BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911721|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_D05.
         (530 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P94459|PPSD_BACSU Plipastatin synthetase subunit D OS=Bacillu...    32   2.5  
sp|O13658|YBCB_SCHPO Uncharacterized transcriptional regulatory ...    30   7.2  

>sp|P94459|PPSD_BACSU Plipastatin synthetase subunit D OS=Bacillus
            subtilis GN=ppsD PE=1 SV=1
          Length = 3603

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +3

Query: 21   EYPSSVIN-RLEDSYSRVLSIQSS*TNSPQYVKIIYFLHKNNIFRPHTDMTTPSGKMIPS 197
            +YP   I+  LEDS + +L +QS+  + P++   I +L++ N    H  ++ P+  ++P 
Sbjct: 1577 DYPEERISFLLEDSGTNILLLQSAGLHVPEFTGEIVYLNQTNSGLAHR-LSNPNVDVLPQ 1635

Query: 198  STLY 209
            S  Y
Sbjct: 1636 SLAY 1639


>sp|O13658|YBCB_SCHPO Uncharacterized transcriptional regulatory
           protein C27B12.11c OS=Schizosaccharomyces pombe
           GN=SPBC27B12.11c PE=1 SV=1
          Length = 738

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 375 QHDLRAFIGASISTPSVSVHNASKLLSEQGLILANH---NSSSH*QPVHN 515
           +H LR +   S++ PS+ +H    L SEQ   L +H    ++ H QP +N
Sbjct: 471 EHFLREYAQHSVANPSLLIHQIHGLPSEQVHGLLSHTELGNAMHNQPTYN 520

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911721|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_D05.
         (530 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8GIS0|B8GIS0_9EURY Small GTP-binding protein OS=Candidatus M...    36   1.4  
tr|B3R9M4|B3R9M4_CUPTR Putative uncharacterized protein OS=Cupri...    33   6.9  
tr|A4WLR0|A4WLR0_PYRAR Transcriptional regulator, TrmB OS=Pyroba...    33   6.9  

>tr|B8GIS0|B8GIS0_9EURY Small GTP-binding protein OS=Candidatus
           Methanosphaerula palustris E1-9c GN=Mpal_1570 PE=4 SV=1
          Length = 354

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 21/59 (35%), Positives = 31/59 (52%)
 Frame = +3

Query: 351 NCRYIYAWQHDLRAFIGASISTPSVSVHNASKLLSEQGLILANHNSSSH*QPVHNMLLA 527
           +C Y +  Q  LRA +   +S P V+V N S L+ ++G +L +  SS     V   LLA
Sbjct: 241 HCGYQFEEQEQLRAEVEEMVSVPMVTVINKSDLVKKEGYMLMSTKSSEGVDEVLTALLA 299


>tr|B3R9M4|B3R9M4_CUPTR Putative uncharacterized protein
           OS=Cupriavidus taiwanensis (strain R1 / LMG 19424)
           GN=RALTA_B0988 PE=4 SV=1
          Length = 194

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = -3

Query: 465 GLVQRVILKHYALTRLEWRWKHR*KLLDHAAKHKYIGSYFEAIGCFDTGM------LIFY 304
           G VQR++L H+ +  L W W H    + H   H  +   +E +  +D G+       + Y
Sbjct: 109 GGVQRIVLCHFPI--LSWNWMHHGSWMLHGHSHGTLRHPYEDMRLYDVGVDPNGLQPVPY 166

Query: 303 WTCKLLL 283
           W  K ++
Sbjct: 167 WKIKQIM 173


>tr|A4WLR0|A4WLR0_PYRAR Transcriptional regulator, TrmB
           OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM
           11321) GN=Pars_1776 PE=3 SV=1
          Length = 307

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 30/106 (28%), Positives = 44/106 (41%)
 Frame = +3

Query: 153 PHTDMTTPSGKMIPSSTLYRGFESQPSLLLSRDVWILHKLSKLPKAIYRSNRR*ACLCQS 332
           P T  TT S  +  +ST ++   +   L     V +    S L  A+YR  R      Q 
Sbjct: 185 PLTQPTTSSPVLSETSTTHQVVHTAQELTPFLLVAVAVAASALGFALYRKARMAPSATQL 244

Query: 333 IQ*LQNNCRYIYAWQHDLRAFIGASISTPSVSVHNASKLLSEQGLI 470
            +       Y++       A I   +S P  +VH A + L+EQGLI
Sbjct: 245 SEVDSEILAYLHKRGGAYEAQIARELSLPRTTVHRAVRRLAEQGLI 290