BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911689|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_A06.
         (284 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B0SVL4|SECA_CAUSK Protein translocase subunit secA OS=Cauloba...    31   2.2  
sp|P38380|SECA_CAUCR Protein translocase subunit secA OS=Cauloba...    31   2.2  
sp|P95297|NIFE_METTM Nitrogenase iron-molybdenum cofactor biosyn...    30   3.7  
sp|O27607|NIFE_METTH Nitrogenase iron-molybdenum cofactor biosyn...    29   6.3  

>sp|B0SVL4|SECA_CAUSK Protein translocase subunit secA
           OS=Caulobacter sp. (strain K31) GN=secA PE=3 SV=1
          Length = 921

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
 Frame = -3

Query: 276 LQVLVKDVV-----FGADEKLKDCILEEDG*EFVPRKVEEVVAAG 157
           + VLVKD++     F  DEK K  IL E+G E    ++EE++ AG
Sbjct: 238 IDVLVKDLIKDKTNFDHDEKQKQVILTEEGQE----RIEEILMAG 278


>sp|P38380|SECA_CAUCR Protein translocase subunit secA
           OS=Caulobacter crescentus GN=secA PE=3 SV=2
          Length = 923

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
 Frame = -3

Query: 276 LQVLVKDVV-----FGADEKLKDCILEEDG*EFVPRKVEEVVAAG 157
           + VLVK+++     F  DEK K  IL EDG E    K+EE++ +G
Sbjct: 238 IDVLVKELILDKSMFDHDEKQKQVILTEDGQE----KIEEILMSG 278


>sp|P95297|NIFE_METTM Nitrogenase iron-molybdenum cofactor
           biosynthesis protein nifE OS=Methanobacterium
           thermoautotrophicum (strain Marburg / DSM 2133) GN=nifE
           PE=3 SV=1
          Length = 480

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -3

Query: 261 KDVVFGADEKLKDCILE 211
           KDVVFG ++KL +CILE
Sbjct: 121 KDVVFGGEDKLLECILE 137


>sp|O27607|NIFE_METTH Nitrogenase iron-molybdenum cofactor
           biosynthesis protein nifE OS=Methanobacterium
           thermoautotrophicum GN=nifE PE=3 SV=1
          Length = 478

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -3

Query: 261 KDVVFGADEKLKDCILEED 205
           KDVVFG +++L  CILE D
Sbjct: 118 KDVVFGGEDRLLKCILEVD 136

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911689|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_A06.
         (284 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9G861|Q9G861_9EUKA NADH-ubiquinone oxidoreductase chain 4 OS...    33   7.2  

>tr|Q9G861|Q9G861_9EUKA NADH-ubiquinone oxidoreductase chain 4
           OS=Malawimonas jakobiformis GN=nad4 PE=3 SV=1
          Length = 486

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 22/58 (37%), Positives = 30/58 (51%)
 Frame = +1

Query: 106 SIWWYVGVTFVQLNIRHTCGYYFFDFSWHEFSAIFFKYAILQLLISAKDNIFHEYLQV 279
           +IW Y  V F  +NI +     F D    EF AIF  + +L LL+    NIF +YL +
Sbjct: 422 AIWLYNRVAFGNININYINP--FNDLYLREF-AIFIPFVVLILLMGIYPNIFLDYLHL 476