELERIALTDEYFIEKKLYPNIDF 365
>sp|P94325|CISY_BRAJA Citrate synthase OS=Bradyrhizobium japonicum GN=gltA PE=3 SV=2 Length = 434
Score = 151 bits (381), Expect = 1e-36 Identities = 75/149 (50%), Positives = 97/149 (65%), Gaps = 4/149 (2%) Frame = +1
Query: 1 ARVVDILFILHAEHEMNCSTAAARHLSSSGVDVYTAVAGAAGALYGPLHGGANEAVLKML 180 A +D +FILHA+HE N ST+ R SSG + + +A L+GP HGGANEA L ML Sbjct: 221 ADALDKIFILHADHEQNASTSTVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALAML 280
Query: 181 SEIGSVDNIPEFLEGV--KNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVFSIVGR--DP 348 +EIGSVD IPEF+ V KN + ++ GFGHRVYKNYDPRAK+++K+ V G DP Sbjct: 281 AEIGSVDKIPEFIAKVKDKNSEVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDP 340
Query: 349 LIXXXXXXXXXXXSDEYFVKRQLYPNVDF 435 ++ SD+YF+ R+LYPNVDF Sbjct: 341 MLKVAMELEKIALSDQYFIDRKLYPNVDF 369
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PJZ1 |
Definition |
tr|A7PJZ1|A7PJZ1_VITVI Citrate synthase OS=Vitis vinifera |
Align length |
145 |
Score (bit) |
254.0 |
E-value |
1.0e-66 |
Report |
|