BP911706 [AcEST]

BP911706
Clone id	YMU001_000008_C01
Library	YMU01
Length	513
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000008_C01.
Accession	BP911706
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	AATAGTTATAAATCTAAGTAGGATGTGGATTCACCCATTTCAGGAGTGGGGTGTGGAATT TTCCGATGACTGCTTTCCCAGCTCTATATACTGCCCATTTGCCATTTTTCTTTGCTTCTT TGACTTTGGCCAACTCTGCTAGCCTATTCTTAAGCTGCAGTGGGCTTAGTTCATCAGCTA TCCATACATTTGTCCCTTGGAGGGACCTTGTTTGCTTCATGACTGCTATTTTCTCAGATT TGCCCCAATATGAGACCTTTGCCTATTGTGTGTCTTTGACTATGATGAAAGTGGGTTCCC CTCAGGCCCCGAAAGGTAAGACTTTGCTCAGCTGTGCTTAAAGAACATCTGTTTCTAATA CATAATCATCTTCAACATCTGGGGCAATGTTTTCCCTATCCCAACCTAAGGGAAGCCCAC CTATTCTAACTTGATTCTGTATGCCCTCGACCCTTTCCATTTCATTGATTACTCACATGA CCTCTTTAGCAAAATGTGCTGAGTTTGATAAAT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q3J729
Definition	sp\|Q3J729\|CH60_NITOC 60 kDa chaperonin OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Align length	71
Score (bit)	29.6
E-value	8.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP911706\|Adiantum capillus-veneris mRNA, clone: YMU001_000008_C01. (513 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q3J729\|CH60_NITOC 60 kDa chaperonin OS=Nitrosococcus oceani (... 30 8.5 >sp\|Q3J729\|CH60_NITOC 60 kDa chaperonin OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=groL PE=3 SV=1 Length = 554 Score = 29.6 bits (65), Expect = 8.5 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Frame = -3 Query: 466 NEMERVEGIQNQVRIGGLPLGWDRENIAPDVEDDYVLETDVLAQLSKVLP----FGAG 299 NE+E VEG+Q D++++A D++D Y+L D + + +LP G Sbjct: 185 NELEVVEGMQFDRGYLSPYFITDQQSMAADLDDPYILIHDKKISNIRDLLPVLESVAKAG 244 Query: 298 EPTFIIVKDTQ 266 +P +I +D + Sbjct: 245 KPLLVISEDVE 255
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP911706\|Adiantum capillus-veneris mRNA, clone: YMU001_000008_C01. (513 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****