BP911694
Clone id YMU001_000008_B01
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000008_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCAGGGCCAGGTAGGCTCTGAAGTCCAAAATGAGAGGTCTACTGTTGTAGGGACTAAAGA
TGCTATGGAGAAAGCCGAGGAAGCAATGGGGAATATTGTGTTGGCCAGTGGCCAAATGGA
TAAAGACAGGCTTTCTGGGAGAGCAAATCATGGAGGTACTTCTAGTTTTTGATAAAGAGC
TCCTAGTATGAGTCTGATTACTATTCGTGGTCTCTTAAGGAGCATTTACAGTTGTTTATT
TTCAATTGACATTTATTCACATCTCTCACTGATCTTCAATGATTCATTCATATTGCTTCT
TGCCACGGCTCACCAAAGACATTTATATGATTTGAGAAAAACCTTGTTGGAGGAATTCGT
ACCCTCCAGAACGAGAAAGTTGCATGTATCTAACGTGTGTATCAAGACTTGGTCCTCATT
GTGGACTGCTTTTGTGTACTACAATTCAAGCCCATTGTGTACCACATTGAACCAAGAGTT
TTTGTCTAGTTGGGATC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911694|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_B01.
(497 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q4S887
Definition tr|Q4S887|Q4S887_TETNG Chromosome 3 SCAF14707, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
Align length 104
Score (bit) 37.0
E-value 0.52
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911694|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_B01.
(497 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4S887|Q4S887_TETNG Chromosome 3 SCAF14707, whole genome shot... 37 0.52
tr|B8I4N4|B8I4N4_CLOCE Putative uncharacterized protein OS=Clost... 33 7.5
tr|Q7QIZ0|Q7QIZ0_ANOGA AGAP007137-PA (Fragment) OS=Anopheles gam... 33 7.5
tr|A7URQ4|A7URQ4_ANOGA AGAP007137-PB (Fragment) OS=Anopheles gam... 33 7.5
tr|A0DAM7|A0DAM7_PARTE Chromosome undetermined scaffold_43, whol... 33 7.5
tr|Q319D1|Q319D1_PROM9 RNA-binding S4 OS=Prochlorococcus marinus... 33 9.8
tr|A7ALI1|A7ALI1_9PORP Sensor protein OS=Parabacteroides merdae ... 33 9.8

>tr|Q4S887|Q4S887_TETNG Chromosome 3 SCAF14707, whole genome shotgun
sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00022461001 PE=4 SV=1
Length = 315

Score = 37.0 bits (84), Expect = 0.52
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Frame = +2

Query: 182 PSMSLITIRGLLRSIYSCLFSIDIYSHLSLIFNDSFILLLATAHQ----RHLYDLRKTLL 349
P +SL+ + GLL Y L ++ ++S + + + L H RH++ L TL+
Sbjct: 130 PPLSLLVLHGLLCKRYRVLSTVHVHSSVPSV-PPQLVSCLGPRHPDSYARHMFQLGFTLI 188

Query: 350 EEFVPSRTRKLHVSNVCIKTWSSLWTAFVY-----YNSSPLCTT 466
+ VP K ++ N+C + F+Y Y S P T
Sbjct: 189 WKDVPKVQMKFNIQNMCPIEGEASVARFLYKLLAPYPSDPAAAT 232


>tr|B8I4N4|B8I4N4_CLOCE Putative uncharacterized protein
OS=Clostridium cellulolyticum H10 GN=Ccel_2196 PE=4 SV=1
Length = 577

Score = 33.1 bits (74), Expect = 7.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2

Query: 2 QGQVGSEVQNERSTVVGTKDAMEKAEEAMGNIVLASGQMDKDRLSGRA 145
QG+V +Q + T+V +EK +++G+ + G M+ D + G+A
Sbjct: 204 QGRVSPTLQMKTGTLVNDDAELEKEADSVGSKAVVQGSMEADNIGGKA 251


>tr|Q7QIZ0|Q7QIZ0_ANOGA AGAP007137-PA (Fragment) OS=Anopheles
gambiae GN=AGAP007137 PE=4 SV=4
Length = 842

Score = 33.1 bits (74), Expect = 7.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2

Query: 8 QVGSEVQNERSTVVGTKDAMEKAEEAMGNIVLASGQMDKDRLSGRANHGGT 160
Q+GS V NE T +++ + A G + ASG+ L+GR GGT
Sbjct: 319 QLGSPVDNENQTFARR---LQQQQSASGAVPAASGKAQNTGLTGRTGRGGT 366


>tr|A7URQ4|A7URQ4_ANOGA AGAP007137-PB (Fragment) OS=Anopheles
gambiae GN=AGAP007137 PE=4 SV=1
Length = 680

Score = 33.1 bits (74), Expect = 7.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2

Query: 8 QVGSEVQNERSTVVGTKDAMEKAEEAMGNIVLASGQMDKDRLSGRANHGGT 160
Q+GS V NE T +++ + A G + ASG+ L+GR GGT
Sbjct: 315 QLGSPVDNENQTFARR---LQQQQSASGAVPAASGKAQNTGLTGRTGRGGT 362


>tr|A0DAM7|A0DAM7_PARTE Chromosome undetermined scaffold_43, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00015001001 PE=4 SV=1
Length = 431

Score = 33.1 bits (74), Expect = 7.5
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 14/87 (16%)
Frame = +2

Query: 227 YSCLFSIDIYSHLSL-----------IFNDSFILLLATAHQRHLYDLRKTLLEEFVPSRT 373
YSC ++D HL+L + D I LL T+H + D+ +L E + S+
Sbjct: 296 YSCQAALDFIYHLALKNNETTQSFAYLLYDDIIKLLRTSHSKRSIDICLKILSELIQSQI 355

Query: 374 RKLHV---SNVCIKTWSSLWTAFVYYN 445
K + + + + +T F Y N
Sbjct: 356 LKTEINVLNEIIFEIGEERYTYFDYQN 382


>tr|Q319D1|Q319D1_PROM9 RNA-binding S4 OS=Prochlorococcus marinus
(strain MIT 9312) GN=PMT9312_1454 PE=4 SV=1
Length = 263

Score = 32.7 bits (73), Expect = 9.8
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2

Query: 323 LYDLRKTLLEEFVPSRTRKL-HVSNVCIKTWSSLWTAFVYYNSSPLCTTLNQEF 481
+ DL++ L+ T +L +++N+ K W + WT F NS+ +C ++++F
Sbjct: 1 MIDLKEILINSNYKEETEELINIANLAYKHWETYWTGF---NSTYVCEEISKDF 51


>tr|A7ALI1|A7ALI1_9PORP Sensor protein OS=Parabacteroides merdae
ATCC 43184 GN=PARMER_04314 PE=4 SV=1
Length = 684

Score = 32.7 bits (73), Expect = 9.8
Identities = 18/80 (22%), Positives = 39/80 (48%)
Frame = +2

Query: 176 RAPSMSLITIRGLLRSIYSCLFSIDIYSHLSLIFNDSFILLLATAHQRHLYDLRKTLLEE 355
R L+ I L Y L + ++ +++I+ND + + + L+ LL+E
Sbjct: 35 RKEEKELVAIHRLAEKSYIGLLDLSTHAEIAVIWNDDDLREYSRKRRGVCDSLQ--LLKE 92

Query: 356 FVPSRTRKLHVSNVCIKTWS 415
+V + +K H+ ++C+ W+
Sbjct: 93 YVHTPLQKSHIDSLCLLLWN 112