BP911733 |
Clone id |
YMU001_000008_E09 |
Library |
YMU01 |
Length |
527 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000008_E09. |
Accession |
BP911733 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GAAGAATTCGCACTCTCCAATATCTTTACAAGCTCCCTCGCAAACTTTGAATCCTGATCT GAAAAAAAGGTATAGGCCTCACCAGTGGCTCCAGCCCTTCCTGTCCGTCCAATTCGATGA ACATAGTCTTCGACTCCTGTTGGAAAGTCATAGTTGATGACAACCCTGATATCTTTGACA TCGAGTCCCCTGGCAGCAACATCAGTCGCAACCAAAATTGGACACCTACCAGCTTTGAAC TGAGCCAGGACGTGATCTCTTTCACTCTGTGACTTATCACCATGAATGGCAACGGCTCGA AGTCCTCGTGATAGACTGCGTGCAAGCTGATCACACATCTTTATGGTGGAGCAAAAGATA ATCACTTTCGCCCCTGGTTCTTGGTTGCGAAGAATCTCCTCTAGCCTTCTTTGTTTGTGA AAGGGCTGCACCACCTCTACATGCTGTGTAATGGCCTTGTTCGCCGTAAGCTCGTCTGCA TTTCCAATGTTGACATGCGCAGCATGAGTACCTGCAGGTAATATCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46942 |
Definition |
sp|P46942|DB10_NICSY ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris |
Align length |
167 |
Score (bit) |
243.0 |
E-value |
5.0e-64 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2QKB1 |
Definition |
tr|Q2QKB1|Q2QKB1_WHEAT DEAD-box ATPase-RNA-helicase (Fragment) OS=Triticum aestivum |
Align length |
168 |
Score (bit) |
241.0 |
E-value |
2.0e-62 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911733|Adiantum capillus-veneris mRNA, clone: YMU001_000008_E09. (527 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2QKB1|Q2QKB1_WHEAT DEAD-box ATPase-RNA-helicase (Fragment) O... 241 2e-62 tr|A9S1Y4|A9S1Y4_PHYPA Predicted protein OS=Physcomitrella paten... 240 3e-62 tr|A9SYT2|A9SYT2_PHYPA Predicted protein OS=Physcomitrella paten... 239 6e-62 tr|B8ADH5|B8ADH5_ORYSI Putative uncharacterized protein OS=Oryza... 236 5e-61 tr|B7EQA6|B7EQA6_ORYSJ cDNA clone:J023079L21, full insert sequen... 236 5e-61 tr|A2ZPS5|A2ZPS5_ORYSJ Putative uncharacterized protein OS=Oryza... 236 5e-61 tr|A7PM74|A7PM74_VITVI Chromosome chr14 scaffold_21, whole genom... 233 6e-60 tr|Q2QZE8|Q2QZE8_ORYSJ Retrotransposon protein, putative, unclas... 229 6e-59 tr|Q0IR12|Q0IR12_ORYSJ Os11g0689400 protein OS=Oryza sativa subs... 229 6e-59 tr|B8AE58|B8AE58_ORYSI Putative uncharacterized protein OS=Oryza... 229 6e-59 tr|A3BQQ8|A3BQQ8_ORYSJ Putative uncharacterized protein OS=Oryza... 229 6e-59 tr|A7NVW1|A7NVW1_VITVI Chromosome chr5 scaffold_2, whole genome ... 228 1e-58 tr|Q9SP26|Q9SP26_PEA P72 DEAD box protein OS=Pisum sativum PE=2 ... 224 2e-57 tr|B7EC00|B7EC00_ORYSJ cDNA clone:J013059F16, full insert sequen... 224 2e-57 tr|A2WR82|A2WR82_ORYSI Putative uncharacterized protein OS=Oryza... 218 1e-55 tr|A9RXX9|A9RXX9_PHYPA Predicted protein OS=Physcomitrella paten... 200 4e-50 tr|A8HPW8|A8HPW8_CHLRE Predicted protein (Fragment) OS=Chlamydom... 179 1e-43 tr|A4S5B0|A4S5B0_OSTLU Predicted protein (Fragment) OS=Ostreococ... 170 5e-41 tr|A7P6Q4|A7P6Q4_VITVI Chromosome chr9 scaffold_7, whole genome ... 166 5e-40 tr|B8ADR3|B8ADR3_ORYSI Putative uncharacterized protein OS=Oryza... 162 7e-39 tr|B4FWP6|B4FWP6_MAIZE Putative uncharacterized protein OS=Zea m... 162 1e-38 tr|B8LKZ7|B8LKZ7_PICSI Putative uncharacterized protein OS=Picea... 162 1e-38 tr|A7PCT3|A7PCT3_VITVI Chromosome chr17 scaffold_12, whole genom... 160 5e-38 tr|A2Q465|A2Q465_MEDTR Helicase, C-terminal OS=Medicago truncatu... 158 1e-37 tr|Q66JB0|Q66JB0_XENLA LOC398649 protein OS=Xenopus laevis GN=dd... 155 2e-36 tr|A9S9X0|A9S9X0_PHYPA Predicted protein OS=Physcomitrella paten... 154 2e-36 tr|Q6S4Y1|Q6S4Y1_MAIZE DEAD box RNA helicase OS=Zea mays GN=DRH1... 152 8e-36 tr|A9V234|A9V234_MONBE p68DDX5 RNA helicase OS=Monosiga brevicol... 150 4e-35 tr|Q3U741|Q3U741_MOUSE Putative uncharacterized protein OS=Mus m... 150 5e-35 tr|A7E307|A7E307_BOVIN DDX17 protein OS=Bos taurus GN=DDX17 PE=2... 150 5e-35
>tr|Q2QKB1|Q2QKB1_WHEAT DEAD-box ATPase-RNA-helicase (Fragment) OS=Triticum aestivum GN=DRH1 PE=2 SV=1 Length = 381
Score = 241 bits (614), Expect = 2e-62 Identities = 122/168 (72%), Positives = 137/168 (81%) Frame = -1
Query: 509 THAAHVNIGNADELTANKAITQHVEVVQPFHKQRRLEEILRNQEPGAKVIIFCSTIKMCD 330 T+ VNIGN DEL ANK+ITQHVEV F K RRL++ILR QEPG+KVIIFCST +MCD Sbjct: 92 TNPVQVNIGNTDELVANKSITQHVEVTTSFEKGRRLDQILRQQEPGSKVIIFCSTKRMCD 151
Query: 329 QLARSLSRGLRAVAIHGDKSQSERDHVLAQFKAGRCPILVATDVAARGLDVKDIRVVINY 150 QL+R+LSR A AIHGDKSQ+ERD VL++F+ GRCPILVATDVAARGLDVKDIRVV+NY Sbjct: 152 QLSRNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 211
Query: 149 DFPTGVEDYVHRIXXXXXXXXXGEAYTFFSDQDSKFARELVKILESAN 6 DFPTGVEDYVHRI G AYTFF DQDSK+A +LVKILE AN Sbjct: 212 DFPTGVEDYVHRIGRTGRAGATGIAYTFFCDQDSKYASDLVKILEGAN 259
>tr|A9S1Y4|A9S1Y4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_180402 PE=3 SV=1 Length = 675
Score = 240 bits (613), Expect = 3e-62 Identities = 117/163 (71%), Positives = 137/163 (84%) Frame = -1
Query: 494 VNIGNADELTANKAITQHVEVVQPFHKQRRLEEILRNQEPGAKVIIFCSTIKMCDQLARS 315 VNIGN DEL+ANK+ITQHVEVV P+ KQRRLE+ILR+QEPG+K+I+FCST +MCD L+R+ Sbjct: 360 VNIGNTDELSANKSITQHVEVVVPYEKQRRLEQILRSQEPGSKIIVFCSTKRMCDMLSRN 419
Query: 314 LSRGLRAVAIHGDKSQSERDHVLAQFKAGRCPILVATDVAARGLDVKDIRVVINYDFPTG 135 L R A AIHGDKSQSERD VL+QF+ GR PILVATDVAARGLD+KDIR V+NYDFPTG Sbjct: 420 LGRDFGAAAIHGDKSQSERDFVLSQFRTGRTPILVATDVAARGLDIKDIRFVVNYDFPTG 479
Query: 134 VEDYVHRIXXXXXXXXXGEAYTFFSDQDSKFARELVKILESAN 6 VEDYVHRI G AYTFFS+QD K+A+EL+K+LE AN Sbjct: 480 VEDYVHRIGRTGRAGATGLAYTFFSEQDGKYAKELIKVLEGAN 522
>tr|A9SYT2|A9SYT2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107194 PE=3 SV=1 Length = 684
Score = 239 bits (610), Expect = 6e-62 Identities = 118/163 (72%), Positives = 137/163 (84%) Frame = -1
Query: 494 VNIGNADELTANKAITQHVEVVQPFHKQRRLEEILRNQEPGAKVIIFCSTIKMCDQLARS 315 VNIGN DEL ANK+ITQ+VEVV P+ KQRRLE+ILR+QEPG+K+IIFCST +MCD L+R+ Sbjct: 355 VNIGNTDELAANKSITQNVEVVVPYEKQRRLEQILRSQEPGSKIIIFCSTKRMCDTLSRN 414
Query: 314 LSRGLRAVAIHGDKSQSERDHVLAQFKAGRCPILVATDVAARGLDVKDIRVVINYDFPTG 135 L R A AIHGDKSQSERD VL+QF+ GR PILVATDVAARGLD+KDIRVV+NYDFPTG Sbjct: 415 LGRDFGAAAIHGDKSQSERDFVLSQFRTGRTPILVATDVAARGLDIKDIRVVVNYDFPTG 474
Query: 134 VEDYVHRIXXXXXXXXXGEAYTFFSDQDSKFARELVKILESAN 6 VEDYVHRI G AYTFFS+QD K+A+EL+K+LE AN Sbjct: 475 VEDYVHRIGRTGRAGATGLAYTFFSEQDGKYAKELIKVLEGAN 517
>tr|B8ADH5|B8ADH5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00586 PE=4 SV=1 Length = 754
Score = 236 bits (602), Expect = 5e-61 Identities = 116/168 (69%), Positives = 140/168 (83%) Frame = -1
Query: 509 THAAHVNIGNADELTANKAITQHVEVVQPFHKQRRLEEILRNQEPGAKVIIFCSTIKMCD 330 ++ VNIGN D+L ANK+ITQ+V+V+ P K RRL++ILR+QEPG+K+IIFCST +MCD Sbjct: 427 SNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCD 486
Query: 329 QLARSLSRGLRAVAIHGDKSQSERDHVLAQFKAGRCPILVATDVAARGLDVKDIRVVINY 150 QLAR+L+R A AIHGDKSQ+ERD VL++F++GRCPILVATDVAARGLD+KDIRVV+NY Sbjct: 487 QLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNY 546
Query: 149 DFPTGVEDYVHRIXXXXXXXXXGEAYTFFSDQDSKFARELVKILESAN 6 DFPTGVEDYVHRI G AYTFF DQDSK+A +LVKILE AN Sbjct: 547 DFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGAN 594
>tr|B7EQA6|B7EQA6_ORYSJ cDNA clone:J023079L21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 759
Score = 236 bits (602), Expect = 5e-61 Identities = 116/168 (69%), Positives = 140/168 (83%) Frame = -1
Query: 509 THAAHVNIGNADELTANKAITQHVEVVQPFHKQRRLEEILRNQEPGAKVIIFCSTIKMCD 330 ++ VNIGN D+L ANK+ITQ+V+V+ P K RRL++ILR+QEPG+K+IIFCST +MCD Sbjct: 431 SNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCD 490
Query: 329 QLARSLSRGLRAVAIHGDKSQSERDHVLAQFKAGRCPILVATDVAARGLDVKDIRVVINY 150 QLAR+L+R A AIHGDKSQ+ERD VL++F++GRCPILVATDVAARGLD+KDIRVV+NY Sbjct: 491 QLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNY 550
Query: 149 DFPTGVEDYVHRIXXXXXXXXXGEAYTFFSDQDSKFARELVKILESAN 6 DFPTGVEDYVHRI G AYTFF DQDSK+A +LVKILE AN Sbjct: 551 DFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGAN 598
>tr|A2ZPS5|A2ZPS5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000547 PE=3 SV=1 Length = 689
Score = 236 bits (602), Expect = 5e-61 Identities = 116/168 (69%), Positives = 140/168 (83%) Frame = -1
Query: 509 THAAHVNIGNADELTANKAITQHVEVVQPFHKQRRLEEILRNQEPGAKVIIFCSTIKMCD 330 ++ VNIGN D+L ANK+ITQ+V+V+ P K RRL++ILR+QEPG+K+IIFCST +MCD Sbjct: 380 SNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCD 439
Query: 329 QLARSLSRGLRAVAIHGDKSQSERDHVLAQFKAGRCPILVATDVAARGLDVKDIRVVINY 150 QLAR+L+R A AIHGDKSQ+ERD VL++F++GRCPILVATDVAARGLD+KDIRVV+NY Sbjct: 440 QLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNY 499
Query: 149 DFPTGVEDYVHRIXXXXXXXXXGEAYTFFSDQDSKFARELVKILESAN 6 DFPTGVEDYVHRI G AYTFF DQDSK+A +LVKILE AN Sbjct: 500 DFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGAN 547
>tr|A7PM74|A7PM74_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020710001 PE=3 SV=1 Length = 642
Score = 233 bits (593), Expect = 6e-60 Identities = 116/163 (71%), Positives = 135/163 (82%) Frame = -1
Query: 494 VNIGNADELTANKAITQHVEVVQPFHKQRRLEEILRNQEPGAKVIIFCSTIKMCDQLARS 315 VNIGN DEL ANKAITQ+VEV+ K +RLE+ILR+QEPG+K+IIFCST KMCDQLAR+ Sbjct: 346 VNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKMCDQLARN 405
Query: 314 LSRGLRAVAIHGDKSQSERDHVLAQFKAGRCPILVATDVAARGLDVKDIRVVINYDFPTG 135 L+R A AIHGDKSQ ERD+VL QF+ GR P+LVATDVAARGLD+KDIRVVINYDFPTG Sbjct: 406 LTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVINYDFPTG 465
Query: 134 VEDYVHRIXXXXXXXXXGEAYTFFSDQDSKFARELVKILESAN 6 VEDYVHRI G AYTFF++QD+K+A +LVK+LE AN Sbjct: 466 VEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGAN 508
>tr|Q2QZE8|Q2QZE8_ORYSJ Retrotransposon protein, putative, unclassified, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g46240 PE=3 SV=1 Length = 1398
Score = 229 bits (584), Expect = 6e-59 Identities = 116/163 (71%), Positives = 133/163 (81%) Frame = -1
Query: 494 VNIGNADELTANKAITQHVEVVQPFHKQRRLEEILRNQEPGAKVIIFCSTIKMCDQLARS 315 VNIG+ DEL ANK+ITQ+VEVV P KQRRLE+ILR QE G+KVIIFCST KMCDQLAR Sbjct: 809 VNIGSIDELVANKSITQYVEVVPPLDKQRRLEQILRAQERGSKVIIFCSTKKMCDQLARD 868
Query: 314 LSRGLRAVAIHGDKSQSERDHVLAQFKAGRCPILVATDVAARGLDVKDIRVVINYDFPTG 135 + R A +IHGDKSQ+ERD+VL QF+ GR PILVATDVAARGLD+KDIRVVINYDFPTG Sbjct: 869 IGRSFGAASIHGDKSQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPTG 928
Query: 134 VEDYVHRIXXXXXXXXXGEAYTFFSDQDSKFARELVKILESAN 6 +EDYVHRI G +YTFFS+QD K+A +LVK+LE AN Sbjct: 929 IEDYVHRIGRTGRAGATGVSYTFFSEQDWKYAGDLVKVLEGAN 971
>tr|Q0IR12|Q0IR12_ORYSJ Os11g0689400 protein OS=Oryza sativa subsp. japonica GN=Os11g0689400 PE=3 SV=1 Length = 2841
Score = 229 bits (584), Expect = 6e-59 Identities = 116/163 (71%), Positives = 133/163 (81%) Frame = -1
Query: 494 VNIGNADELTANKAITQHVEVVQPFHKQRRLEEILRNQEPGAKVIIFCSTIKMCDQLARS 315 VNIG+ DEL ANK+ITQ+VEVV P KQRRLE+ILR QE G+KVIIFCST KMCDQLAR Sbjct: 688 VNIGSIDELVANKSITQYVEVVPPLDKQRRLEQILRAQERGSKVIIFCSTKKMCDQLARD 747
Query: 314 LSRGLRAVAIHGDKSQSERDHVLAQFKAGRCPILVATDVAARGLDVKDIRVVINYDFPTG 135 + R A +IHGDKSQ+ERD+VL QF+ GR PILVATDVAARGLD+KDIRVVINYDFPTG Sbjct: 748 IGRSFGAASIHGDKSQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPTG 807
Query: 134 VEDYVHRIXXXXXXXXXGEAYTFFSDQDSKFARELVKILESAN 6 +EDYVHRI G +YTFFS+QD K+A +LVK+LE AN Sbjct: 808 IEDYVHRIGRTGRAGATGVSYTFFSEQDWKYAGDLVKVLEGAN 850
>tr|B8AE58|B8AE58_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06346 PE=4 SV=1 Length = 1382
Score = 229 bits (584), Expect = 6e-59 Identities = 116/163 (71%), Positives = 133/163 (81%) Frame = -1
Query: 494 VNIGNADELTANKAITQHVEVVQPFHKQRRLEEILRNQEPGAKVIIFCSTIKMCDQLARS 315 VNIG+ DEL ANK+ITQ+VEVV P KQRRLE+ILR QE G+KVIIFCST KMCDQLAR Sbjct: 808 VNIGSIDELVANKSITQYVEVVPPLDKQRRLEQILRAQERGSKVIIFCSTKKMCDQLARD 867
Query: 314 LSRGLRAVAIHGDKSQSERDHVLAQFKAGRCPILVATDVAARGLDVKDIRVVINYDFPTG 135 + R A +IHGDKSQ+ERD+VL QF+ GR PILVATDVAARGLD+KDIRVVINYDFPTG Sbjct: 868 IGRSFGAASIHGDKSQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPTG 927
Query: 134 VEDYVHRIXXXXXXXXXGEAYTFFSDQDSKFARELVKILESAN 6 +EDYVHRI G +YTFFS+QD K+A +LVK+LE AN Sbjct: 928 IEDYVHRIGRTGRAGATGVSYTFFSEQDWKYAGDLVKVLEGAN 970
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