BP911708
Clone id YMU001_000008_C03
Library
Length 554
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000008_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TATTACCTGCAGGTACTCCGGAGGGGTCATCTGCAGCGGCAAGTATTGTTTTATGAGGCT
CTTTCTAGGTATGGATGACAGTGGTATACCTGACGAGAGTAGAGCTTGCAAGCTTTTTAG
GGTCTGGCATAGTCTGATGATGATGACATCCTCTCCAGAATGCAGCCTGTACCGCTCTGC
TCATGCATCCGGGAGGAGATTGGTTGTTTTGATGACAATAGTCACGAGAACCTTCTCTGA
GCATGATGATGCTGTTGTTGGTAATGTAGTTTTGGATGAGTGATAGATCCTCCGCTGAAT
TGAGGCCAGTGGGAATATGAAGTTCATGAAATTGCCCATCCCTCTGTGTAAAAGAGCACA
CCATTTTTGAAGTATACAGCTTTTCAACCCCAAGCATACGATATGGTATTTGCGTGGGTG
GTAAAGCATTATTTTTGATGGTCACGCTTAGCAGCGTGCTGTAAACCTATGGAGTCTAGT
TCATCAATGTCATCTGCAGGCCAACCTTACATATTAAATGTTGTGGCTGGCTTTGTCAAT
GTATATTTCACCCA
■■Homology search results ■■ -
sp_hit_id Q57813
Definition sp|Q57813|Y367_METJA Probable integrase/recombinase protein MJ0367 OS=Methanocaldococcus jannaschii
Align length 51
Score (bit) 30.0
E-value 7.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911708|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_C03.
(554 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q57813|Y367_METJA Probable integrase/recombinase protein MJ03... 30 7.9
sp|A0RQM8|PANC_CAMFF Pantothenate synthetase OS=Campylobacter fe... 30 7.9

>sp|Q57813|Y367_METJA Probable integrase/recombinase protein MJ0367
OS=Methanocaldococcus jannaschii GN=MJ0367 PE=3 SV=1
Length = 330

Score = 30.0 bits (66), Expect = 7.9
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = -2

Query: 352 FTQRDGQFHELHIPTGLNSAEDLSLIQNYITNNSIIMLREGSRDYCHQNNQ 200
F R+ + HE T + S++ L L++NY+ N +R+GS DY QN+Q
Sbjct: 196 FKIRNTKTHEER--TVVCSSDTLELLRNYVQFN----VRQGSDDYLFQNSQ 240


>sp|A0RQM8|PANC_CAMFF Pantothenate synthetase OS=Campylobacter fetus
subsp. fetus (strain 82-40) GN=panC PE=3 SV=1
Length = 273

Score = 30.0 bits (66), Expect = 7.9
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3

Query: 282 HSSKTTLPTTASSCSEKVLVTIVIKTTNLLPDA*AERYRLHSGEDVIIIRLC 127
H+ TL + S ++ +V++ + T LP E+Y + D+ I LC
Sbjct: 31 HNGHATLIKNSVSQNDDTIVSVFVNPTQFLPGEDLEKYPRNQSGDIKICELC 82


tr_hit_id Q1D2N1
Definition tr|Q1D2N1|Q1D2N1_MYXXD Putative uncharacterized protein OS=Myxococcus xanthus (strain DK 1622)
Align length 63
Score (bit) 33.5
E-value 7.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911708|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_C03.
(554 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1D2N1|Q1D2N1_MYXXD Putative uncharacterized protein OS=Myxoc... 33 7.8
tr|B1VHP5|B1VHP5_CORU7 Putative molybdopterin biosynthesis prote... 33 7.8
tr|A2E4J7|A2E4J7_TRIVA PIKK family atypical protein kinase OS=Tr... 33 7.8

>tr|Q1D2N1|Q1D2N1_MYXXD Putative uncharacterized protein
OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_4936 PE=4
SV=1
Length = 394

Score = 33.5 bits (75), Expect = 7.8
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -2

Query: 277 IQNYITNNSIIMLREGSRDYCHQNNQSPPGCMSRAVQAAFWRGCHHHQTMPDPKKLASST 98
I IT + +L++G+R H + P M R V HH P P ++AS T
Sbjct: 100 IMGTITRVTTTLLKQGARGVSHSGSHGAPTRMPRQV-------AHHSTKAPSPSQIASET 152

Query: 97 LVR 89
R
Sbjct: 153 RAR 155


>tr|B1VHP5|B1VHP5_CORU7 Putative molybdopterin biosynthesis protein
OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM
7109) GN=moaE PE=4 SV=1
Length = 388

Score = 33.5 bits (75), Expect = 7.8
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -2

Query: 151 GCHHHQTMPDPKKLASSTLVRYTTVIHT--*KEPHKTILAAADDPSGVPA 8
GC H +PDP +A T V V+HT +EP +++L++A D + PA
Sbjct: 229 GCCHRPAVPDPPHVAEQTGV----VVHTRITEEPLESLLSSAKDVTATPA 274


>tr|A2E4J7|A2E4J7_TRIVA PIKK family atypical protein kinase
OS=Trichomonas vaginalis G3 GN=TVAG_445310 PE=4 SV=1
Length = 2063

Score = 33.5 bits (75), Expect = 7.8
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 12/59 (20%)
Frame = -3

Query: 381 SCILQKW-----------CALLHRGMGN-FMNFIFPLASIQRRIYHSSKTTLPTTASSC 241
+CI ++W A + G+GN F+ F++PL S RR SS +T P A+SC
Sbjct: 762 NCIYEQWEAPDLNYFIDVIASIVTGLGNDFLPFLYPLVSKIRRSISSSVSTNPYLANSC 820