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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911716
Clone id YMU001_000008_C12
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000008_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GAGGAAGCTTGGGAAGAGGAACGGATCTCATTTTTCAAAGCAGGGAGGGGTGAAAGATGC
AGATAATGGTATAGAAATTGAAGCTGTTGCTGATTTGGGCATGGAAAAAGCTGTTGAGAG
GGGCAGCATTACCATTGGAAAAGTTTTTCCAGGGGCTCAAGGTATAGCACAACCTATCAA
AATGCATGCATCCGTAATACAAACCCTACCAAGATGGGACCCTCTTGAAAGTATAGGCGA
CAGAAGAGAGATGGGTATTGTTAAAAGAGACAAGTCCAGACAGAAGAGCCCAATATTTCC
AGCAATGAAGTGGGATCATCTGCTTGGAGTGGTCCGGCAGATAGGTAAATTTCAAAGCTC
ATCGAATCTGCTGCTATCCAGACAAACGAGGTTGCACTTCAAATTTCCACACCTCAATGT
TTCTTTAGACAATGTACATGGTTTTGGCTCAGATGATGAGCCTTTACATCAGTATGTCAT
CAATAACCTCGAAAAAATTGCAAGTATTGATGATGCATT
■■Homology search results ■■ -
sp_hit_id Q92831
Definition sp|Q92831|PCAF_HUMAN Histone acetyltransferase PCAF OS=Homo sapiens
Align length 87
Score (bit) 34.3
E-value 0.36
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911716|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_C12.
         (519 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q92831|PCAF_HUMAN Histone acetyltransferase PCAF OS=Homo sapi...    34   0.36 
sp|Q9JHD1|PCAF_MOUSE Histone acetyltransferase PCAF OS=Mus muscu...    32   1.8  
sp|Q2XU92|ACBG2_MOUSE Long-chain-fatty-acid--CoA ligase ACSBG2 O...    32   1.8  
sp|P0C8Q4|Y4990_ARATH Uncharacterized protein At4g19900 OS=Arabi...    30   5.2  
sp|P13686|PPA5_HUMAN Tartrate-resistant acid phosphatase type 5 ...    30   6.8  
sp|A1L1K7|ACBG2_RAT Long-chain-fatty-acid--CoA ligase ACSBG2 OS=...    30   6.8  
sp|O95150|TNF15_HUMAN Tumor necrosis factor ligand superfamily m...    30   8.8  

>sp|Q92831|PCAF_HUMAN Histone acetyltransferase PCAF OS=Homo sapiens
           GN=PCAF PE=1 SV=3
          Length = 832

 Score = 34.3 bits (77), Expect = 0.36
 Identities = 24/87 (27%), Positives = 37/87 (42%)
 Frame = +2

Query: 101 MEKAVERGSITIGKVFPGAQGIAQPIKMHASVIQTLPRWDPLESIGDRREMGIVKRDKSR 280
           ++K +ER    I KV+PG       +           R  P+ESI   RE G     K +
Sbjct: 670 IKKLIERKQAQIRKVYPGLSCFKDGV-----------RQIPIESIPGIRETGWKPSGKEK 718

Query: 281 QKSPIFPAMKWDHLLGVVRQIGKFQSS 361
            K P  P   +  L  +++Q+   QS+
Sbjct: 719 SKEPRDPDQLYSTLKSILQQVKSHQSA 745


>sp|Q9JHD1|PCAF_MOUSE Histone acetyltransferase PCAF OS=Mus musculus
           GN=Pcaf PE=1 SV=2
          Length = 813

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 22/81 (27%), Positives = 34/81 (41%)
 Frame = +2

Query: 101 MEKAVERGSITIGKVFPGAQGIAQPIKMHASVIQTLPRWDPLESIGDRREMGIVKRDKSR 280
           ++K +ER    I KV+PG       +           R  P+ESI   RE G     K +
Sbjct: 651 IKKLIERKQAQIRKVYPGLSCFKDGV-----------RQIPIESIPGIRETGWKPSGKEK 699

Query: 281 QKSPIFPAMKWDHLLGVVRQI 343
            K P  P   +  L  +++Q+
Sbjct: 700 SKEPKDPEQLYSTLKNILQQV 720


>sp|Q2XU92|ACBG2_MOUSE Long-chain-fatty-acid--CoA ligase ACSBG2
           OS=Mus musculus GN=Acsbg2 PE=1 SV=1
          Length = 667

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
 Frame = +2

Query: 167 AQPIKMHASVIQTLPRWDPLESIGDRR----EMGIVKRDKSRQKSPIFPAMKWDHLLGVV 334
           AQP  +  +++ TL    P   +G  R        +K + +R       A  W  +LG+ 
Sbjct: 296 AQPDALRGTLVYTLQEVKPTLFMGVPRIWEKMQDTIKENVARSSRLRKKAFAWAKMLGLK 355

Query: 335 ----RQIGKFQSSSNLLLSRQTRLHFKFPHLNVSLDNVHGFGSDDEPLHQYV 478
               R +GK     N  +++   L F     ++ LDN H F S   PL Q V
Sbjct: 356 VNTKRMLGKRDIPMNYRMAKA--LVFAKVRTSLGLDNCHAFFSSASPLSQDV 405


>sp|P0C8Q4|Y4990_ARATH Uncharacterized protein At4g19900
           OS=Arabidopsis thaliana GN=At4g19900 PE=2 SV=1
          Length = 644

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
 Frame = +2

Query: 269 DKSRQKSPIFPAMKWDHLLGVVRQIGKFQSSSNLLLSRQTRLHFKFPHLNVSLDNVHG-- 442
           D +R K+       +DH+ GV+R+            ++++   + + +   S+D+     
Sbjct: 115 DLNRNKAASSSGFYFDHVNGVIRRA----------FNKRSIDEWDYDYTGFSIDSDSSGD 164

Query: 443 ------FGSDDEPLHQYVINNLEKIASIDDA 517
                 FGSDD PL + +   + ++ S++DA
Sbjct: 165 KSSRAAFGSDDVPLDESIRRKIVEVTSVEDA 195


>sp|P13686|PPA5_HUMAN Tartrate-resistant acid phosphatase type 5
           OS=Homo sapiens GN=ACP5 PE=1 SV=3
          Length = 325

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
 Frame = +2

Query: 269 DKSRQKSPIFP-AMKWDHLLGVVRQIGKFQSSSNLLL-SRQTRLHFKFPHLNVS-----L 427
           D+S +K P +  A   DHL  V  QI   + S      S   RLHFK P  NVS     L
Sbjct: 96  DRSLRKVPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFML 155

Query: 428 DNVHGFGSDDEPLHQ 472
           D V   G+ D+ L Q
Sbjct: 156 DTVTLCGNSDDFLSQ 170


>sp|A1L1K7|ACBG2_RAT Long-chain-fatty-acid--CoA ligase ACSBG2
           OS=Rattus norvegicus GN=Acsbg2 PE=2 SV=1
          Length = 667

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
 Frame = +2

Query: 167 AQPIKMHASVIQTLPRWDPLESIGDRRE----MGIVKRDKSRQKSPIFPAMKWDHLLGVV 334
           AQP  +  +++ TL    P   +G  R        +K + ++  +    A  W  +LG+ 
Sbjct: 296 AQPDALRGTLVYTLQEVKPTYFLGVPRVWEKMQDTIKENVAKSSNLRKKAFAWAKMLGLK 355

Query: 335 ----RQIGKFQSSSNLLLSRQTRLHFKFPHLNVSLDNVHGFGSDDEPLHQYV 478
               + +GK     N  +++   L F     ++ LDN H F S   PL Q V
Sbjct: 356 VNTKKMLGKRDIPMNYRMAKA--LVFTKVRTSLGLDNCHTFFSGASPLSQDV 405


>sp|O95150|TNF15_HUMAN Tumor necrosis factor ligand superfamily
           member 15 OS=Homo sapiens GN=TNFSF15 PE=1 SV=2
          Length = 251

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +2

Query: 221 PLESIGD--RREMGIVKRDKSRQKSPIFPAMKWDHLLGVVRQIGKFQSSSNLLLSRQTRL 394
           PL + GD  R  + +V++  ++     FPA+ W+H LG+     +   ++  LL  ++  
Sbjct: 87  PLRADGDKPRAHLTVVRQTPTQHFKNQFPALHWEHELGLAFTKNRMNYTNKFLLIPESGD 146

Query: 395 HF 400
           +F
Sbjct: 147 YF 148
tr_hit_id A2DDE8
Definition tr|A2DDE8|A2DDE8_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3
Align length 80
Score (bit) 36.2
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911716|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_C12.
         (519 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2DDE8|A2DDE8_TRIVA Putative uncharacterized protein OS=Trich...    36   1.0  
tr|A1R9J8|A1R9J8_ARTAT Putative lipoprotein OS=Arthrobacter aure...    36   1.3  
tr|Q4P6A3|Q4P6A3_USTMA Putative uncharacterized protein OS=Ustil...    35   2.2  
tr|Q90ZI1|Q90ZI1_CHICK PCAF (Fragment) OS=Gallus gallus GN=pcaf ...    34   3.8  

>tr|A2DDE8|A2DDE8_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_013940 PE=4 SV=1
          Length = 1124

 Score = 36.2 bits (82), Expect = 1.0
 Identities = 22/80 (27%), Positives = 43/80 (53%)
 Frame = +2

Query: 227 ESIGDRREMGIVKRDKSRQKSPIFPAMKWDHLLGVVRQIGKFQSSSNLLLSRQTRLHFKF 406
           E + D+ E+  +KR    Q+S + P+++ D + G++R+    +     LL   TR+H + 
Sbjct: 162 EKLHDQAEINDLKRALKEQESDV-PSIQIDQMDGILRENSVLKQKIKELLEENTRVHKEN 220

Query: 407 PHLNVSLDNVHGFGSDDEPL 466
             L  +LDN+  F  ++E +
Sbjct: 221 LELKENLDNIK-FSDNNEKI 239


>tr|A1R9J8|A1R9J8_ARTAT Putative lipoprotein OS=Arthrobacter
           aurescens (strain TC1) GN=AAur_3213 PE=4 SV=1
          Length = 256

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
 Frame = -1

Query: 222 GSHLGRVCITDACILIGCA---IP*APGKTFPMVMLPLSTAFSMPKSATASISIPLSASF 52
           G+ +G +C+  A +L  C     P A   T   ++ P +TA + PKSAT   S+P SA++
Sbjct: 12  GTKVGGICLAVAALLTSCTPGPAPSAQESTKAALVAPSTTATTEPKSATTKPSVP-SATY 70

Query: 51  TPPCFEK*DPFLFPS 7
           +   ++    F +P+
Sbjct: 71  SGVAWDVAFSFDYPA 85


>tr|Q4P6A3|Q4P6A3_USTMA Putative uncharacterized protein OS=Ustilago
            maydis GN=UM04360.1 PE=4 SV=1
          Length = 1067

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
 Frame = +2

Query: 107  KAVERGSITIGKVFP---GAQGIAQPIKMHASVIQTLPRWDPLESIGDRREMGIV---KR 268
            K VE  S+ +  +FP    A    +P         TL  WD +  + + R + ++    +
Sbjct: 707  KRVEMPSVPVSTLFPQMDSASTSFEPSYDEVKAAATLALWDSITKLTEARAVAVMAKGSK 766

Query: 269  DKSRQKSPIFPAMKWD----HLLGV-VRQIGKFQSSSNLLLSRQTRLHFKFP 409
             KS++  P+  A  W+    H++ V +    KF+  +   L R   LH K P
Sbjct: 767  SKSKEMVPVMAACMWENSITHVVAVDIPLAAKFKKGATPAL-RPEGLHRKIP 817


>tr|Q90ZI1|Q90ZI1_CHICK PCAF (Fragment) OS=Gallus gallus GN=pcaf
           PE=2 SV=1
          Length = 760

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 25/87 (28%), Positives = 37/87 (42%)
 Frame = +2

Query: 101 MEKAVERGSITIGKVFPGAQGIAQPIKMHASVIQTLPRWDPLESIGDRREMGIVKRDKSR 280
           ++K +ER    I KV+PG       +           R  P+ESI   RE G     K R
Sbjct: 598 IKKLIERKQAQIRKVYPGLSCFKDEV-----------RQIPIESIPGIRETGWKPSGKER 646

Query: 281 QKSPIFPAMKWDHLLGVVRQIGKFQSS 361
            K P  P   +  L  +++Q+   QS+
Sbjct: 647 GKEPKDPDQLYSTLKTILQQVKSHQSA 673