BP911720 |
Clone id |
YMU001_000008_D04 |
Library |
YMU01 |
Length |
543 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000008_D04. |
Accession |
BP911720 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACAAAGGAATTAGCATTTAGAAGGGGTGAAGAATTGGGGGCGGCAGTAGACGCATCAGG AATATACTAGGCTCTGAGATTAAAGCGCTCACCAACATATGGGACATAGGCGTGCTCTAA ATCTTTAATGTTGTGGGGAAGATTAAGAGGTGCAGAAGAGGGCAGTAAGTTTGGAGTGTA GGCATGCAACATATTGTACTGAAGGATCGATCTAGGTGTAGAGGGGGTATAATCCCTGAA GTGCACAGCTGGTGCTTGCAGCTCATGCCTCAACTCAATACTATAGTGGGGGAGGTAGAG CCAAGTAGGGAAATTGGTGCGCGCGCTCTCAGGACCCCGCATCGCAATCGCTGCACGATC ATGCGCAAATGCAGCTTCCAGCACGATCTCGAATGTGCCTAGCCACTTGTGCTCTTTGGT GACGGGGTTTTGAATCTGTGTCGCAAATCGGCCCCACCGCCATTGTCGCACGCGACGATA CCCCGTGCCGGGGCACACTTGCATTCTTTTGATGTCGCTCATTCGCGGCCGCGAATGAGT ACC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SAD4 |
Definition |
sp|Q9SAD4|ESR1_ARATH Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana |
Align length |
93 |
Score (bit) |
70.1 |
E-value |
6.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6ZH77 |
Definition |
tr|Q6ZH77|Q6ZH77_ORYSJ Os02g0594300 protein OS=Oryza sativa subsp. japonica |
Align length |
61 |
Score (bit) |
72.4 |
E-value |
1.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911720|Adiantum capillus-veneris mRNA, clone: YMU001_000008_D04. (520 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6ZH77|Q6ZH77_ORYSJ Os02g0594300 protein OS=Oryza sativa subs... 72 1e-11 tr|A2X6P9|A2X6P9_ORYSI Putative uncharacterized protein OS=Oryza... 72 1e-11 tr|B6SQ62|B6SQ62_MAIZE AP2 domain containing protein OS=Zea mays... 71 3e-11 tr|A9RF46|A9RF46_PHYPA Predicted protein (Fragment) OS=Physcomit... 70 5e-11 tr|A2YRQ3|A2YRQ3_ORYSI Putative uncharacterized protein OS=Oryza... 70 5e-11 tr|A7NXZ9|A7NXZ9_VITVI Chromosome chr6 scaffold_3, whole genome ... 70 6e-11 tr|A7NW63|A7NW63_VITVI Chromosome chr5 scaffold_2, whole genome ... 70 8e-11 tr|A5B1K7|A5B1K7_VITVI Putative uncharacterized protein OS=Vitis... 70 8e-11 tr|Q6Z4V0|Q6Z4V0_ORYSJ cDNA, clone: J065205D04, full insert sequ... 69 2e-10 tr|B6TX42|B6TX42_MAIZE Branched silkless1 OS=Zea mays PE=2 SV=1 69 2e-10 tr|Q84J59|Q84J59_MAIZE Branched silkless1 OS=Zea mays GN=bd1 PE=... 68 2e-10 tr|B4FGX7|B4FGX7_MAIZE Putative uncharacterized protein OS=Zea m... 68 2e-10 tr|Q8H3Q1|Q8H3Q1_ORYSJ Os07g0669500 protein OS=Oryza sativa subs... 67 4e-10 tr|A9RFA4|A9RFA4_PHYPA Predicted protein OS=Physcomitrella paten... 67 4e-10 tr|A5AWM3|A5AWM3_VITVI Putative uncharacterized protein OS=Vitis... 67 4e-10 tr|A3BN90|A3BN90_ORYSJ Putative uncharacterized protein OS=Oryza... 67 4e-10 tr|A2YPS1|A2YPS1_ORYSI Putative uncharacterized protein OS=Oryza... 67 4e-10 tr|A1KZE8|A1KZE8_ORYRU Frizzy panicle (Fragment) OS=Oryza rufipo... 67 4e-10 tr|A1KZE6|A1KZE6_ORYRU Frizzy panicle (Fragment) OS=Oryza rufipo... 67 4e-10 tr|A1KZD6|A1KZD6_ORYSI Frizzy panicle (Fragment) OS=Oryza sativa... 67 4e-10 tr|A1KZD0|A1KZD0_ORYSJ Frizzy panicle (Fragment) OS=Oryza sativa... 67 4e-10 tr|A1KZC9|A1KZC9_ORYNI Frizzy panicle (Fragment) OS=Oryza nivara... 67 4e-10 tr|A1KZC8|A1KZC8_9ORYZ Frizzy panicle (Fragment) OS=Oryza glumip... 67 4e-10 tr|A1KZC7|A1KZC7_ORYLO Frizzy panicle (Fragment) OS=Oryza longis... 67 4e-10 tr|A1KZC6|A1KZC6_9ORYZ Frizzy panicle (Fragment) OS=Oryza meridi... 67 4e-10 tr|A7QXY1|A7QXY1_VITVI Chromosome undetermined scaffold_235, who... 67 7e-10 tr|Q7XL79|Q7XL79_ORYSJ Os04g0399800 protein OS=Oryza sativa subs... 66 9e-10 tr|Q01LA7|Q01LA7_ORYSA OSIGBa0113L04.1 protein OS=Oryza sativa G... 66 9e-10 tr|B6UA41|B6UA41_MAIZE AP2 domain containing protein OS=Zea mays... 66 9e-10 tr|A7Q3P8|A7Q3P8_VITVI Chromosome chr13 scaffold_48, whole genom... 66 9e-10
>tr|Q6ZH77|Q6ZH77_ORYSJ Os02g0594300 protein OS=Oryza sativa subsp. japonica GN=OJ1067_B01.18 PE=4 SV=1 Length = 345
Score = 72.4 bits (176), Expect = 1e-11 Identities = 36/61 (59%), Positives = 45/61 (73%) Frame = -2
Query: 489 GTGYRRVRQWRWGRFATQIQNPVTKEHKWLGTFEIVLEAAFAHDRAAIAMRGPESARTNF 310 GT YR VR+ WGRFA +I++P +KE +WLGTF+ +AA A+D AA AMRG ARTNF Sbjct: 56 GTRYRGVRRRPWGRFAAEIRDPASKERRWLGTFDTAEQAACAYDVAARAMRGTR-ARTNF 114
Query: 309 P 307 P Sbjct: 115 P 115
>tr|A2X6P9|A2X6P9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07889 PE=4 SV=1 Length = 345
Score = 72.4 bits (176), Expect = 1e-11 Identities = 36/61 (59%), Positives = 45/61 (73%) Frame = -2
Query: 489 GTGYRRVRQWRWGRFATQIQNPVTKEHKWLGTFEIVLEAAFAHDRAAIAMRGPESARTNF 310 GT YR VR+ WGRFA +I++P +KE +WLGTF+ +AA A+D AA AMRG ARTNF Sbjct: 56 GTRYRGVRRRPWGRFAAEIRDPASKERRWLGTFDTAEQAACAYDVAARAMRGTR-ARTNF 114
Query: 309 P 307 P Sbjct: 115 P 115
>tr|B6SQ62|B6SQ62_MAIZE AP2 domain containing protein OS=Zea mays PE=2 SV=1 Length = 294
Score = 71.2 bits (173), Expect = 3e-11 Identities = 35/61 (57%), Positives = 45/61 (73%) Frame = -2
Query: 489 GTGYRRVRQWRWGRFATQIQNPVTKEHKWLGTFEIVLEAAFAHDRAAIAMRGPESARTNF 310 G YR VR+ WGRFA +I++P++KE +WLGTF+ +AA A+D AA AMRG ARTNF Sbjct: 37 GARYRGVRRRPWGRFAAEIRDPMSKERRWLGTFDTAEQAACAYDIAARAMRG-NKARTNF 95
Query: 309 P 307 P Sbjct: 96 P 96
>tr|A9RF46|A9RF46_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_112927 PE=4 SV=1 Length = 105
Score = 70.5 bits (171), Expect = 5e-11 Identities = 37/70 (52%), Positives = 48/70 (68%) Frame = -2
Query: 519 SDIKRMQVCPGTGYRRVRQWRWGRFATQIQNPVTKEHKWLGTFEIVLEAAFAHDRAAIAM 340 + IKR + YR VRQ WGR+A +I++P TKE KWLGTF+ +AA A+D AA +M Sbjct: 29 TSIKRARKVQEGRYRGVRQRPWGRYAAEIRDPNTKERKWLGTFDTAEDAALAYDTAARSM 88
Query: 339 RGPESARTNF 310 RG + ARTNF Sbjct: 89 RGVK-ARTNF 97
>tr|A2YRQ3|A2YRQ3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27998 PE=4 SV=1 Length = 175
Score = 70.5 bits (171), Expect = 5e-11 Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 2/92 (2%) Frame = -2
Query: 513 IKRMQVCPGTGYRRVRQWRWGRFATQIQNPVTKEHKWLGTFEIVLEAAFAHDRAAIAMRG 334 ++R + + Y VR+ WGR+A +I+NP TKE WLGTF+ EAA A+D +AI++ G Sbjct: 26 MRRRRARASSEYLGVRRRPWGRYAAEIRNPYTKERHWLGTFDTAEEAAVAYDLSAISISG 85
Query: 333 PESARTNFPTWLY--LPHYSIELRHELQAPAV 244 +ARTNF LY + H+ L +PAV Sbjct: 86 AAAARTNF---LYPDMHHHHPSLPQHALSPAV 114
>tr|A7NXZ9|A7NXZ9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023927001 PE=4 SV=1 Length = 285
Score = 70.1 bits (170), Expect = 6e-11 Identities = 36/96 (37%), Positives = 60/96 (62%) Frame = -2
Query: 480 YRRVRQWRWGRFATQIQNPVTKEHKWLGTFEIVLEAAFAHDRAAIAMRGPESARTNFPTW 301 +R VRQ WGR+A +I++P ++ WLGT++ EAA +D+AA++++GP +A TNFP+ Sbjct: 120 FRGVRQRPWGRWAAEIRDPTRRKRLWLGTYDTPEEAARVYDKAAVSLKGP-NAVTNFPS- 177
Query: 300 LYLPHYSIELRHELQAPAVHFRDYTPSTPRSILQYN 193 + S+ + Q+ T S+P S+L+YN Sbjct: 178 -VVKTESVATAGQSQSETCSLPSVTASSPTSVLRYN 212
>tr|A7NW63|A7NW63_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019797001 PE=4 SV=1 Length = 365
Score = 69.7 bits (169), Expect = 8e-11 Identities = 35/67 (52%), Positives = 48/67 (71%) Frame = -2
Query: 510 KRMQVCPGTGYRRVRQWRWGRFATQIQNPVTKEHKWLGTFEIVLEAAFAHDRAAIAMRGP 331 +R Q PG + VR+ WGR+A +I++P TKE WLGTF+ EAA A+DRAA++M+G Sbjct: 63 RRKQAEPGR-FLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGT 121
Query: 330 ESARTNF 310 + ARTNF Sbjct: 122 Q-ARTNF 127
>tr|A5B1K7|A5B1K7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003244 PE=4 SV=1 Length = 343
Score = 69.7 bits (169), Expect = 8e-11 Identities = 35/67 (52%), Positives = 48/67 (71%) Frame = -2
Query: 510 KRMQVCPGTGYRRVRQWRWGRFATQIQNPVTKEHKWLGTFEIVLEAAFAHDRAAIAMRGP 331 +R Q PG + VR+ WGR+A +I++P TKE WLGTF+ EAA A+DRAA++M+G Sbjct: 41 RRKQAEPGR-FLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGT 99
Query: 330 ESARTNF 310 + ARTNF Sbjct: 100 Q-ARTNF 105
>tr|Q6Z4V0|Q6Z4V0_ORYSJ cDNA, clone: J065205D04, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0054L03.18 PE=2 SV=1 Length = 175
Score = 68.6 bits (166), Expect = 2e-10 Identities = 32/68 (47%), Positives = 46/68 (67%) Frame = -2
Query: 513 IKRMQVCPGTGYRRVRQWRWGRFATQIQNPVTKEHKWLGTFEIVLEAAFAHDRAAIAMRG 334 ++R + + Y VR+ WGR+A +I+NP TKE WLGTF+ EAA A+D +AI++ G Sbjct: 26 MRRRRARASSEYLGVRRRPWGRYAAEIRNPYTKERHWLGTFDTAEEAAVAYDLSAISISG 85
Query: 333 PESARTNF 310 +ARTNF Sbjct: 86 AAAARTNF 93
>tr|B6TX42|B6TX42_MAIZE Branched silkless1 OS=Zea mays PE=2 SV=1 Length = 314
Score = 68.6 bits (166), Expect = 2e-10 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 9/90 (10%) Frame = -2
Query: 471 VRQWRWGRFATQIQNPVTKEHKWLGTFEIVLEAAFAHDRAAIAMRGPESARTNF----PT 304 VR+ WGR+A +I++P TKE WLGTF+ EAA A+DRAA++M+G + ARTNF T Sbjct: 65 VRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGAQ-ARTNFVYTHAT 123
Query: 303 WLYLP-----HYSIELRHELQAPAVHFRDY 229 + Y P H+ ++ + A H Y Sbjct: 124 YNYPPFLAPFHHPSSVQQQHYGAAPHVGSY 153
|