BP911725
Clone id YMU001_000008_D09
Library
Length 538
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000008_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGGAGAATTCGCGGCCGCAGGAATTTTGTTCTCTTTACATGCTTAAACTGGATCTCTTC
AAAGAACTTTAGCAGCTTCTTACTGGCAAAAAACCAATGCTTCAAGGAATCCCTGTTTAC
TTGCCATTGTCCTATTGCTTGATGACCAACAACGCATCTCCTTTCACCACCAACCTGGAA
ATGCCAAACTCCATGCACTGCTTCAAACCTAAATGGAGGGCGAGGTACTCCACTTCATTG
TTGGTGTGGACATCCTCCAAATCATAGGCCTTTGAAAATATAACCCTGCCGTGTGGATCC
TGTATTTCCACACCATCTCCTGCTTTCTGCATCACCCTCCTATATGCACCATCAAACCAC
ATGGTAAATGCTCCCTCCAAGTCCGGCCCCTCTTTGGTTTCATTACGTACCACCCTTGGA
TAAACCGGTAAATCAACGACCTTGCTAACCAAAATATCTGCCTAGTGAGACCAACTAGTG
TGGTCGATCCTAAACTCGAACTCGAACTCTTGCAACTCCAACACCCACTTCATGATGA
■■Homology search results ■■ -
sp_hit_id P54164
Definition sp|P54164|YPEP_BACSU Uncharacterized protein ypeP OS=Bacillus subtilis
Align length 41
Score (bit) 39.7
E-value 0.008
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911725|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_D09.
(510 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P54164|YPEP_BACSU Uncharacterized protein ypeP OS=Bacillus su... 40 0.008
sp|Q3A9M2|SYK_CARHZ Lysyl-tRNA synthetase OS=Carboxydothermus hy... 32 2.3
sp|P54162|RNHL_BACSU 14.7 kDa ribonuclease H-like protein OS=Bac... 31 3.9
sp|P08151|GLI1_HUMAN Zinc finger protein GLI1 OS=Homo sapiens GN... 30 5.0
sp|Q8TB05|F100A_HUMAN Protein FAM100A OS=Homo sapiens GN=FAM100A... 30 5.0
sp|P64956|Y2253_MYCBO Uncharacterized protein Mb2253c OS=Mycobac... 30 5.0
sp|P64955|Y2228_MYCTU Uncharacterized protein Rv2228c/MT2287 OS=... 30 5.0
sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus... 30 8.5
sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7... 30 8.5
sp|Q8BTK5|SMYD4_MOUSE SET and MYND domain-containing protein 4 O... 30 8.6

>sp|P54164|YPEP_BACSU Uncharacterized protein ypeP OS=Bacillus
subtilis GN=ypeP PE=4 SV=1
Length = 120

Score = 39.7 bits (91), Expect = 0.008
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = -3

Query: 217 TNNEVEYLALHLGLKQCMEFGISR--LVVKGDALLVIKQ*D 101
TNNE EY AL+ +++ E G SR + +KGD+L+V+ Q D
Sbjct: 11 TNNEAEYAALYEAIREVRELGASRNSITIKGDSLVVLNQLD 51


>sp|Q3A9M2|SYK_CARHZ Lysyl-tRNA synthetase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=lysS PE=3
SV=1
Length = 488

Score = 31.6 bits (70), Expect = 2.3
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = -3

Query: 412 VVDLPVYPRVVRNETKEGPDLEGAFTMWFDG-AYRRVMQKAGDGVEIQDPHGRVIFSKAY 236
V+D PV + KE PDL F ++ G + D ++ ++ + + ++A
Sbjct: 373 VIDYPVEVSPLAKRQKENPDLTYRFELFIYGREMANAFSELNDPIDQKERFLKQLEARAK 432

Query: 235 DLEDVHTNNEVEYLALHLGLKQC--MEFGISRLVV 137
E+ H +E AL G+ + GI RLV+
Sbjct: 433 GNEEAHMMDEDYITALEYGMPPAGGLGIGIDRLVM 467


>sp|P54162|RNHL_BACSU 14.7 kDa ribonuclease H-like protein
OS=Bacillus subtilis GN=rnhA PE=1 SV=1
Length = 132

Score = 30.8 bits (68), Expect = 3.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3

Query: 223 VHTNNEVEYLALHLGLKQCMEFGISRLVVKGDALLV 116
VHTN E E+LAL G+K C G + + D+ +V
Sbjct: 39 VHTNQEAEFLALIEGMKLCATRGYQSVSFRTDSDIV 74


>sp|P08151|GLI1_HUMAN Zinc finger protein GLI1 OS=Homo sapiens
GN=GLI1 PE=1 SV=1
Length = 1106

Score = 30.4 bits (67), Expect = 5.0
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = +1

Query: 346 PPSPAPLWFHYVPP------LDKPVNQRPC*PKYLPSETN*C 453
PP P PL+ HY P P Q P P YLPSE C
Sbjct: 841 PPHPQPLFSHYPQPSPPQYLQSGPYTQPP--PDYLPSEPRPC 880


>sp|Q8TB05|F100A_HUMAN Protein FAM100A OS=Homo sapiens GN=FAM100A
PE=2 SV=1
Length = 177

Score = 30.4 bits (67), Expect = 5.0
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +1

Query: 184 NGGRGTPLHCWCGHPPNHRPLKI*PCRVDPVFPHHLLLSASP--SYMHHQ---TTW*MLP 348
+GG G+P+ PP H P +P +ASP HHQ W P
Sbjct: 93 SGGSGSPMAATATSPPPHFPHAATSSSAASSWP----TAASPPGGPQHHQPQPPLWTPTP 148

Query: 349 PSPAPLWFHYVPPL 390
PSPA W PPL
Sbjct: 149 PSPASDW----PPL 158


>sp|P64956|Y2253_MYCBO Uncharacterized protein Mb2253c
OS=Mycobacterium bovis GN=Mb2253c PE=4 SV=1
Length = 364

Score = 30.4 bits (67), Expect = 5.0
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -3

Query: 325 DGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVHTNNEVEYLALHLGLKQCMEFGISR 146
DG R AG G + + +++ TNN EY L GL ++ G +
Sbjct: 8 DGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATE 67

Query: 145 LVVKGDALLVIKQ 107
V D+ LV++Q
Sbjct: 68 AAVLMDSKLVVEQ 80


>sp|P64955|Y2228_MYCTU Uncharacterized protein Rv2228c/MT2287
OS=Mycobacterium tuberculosis GN=Rv2228c PE=4 SV=1
Length = 364

Score = 30.4 bits (67), Expect = 5.0
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -3

Query: 325 DGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVHTNNEVEYLALHLGLKQCMEFGISR 146
DG R AG G + + +++ TNN EY L GL ++ G +
Sbjct: 8 DGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATE 67

Query: 145 LVVKGDALLVIKQ 107
V D+ LV++Q
Sbjct: 68 AAVLMDSKLVVEQ 80


>sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus
musculus GN=Trerf1 PE=2 SV=1
Length = 1205

Score = 29.6 bits (65), Expect = 8.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1

Query: 262 RVDPVFPHHLLLSASPSYMHHQTTW*MLPPSPAPLW 369
RV PH LLS S ++++ + PPSP+ +W
Sbjct: 441 RVTSTLPHQPLLSPSGIHLNNMGSQHQQPPSPSAMW 476


>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7
OS=Mus musculus GN=Chd7 PE=2 SV=1
Length = 2986

Score = 29.6 bits (65), Expect = 8.5
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +1

Query: 220 GHPPNHRPLKI*PCRVDPVFPHHLLLSASPSYMHHQTTW*MLPPSP------APLWFH-- 375
G P+ + L P P+ PH L +SP + HHQ W L PSP P+ H
Sbjct: 497 GQQPSFQQLPTCP----PLQPHPGLHQSSPPHPHHQ-PWAQLHPSPQNTPQKVPVHQHSP 551

Query: 376 YVPPLDKPV 402
P L+KPV
Sbjct: 552 SEPFLEKPV 560


>sp|Q8BTK5|SMYD4_MOUSE SET and MYND domain-containing protein 4
OS=Mus musculus GN=Smyd4 PE=2 SV=2
Length = 799

Score = 29.6 bits (65), Expect = 8.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3

Query: 150 EMPNSMHCFKPKWRARYSTSLLVWTSSKS*AFENITLPCGSC 275
EMP HC + KW R ++ L + T+PCGSC
Sbjct: 273 EMPRPHHCLENKWDTRVTSGDLY--CHRCLKHTLATVPCGSC 312


tr_hit_id Q7XX81
Definition tr|Q7XX81|Q7XX81_ORYSJ OSJNBb0089K06.14 protein OS=Oryza sativa subsp. japonica
Align length 148
Score (bit) 64.3
E-value 3.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911725|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_D09.
(510 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7XX81|Q7XX81_ORYSJ OSJNBb0089K06.14 protein OS=Oryza sativa ... 64 3e-09
tr|Q7XPH0|Q7XPH0_ORYSA OSJNBb0003B01.13 protein OS=Oryza sativa ... 62 2e-08
tr|Q01HX7|Q01HX7_ORYSA OSIGBa0138H21-OSIGBa0138E01.6 protein OS=... 62 2e-08
tr|Q0J6G5|Q0J6G5_ORYSJ Os08g0322200 protein OS=Oryza sativa subs... 61 4e-08
tr|Q65WT8|Q65WT8_ORYSJ Putative polyprotein OS=Oryza sativa subs... 60 5e-08
tr|Q53M61|Q53M61_ORYSJ Retrotransposon protein, putative, Ty3-gy... 60 5e-08
tr|Q2R6D6|Q2R6D6_ORYSJ Retrotransposon protein, putative, Ty3-gy... 60 5e-08
tr|Q65WT1|Q65WT1_ORYSJ Putative polyprotein OS=Oryza sativa subs... 60 6e-08
tr|Q8LH63|Q8LH63_ORYSJ Putatitive retrotransposon Cinful-1 OS=Or... 60 8e-08
tr|Q7XP98|Q7XP98_ORYSJ OSJNBb0034G17.13 protein OS=Oryza sativa ... 60 8e-08
tr|Q2QR93|Q2QR93_ORYSJ Retrotransposon protein, putative, unclas... 60 8e-08
tr|Q01KA8|Q01KA8_ORYSA OSIGBa0135C13.3 protein OS=Oryza sativa G... 60 8e-08
tr|Q6WAY7|Q6WAY7_PEA Gag/pol polyprotein (Fragment) OS=Pisum sat... 51 9e-08
tr|Q94LM2|Q94LM2_ORYSA Putative polyprotein OS=Oryza sativa GN=O... 59 1e-07
tr|Q5JQX4|Q5JQX4_ORYSA OSJNBb0015D13.5 protein OS=Oryza sativa G... 59 1e-07
tr|Q2QTA7|Q2QTA7_ORYSJ Retrotransposon protein, putative, Ty3-gy... 59 1e-07
tr|Q2QNW1|Q2QNW1_ORYSJ Retrotransposon protein, putative, unclas... 59 1e-07
tr|Q6ATI6|Q6ATI6_ORYSJ Retrotransposon protein, putative, unclas... 59 2e-07
tr|Q10NR8|Q10NR8_ORYSJ Transposon protein, putative, unclassifie... 59 2e-07
tr|Q10DK0|Q10DK0_ORYSJ Retrotransposon protein, putative, unclas... 59 2e-07
tr|Q5W7A5|Q5W7A5_ORYSJ Putative polyprotein OS=Oryza sativa subs... 58 2e-07
tr|Q53N40|Q53N40_ORYSJ Retrotransposon protein, putative, unclas... 58 2e-07
tr|Q10L58|Q10L58_ORYSJ Transposon protein, putative, unclassifie... 58 2e-07
tr|Q6WAY3|Q6WAY3_PEA Gag/pol polyprotein OS=Pisum sativum PE=4 SV=1 50 2e-07
tr|Q7XKU4|Q7XKU4_ORYSJ OSJNBa0022H21.13 protein OS=Oryza sativa ... 58 3e-07
tr|Q60D74|Q60D74_ORYSJ Putative polyprotein OS=Oryza sativa subs... 58 3e-07
tr|Q53MV2|Q53MV2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 58 3e-07
tr|Q2R5Q8|Q2R5Q8_ORYSJ Retrotransposon protein, putative, Ty3-gy... 58 3e-07
tr|Q10LZ7|Q10LZ7_ORYSJ Retrotransposon protein, putative, unclas... 58 3e-07
tr|B6Y3C7|B6Y3C7_ANATH Ribonuclease H OS=Anaerocellum thermophil... 57 4e-07

>tr|Q7XX81|Q7XX81_ORYSJ OSJNBb0089K06.14 protein OS=Oryza sativa
subsp. japonica GN=OSJNBb0089K06.14 PE=4 SV=1
Length = 606

Score = 64.3 bits (155), Expect = 3e-09
Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Frame = -3

Query: 508 IMKWVLELQEFEFEFRIDHT-----------SWSH*ADILVSKVVDLPVYPRVVRNETKE 362
++KW +EL EF+ F HT W+ D+++S V LP E
Sbjct: 36 VVKWAIELAEFDLHFEPQHTIKSQVLADFVAEWTPVDDLVLSNVPSLP--------GDGE 87

Query: 361 GPDLE---GAFTMWFDGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVHTNNEVEYLA 191
P+ + G + M FDG+ +Q AG GV + P G ++ L+ TNN EY
Sbjct: 88 DPNADIRGGHWVMHFDGSLN--LQGAGAGVTLTSPSGDIL-KYVVRLDFRATNNMAEYEG 144

Query: 190 LHLGLKQCMEFGISRLVVKGDALLVIKQ 107
L GL+ GI RL+V GD+ LV+ Q
Sbjct: 145 LLAGLRAAAGMGIRRLLVLGDSQLVVNQ 172


>tr|Q7XPH0|Q7XPH0_ORYSA OSJNBb0003B01.13 protein OS=Oryza sativa
GN=OSJNBb0003B01.13 PE=4 SV=2
Length = 1144

Score = 62.0 bits (149), Expect = 2e-08
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Frame = -3

Query: 508 IMKWVLELQEFEFEFRIDHTSWSH*-ADILVSKV-VDLPVYPRVVRNETKE---GPDLEG 344
+++W +EL EF+ F H S AD + VD P+ V + +E D+ G
Sbjct: 518 VVRWAIELAEFDLRFEPRHAIKSQILADFIAEWTPVDEPIPSNVPFSPGEEEDPNADIRG 577

Query: 343 A-FTMWFDGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVHTNNEVEYLALHLGLKQC 167
+ M FDG+ +Q AG GV + P+G V+ L+ TNN EY L GL+
Sbjct: 578 GHWVMHFDGSLN--LQGAGVGVTLTSPNGDVL-KYVVRLDIRATNNMAEYEGLLAGLRAA 634

Query: 166 MEFGISRLVVKGDALLVIKQ 107
E GI RL+V GD+ LV+ Q
Sbjct: 635 AEMGIRRLLVLGDSQLVVNQ 654


>tr|Q01HX7|Q01HX7_ORYSA OSIGBa0138H21-OSIGBa0138E01.6 protein
OS=Oryza sativa GN=OSIGBa0138H21-OSIGBa0138E01.6 PE=4
SV=1
Length = 1054

Score = 62.0 bits (149), Expect = 2e-08
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Frame = -3

Query: 508 IMKWVLELQEFEFEFRIDHTSWSH*-ADILVSKV-VDLPVYPRVVRNETKE---GPDLEG 344
+++W +EL EF+ F H S AD + VD P+ V + +E D+ G
Sbjct: 518 VVRWAIELAEFDLRFEPRHAIKSQILADFIAEWTPVDEPIPSNVPFSPGEEEDPNADIRG 577

Query: 343 A-FTMWFDGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVHTNNEVEYLALHLGLKQC 167
+ M FDG+ +Q AG GV + P+G V+ L+ TNN EY L GL+
Sbjct: 578 GHWVMHFDGSLN--LQGAGVGVTLTSPNGDVL-KYVVRLDIRATNNMAEYEGLLAGLRAA 634

Query: 166 MEFGISRLVVKGDALLVIKQ 107
E GI RL+V GD+ LV+ Q
Sbjct: 635 AEMGIRRLLVLGDSQLVVNQ 654


>tr|Q0J6G5|Q0J6G5_ORYSJ Os08g0322200 protein OS=Oryza sativa subsp.
japonica GN=Os08g0322200 PE=4 SV=1
Length = 894

Score = 60.8 bits (146), Expect = 4e-08
Identities = 49/149 (32%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Frame = -3

Query: 508 IMKWVLELQEFEFEFRIDH-----------TSWSH*ADILVSKVVDLPVYPRVVRNETKE 362
++KW +EL EF+ F H W+ D + S V LP E
Sbjct: 461 VVKWAIELAEFDLHFEPWHMIKSQVLADFIAEWTPVDDPIPSNVPSLP--------GDAE 512

Query: 361 GPDLE---GAFTMWFDGAYRRVMQKAGDGVEIQDPHGRVI-FSKAYDLEDVHTNNEVEYL 194
P+ + G + M FDG+ +Q AG GV + P G V+ + D D TNN EY
Sbjct: 513 DPNADIRVGHWVMHFDGSLN--LQSAGAGVTLTSPSGDVLKYVVRLDFRD--TNNMAEYE 568

Query: 193 ALHLGLKQCMEFGISRLVVKGDALLVIKQ 107
L GL+ GI RL+V GD+ LV+ Q
Sbjct: 569 GLLAGLRAATGLGIRRLLVLGDSQLVVNQ 597


>tr|Q65WT8|Q65WT8_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica GN=P0615D12.5 PE=4 SV=1
Length = 2027

Score = 60.5 bits (145), Expect = 5e-08
Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Frame = -3

Query: 508 IMKWVLELQEFEFEFRIDHTSWSH*ADILVSKVVDLPVYPRVVR-NETKEGPDLEGAFTM 332
++KW +EL EF+ F H S V++ P + N P G + M
Sbjct: 1379 VVKWTIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEPVSIPEVNSDPSQPPYTGHWVM 1438

Query: 331 WFDGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVHTNNEVEYLALHLGLKQCMEFGI 152
FDG+ +Q AG GV + P G V+ L+ TNN EY L GL+ GI
Sbjct: 1439 QFDGSLS--LQGAGAGVTLTSPTGDVL-RYLVRLDFRATNNMAEYEGLLAGLRVAAGLGI 1495

Query: 151 SRLVVKGDALLVIKQ 107
RL+V GD+ LV+ Q
Sbjct: 1496 RRLLVLGDSQLVVNQ 1510


>tr|Q53M61|Q53M61_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
sub-class OS=Oryza sativa subsp. japonica
GN=LOC_Os11g20420 PE=4 SV=1
Length = 787

Score = 60.5 bits (145), Expect = 5e-08
Identities = 47/134 (35%), Positives = 66/134 (49%)
Frame = -3

Query: 508 IMKWVLELQEFEFEFRIDHTSWSH*ADILVSKVVDLPVYPRVVRNETKEGPDLEGAFTMW 329
I KWV+EL +F+ F + T+ + +L V D + + N + D E +TM
Sbjct: 201 IAKWVVELSQFDVHF-VPRTTIK--SQVLADFVADWTM----LDNRSDSQTDSE-TWTMA 252

Query: 328 FDGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVHTNNEVEYLALHLGLKQCMEFGIS 149
FDGA+ Q AG G + P G F A L TNN EY L +G++ G+
Sbjct: 253 FDGAFNS--QGAGTGFILTSPSGDQ-FKHAIHLNFRATNNTAEYEGLLIGIRAAAALGVK 309

Query: 148 RLVVKGDALLVIKQ 107
RL+VKGD+ LV Q
Sbjct: 310 RLIVKGDSELVANQ 323


>tr|Q2R6D6|Q2R6D6_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os11g20420 PE=4 SV=1
Length = 772

Score = 60.5 bits (145), Expect = 5e-08
Identities = 47/134 (35%), Positives = 66/134 (49%)
Frame = -3

Query: 508 IMKWVLELQEFEFEFRIDHTSWSH*ADILVSKVVDLPVYPRVVRNETKEGPDLEGAFTMW 329
I KWV+EL +F+ F + T+ + +L V D + + N + D E +TM
Sbjct: 201 IAKWVVELSQFDVHF-VPRTTIK--SQVLADFVADWTM----LDNRSDSQTDSE-TWTMA 252

Query: 328 FDGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVHTNNEVEYLALHLGLKQCMEFGIS 149
FDGA+ Q AG G + P G F A L TNN EY L +G++ G+
Sbjct: 253 FDGAFNS--QGAGTGFILTSPSGDQ-FKHAIHLNFRATNNTAEYEGLLIGIRAAAALGVK 309

Query: 148 RLVVKGDALLVIKQ 107
RL+VKGD+ LV Q
Sbjct: 310 RLIVKGDSELVANQ 323


>tr|Q65WT1|Q65WT1_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica GN=P0615D12.14 PE=4 SV=1
Length = 1992

Score = 60.1 bits (144), Expect = 6e-08
Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Frame = -3

Query: 508 IMKWVLELQEFEFEFRIDHTSWSH*ADILVSKVVDLPVYPRVVR-NETKEGPDLEGAFTM 332
++KW +EL EF+ F H S V++ P + N P G + M
Sbjct: 1344 VVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEPVSIPEVNSDPSQPPHTGHWVM 1403

Query: 331 WFDGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVH-TNNEVEYLALHLGLKQCMEFG 155
FDG+ +Q AG GV + P G V+ + D D TNN EY L GL+ G
Sbjct: 1404 QFDGSLS--LQGAGAGVTLTSPTGDVL--RYLDRLDFRATNNMAEYEGLLAGLRVAAGLG 1459

Query: 154 ISRLVVKGDALLVIKQ 107
I RL+V GD+ LV+ Q
Sbjct: 1460 IRRLLVLGDSQLVVNQ 1475


>tr|Q8LH63|Q8LH63_ORYSJ Putatitive retrotransposon Cinful-1 OS=Oryza
sativa subsp. japonica GN=OJ1005_B10.27 PE=4 SV=1
Length = 1739

Score = 59.7 bits (143), Expect = 8e-08
Identities = 50/140 (35%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Frame = -3

Query: 508 IMKWVLELQEFEFEFRIDHTSWSH*-ADILVSKV-VDLPV---YPRVVRNETKEGPDLEG 344
++KW +EL EF+ F H S AD + VD PV P E D+ G
Sbjct: 1115 VVKWAIELAEFDLHFEPRHMIKSQVLADFIAEWTPVDEPVPSSVPFPPGEEEDPNADIRG 1174

Query: 343 A-FTMWFDGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVHTNNEVEYLALHLGLKQC 167
+ M FDG+ +Q AG GV + P G V+ L+ TNN EY L GL+
Sbjct: 1175 GHWIMHFDGSLN--LQGAGAGVTLTSPSGDVL-KYVVRLDFRATNNMAEYEGLLAGLRTA 1231

Query: 166 MEFGISRLVVKGDALLVIKQ 107
GI RL+V GD+ LV+ Q
Sbjct: 1232 AGMGIRRLLVLGDSQLVVNQ 1251


>tr|Q7XP98|Q7XP98_ORYSJ OSJNBb0034G17.13 protein OS=Oryza sativa
subsp. japonica GN=OSJNBb0034G17.13 PE=4 SV=1
Length = 787

Score = 59.7 bits (143), Expect = 8e-08
Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Frame = -3

Query: 508 IMKWVLELQEFEFEFRIDHTSWSH*ADILVSKVVDLPVYPRVVR-NETKEGPDLEGAFTM 332
++KW +EL EF+ F H S L + V + P + ET GP
Sbjct: 251 VVKWAIELSEFDLHFEPRHAIKSQ---ALANFVAEWTPAPEPISVPETSSGPSQLPPTAY 307

Query: 331 W---FDGAYRRVMQKAGDGVEIQDPHGRVIFSKAYDLEDVHTNNEVEYLALHLGLKQCME 161
W FDG+ +Q AG GV + P+G V+ L+ TNN EY L GL+
Sbjct: 308 WVMQFDGSLS--LQGAGAGVTLTSPNGDVL-RYLVRLDFRATNNMAEYEGLLAGLRVAAG 364

Query: 160 FGISRLVVKGDALLVIKQ 107
GI RL+V GD+ LV+ Q
Sbjct: 365 LGIRRLLVLGDSQLVVNQ 382