BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911709|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_C04.
         (478 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q14190|SIM2_HUMAN Single-minded homolog 2 OS=Homo sapiens GN=...    30   5.5  
sp|Q9HC10|OTOF_HUMAN Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3       29   9.6  
sp|Q07427|K1C18_CARAU Keratin, type I cytoskeletal 18 OS=Carassi...    29   9.6  

>sp|Q14190|SIM2_HUMAN Single-minded homolog 2 OS=Homo sapiens
           GN=SIM2 PE=1 SV=2
          Length = 667

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 48  EAHRFYLNNLPLKGECDDKWHY 113
           E  RF+L+ LP  GEC  +WHY
Sbjct: 474 EVARFFLSTLPASGEC--QWHY 493


>sp|Q9HC10|OTOF_HUMAN Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3
          Length = 1997

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 378 SLCVETLYSSCSGSVCSWDFSRAMTDTSM 292
           SLCVE  Y +  G+V SWD    + D S+
Sbjct: 111 SLCVEVRYQATDGTVGSWDDGDFLGDESL 139


>sp|Q07427|K1C18_CARAU Keratin, type I cytoskeletal 18 OS=Carassius
           auratus GN=krt18 PE=2 SV=1
          Length = 435

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +1

Query: 256 SKYPIMTCSTMHHASVSHRTTEIPTANASTTTTI*GFDTKRSYMSLVGLMKNA*SLPTYP 435
           S+ P+   S M   S+  RTT +PT  A+ +T   G  T+ S  S  G +++   LP+  
Sbjct: 14  SQVPVSQMSQMSQMSIK-RTTNVPTYRAARSTAAAGQGTRISSASYSG-VRSGVGLPSMS 71

Query: 436 WQLH 447
             +H
Sbjct: 72  SSIH 75

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911709|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_C04.
         (478 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******