BP911734 |
Clone id |
YMU001_000008_E10 |
Library |
YMU01 |
Length |
355 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000008_E10. |
Accession |
BP911734 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1931Contig1 |
Sequence |
ATATCCTCCTCAGACCACGAAGTTGGCTGTCCAGCAGAAACTTGTAGATTGATGTGCTCG TTAACAATTCCAAGTATTAAAGTAGATTCCGTATTGTGCAAGTATTGCAGAAGTAGATCA AAAGAATACTGGCACATCTTGACATTGACTTTGTTCTCACGTAATGAACGAGCAAGCTCC ATTTCCTGGAGGTGGTCAGAAGACAGAACAGACTCTAATCTCTGTAGATCACGTGAATGT AAGGTTTCATAATCATCTCGGAAGCTTTGAAAGAAAGTCCTGGCTTCTTGTGAGAAACCC TTTGAAACAAGGTCCATGTAGCAATGTAAAAAGACTGGATACAGAATCCGAAGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O13282 |
Definition |
sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe |
Align length |
113 |
Score (bit) |
87.4 |
E-value |
2.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6S7B0 |
Definition |
tr|Q6S7B0|Q6S7B0_ARATH TAF5 OS=Arabidopsis thaliana |
Align length |
116 |
Score (bit) |
176.0 |
E-value |
5.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911734|Adiantum capillus-veneris mRNA, clone: YMU001_000008_E10. (355 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6S7B0|Q6S7B0_ARATH TAF5 OS=Arabidopsis thaliana GN=At5g25150... 176 5e-43 tr|A7P5W9|A7P5W9_VITVI Chromosome chr4 scaffold_6, whole genome ... 169 6e-41 tr|A5BLS8|A5BLS8_VITVI Putative uncharacterized protein OS=Vitis... 162 8e-39 tr|A9STW4|A9STW4_PHYPA TFIID and SAGA complex subunit OS=Physcom... 160 4e-38 tr|B8B0S1|B8B0S1_ORYSI Putative uncharacterized protein OS=Oryza... 153 4e-36 tr|Q67UR9|Q67UR9_ORYSJ Os06g0649500 protein OS=Oryza sativa subs... 151 2e-35 tr|B8B897|B8B897_ORYSI Putative uncharacterized protein OS=Oryza... 148 1e-34 tr|B7F3W6|B7F3W6_ORYSJ cDNA clone:J013072E21, full insert sequen... 125 8e-28 tr|A3BE39|A3BE39_ORYSJ Putative uncharacterized protein OS=Oryza... 113 5e-24 tr|Q7XB58|Q7XB58_ORYSJ Putative TATA box binding protein-associa... 110 3e-23 tr|Q54KH7|Q54KH7_DICDI Transcription initiation factor TFIID sub... 108 1e-22 tr|Q6CEN7|Q6CEN7_YARLI YALI0B14245p OS=Yarrowia lipolytica GN=YA... 105 1e-21 tr|Q00ZU2|Q00ZU2_OSTTA Beta-transducin family (WD-40 repeat) pro... 96 9e-19 tr|A4S3V7|A4S3V7_OSTLU Predicted protein OS=Ostreococcus lucimar... 95 2e-18 tr|Q6BLE6|Q6BLE6_DEBHA DEHA2F14058p OS=Debaryomyces hansenii GN=... 94 3e-18 tr|Q5A6L8|Q5A6L8_CANAL Likely TFIID and SAGA complex component T... 93 7e-18 tr|A3M063|A3M063_PICST TFIID and SAGA subunit OS=Pichia stipitis... 87 4e-16 tr|Q8SQS4|Q8SQS4_ENCCU TRANSCRIPTION INITIATION FACTOR TFIID SUB... 85 2e-15 tr|A7ST98|A7ST98_NEMVE Predicted protein (Fragment) OS=Nematoste... 84 3e-15 tr|A5E0N2|A5E0N2_LODEL Putative uncharacterized protein OS=Lodde... 84 5e-15 tr|Q758K7|Q758K7_ASHGO AEL246Cp OS=Ashbya gossypii GN=AEL246C PE... 81 3e-14 tr|A5DCG3|A5DCG3_PICGU Putative uncharacterized protein OS=Pichi... 79 9e-14 tr|B6K0I5|B6K0I5_SCHJP Transcription factor TFIID complex subuni... 79 1e-13 tr|Q6CM29|Q6CM29_KLULA KLLA0E23453p OS=Kluyveromyces lactis GN=K... 77 3e-13 tr|Q6FJL6|Q6FJL6_CANGA Strain CBS138 chromosome M complete seque... 75 1e-12 tr|B5VEE8|B5VEE8_YEAS6 YBR198Cp-like protein OS=Saccharomyces ce... 75 1e-12 tr|B3LMW2|B3LMW2_YEAS1 Transcription initiation factor TFIID sub... 75 1e-12 tr|A6ZLD9|A6ZLD9_YEAS7 TafII90 OS=Saccharomyces cerevisiae (stra... 75 1e-12 tr|Q4S7N8|Q4S7N8_TETNG Chromosome 18 SCAF14712, whole genome sho... 75 2e-12 tr|B6K3C3|B6K3C3_SCHJP SAGA complex/transcription factor TFIID c... 75 2e-12
>tr|Q6S7B0|Q6S7B0_ARATH TAF5 OS=Arabidopsis thaliana GN=At5g25150 PE=2 SV=1 Length = 669
Score = 176 bits (446), Expect = 5e-43 Identities = 81/116 (69%), Positives = 100/116 (86%) Frame = -3
Query: 353 LRILYPVFLHCYMDLVSKGFSQEARTFFQSFRDDYETLHSRDLQRLESVLSSDHLQEMEL 174 LR++YPVF+HCYMDLV KG +QEAR FF SFR D+E +H RDLQ+LE VLS HL+EME Sbjct: 90 LRVMYPVFIHCYMDLVGKGHTQEARAFFNSFRKDHEMVHLRDLQKLEGVLSPSHLEEMEF 149
Query: 173 ARSLRENKVNVKMCQYSFDLLLQYLHNTESTLILGIVNEHINLQVSAGQPTSWSEE 6 ARSLR++KVN+K CQYS++LLLQYLH+T STL+LGI+NEHIN QV +GQPTS S++ Sbjct: 150 ARSLRKSKVNIKFCQYSYELLLQYLHSTVSTLMLGIINEHINFQVYSGQPTSSSDD 205
>tr|A7P5W9|A7P5W9_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032691001 PE=4 SV=1 Length = 676
Score = 169 bits (428), Expect = 6e-41 Identities = 76/116 (65%), Positives = 98/116 (84%) Frame = -3
Query: 353 LRILYPVFLHCYMDLVSKGFSQEARTFFQSFRDDYETLHSRDLQRLESVLSSDHLQEMEL 174 LR+LYPVF+HC+MDLV+KG QEAR FF SFR+D+E +H RDLQ+LE VLS HL+EME Sbjct: 93 LRVLYPVFIHCFMDLVAKGHIQEARNFFNSFREDHEMMHLRDLQKLEGVLSPSHLEEMEF 152
Query: 173 ARSLRENKVNVKMCQYSFDLLLQYLHNTESTLILGIVNEHINLQVSAGQPTSWSEE 6 A SLR++KV++K+CQYS++LLLQYLH T+S +LG++NEHIN QVS GQP S S++ Sbjct: 153 AHSLRQSKVSIKICQYSYELLLQYLHKTQSITMLGVINEHINFQVSPGQPASISDD 208
>tr|A5BLS8|A5BLS8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005883 PE=4 SV=1 Length = 337
Score = 162 bits (410), Expect = 8e-39 Identities = 77/126 (61%), Positives = 98/126 (77%), Gaps = 10/126 (7%) Frame = -3
Query: 353 LRILYPVFLHCYMDLVSKGFSQEARTFFQSFRDDYETLHSRDLQRLESVLSSDHL----- 189 LR+LYPVF+HC+MDLV+KG QEAR FF SFR+D+E +H RDLQ+LE VLS HL Sbjct: 110 LRVLYPVFIHCFMDLVAKGHIQEARNFFNSFREDHEMMHLRDLQKLEGVLSPSHLEKHLI 169
Query: 188 -----QEMELARSLRENKVNVKMCQYSFDLLLQYLHNTESTLILGIVNEHINLQVSAGQP 24 QEME A SLR++KV++K+CQYS++LLLQYLH T+S +LG++NEHIN QVS GQP Sbjct: 170 IITSVQEMEFAHSLRQSKVSIKICQYSYELLLQYLHKTQSITMLGVINEHINFQVSPGQP 229
Query: 23 TSWSEE 6 S S++ Sbjct: 230 ASISDD 235
>tr|A9STW4|A9STW4_PHYPA TFIID and SAGA complex subunit OS=Physcomitrella patens subsp. patens GN=TAFV1501 PE=4 SV=1 Length = 673
Score = 160 bits (404), Expect = 4e-38 Identities = 75/117 (64%), Positives = 92/117 (78%) Frame = -3
Query: 353 LRILYPVFLHCYMDLVSKGFSQEARTFFQSFRDDYETLHSRDLQRLESVLSSDHLQEMEL 174 LRILYPVF HCY+DLV KGF+QEAR F Q FR+D+E H RD+Q+LE VLS HL E EL Sbjct: 89 LRILYPVFAHCYIDLVGKGFTQEARDFLQRFREDHEASHVRDIQKLEGVLSPQHLHESEL 148
Query: 173 ARSLRENKVNVKMCQYSFDLLLQYLHNTESTLILGIVNEHINLQVSAGQPTSWSEED 3 +LR NK +VKMCQYSF+LLLQYLH T+S L+LGIVNEH+N+ V G P++ ++D Sbjct: 149 VLTLRNNKQSVKMCQYSFELLLQYLHGTDSMLMLGIVNEHLNIHVLPGPPSALPKDD 205
>tr|B8B0S1|B8B0S1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23915 PE=4 SV=1 Length = 654
Score = 153 bits (387), Expect = 4e-36 Identities = 67/116 (57%), Positives = 96/116 (82%) Frame = -3
Query: 353 LRILYPVFLHCYMDLVSKGFSQEARTFFQSFRDDYETLHSRDLQRLESVLSSDHLQEMEL 174 LR+LYPVF+H +MDLV++G +QEAR+FF +FR+D+E +HSRDLQ+LE +LS HL+EMEL Sbjct: 76 LRVLYPVFIHSFMDLVAEGHTQEARSFFHTFREDHELMHSRDLQKLEGILSPSHLEEMEL 135
Query: 173 ARSLRENKVNVKMCQYSFDLLLQYLHNTESTLILGIVNEHINLQVSAGQPTSWSEE 6 ARSLR+N+ +K+C+YS++LLLQYL T++ ++LGI+NE VS GQP+ S++ Sbjct: 136 ARSLRQNQFRIKLCEYSYELLLQYLQKTQALVVLGIINERTTFDVSPGQPSLISDD 191
>tr|Q67UR9|Q67UR9_ORYSJ Os06g0649500 protein OS=Oryza sativa subsp. japonica GN=P0453H04.6 PE=4 SV=1 Length = 654
Score = 151 bits (381), Expect = 2e-35 Identities = 66/116 (56%), Positives = 95/116 (81%) Frame = -3
Query: 353 LRILYPVFLHCYMDLVSKGFSQEARTFFQSFRDDYETLHSRDLQRLESVLSSDHLQEMEL 174 LR+LYPVF+H +MDLV++G +QEAR+FF +F +D+E +HSRDLQ+LE +LS HL+EMEL Sbjct: 76 LRVLYPVFIHSFMDLVAEGHTQEARSFFHTFHEDHELMHSRDLQKLEGILSPSHLEEMEL 135
Query: 173 ARSLRENKVNVKMCQYSFDLLLQYLHNTESTLILGIVNEHINLQVSAGQPTSWSEE 6 ARSLR+N+ +K+C+YS++LLLQYL T++ ++LGI+NE VS GQP+ S++ Sbjct: 136 ARSLRKNQFRIKLCEYSYELLLQYLQKTQALVVLGIINERTTFDVSPGQPSLISDD 191
>tr|B8B897|B8B897_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25319 PE=4 SV=1 Length = 631
Score = 148 bits (373), Expect = 1e-34 Identities = 67/109 (61%), Positives = 94/109 (86%) Frame = -3
Query: 353 LRILYPVFLHCYMDLVSKGFSQEARTFFQSFRDDYETLHSRDLQRLESVLSSDHLQEMEL 174 LRILYP+F HC+MDLV++G +QEA +FF +FR+D+E HSRDL++LES+LS HL++ME+ Sbjct: 88 LRILYPLFFHCFMDLVAEGHTQEACSFFHTFREDHE--HSRDLKKLESILSPLHLEQMEV 145
Query: 173 ARSLRENKVNVKMCQYSFDLLLQYLHNTESTLILGIVNEHINLQVSAGQ 27 ARSLR+NK +K+C+YS++LLLQYLH T++ ++LGI+NE I+ QVS GQ Sbjct: 146 ARSLRQNKFRIKLCEYSYELLLQYLHKTQALVVLGIINERIDFQVSPGQ 194
>tr|B7F3W6|B7F3W6_ORYSJ cDNA clone:J013072E21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 248
Score = 125 bits (315), Expect = 8e-28 Identities = 58/97 (59%), Positives = 83/97 (85%) Frame = -3
Query: 317 MDLVSKGFSQEARTFFQSFRDDYETLHSRDLQRLESVLSSDHLQEMELARSLRENKVNVK 138 MDLV++G +QEA +FF +FR+D+E HSRDL++LES+LS HL++ME+ARSLR+NK +K Sbjct: 1 MDLVAEGHTQEACSFFHTFREDHE--HSRDLKKLESILSPLHLEQMEVARSLRQNKFRIK 58
Query: 137 MCQYSFDLLLQYLHNTESTLILGIVNEHINLQVSAGQ 27 +C+YS++LLLQYLH T++ ++LGI+NE I+ QVS GQ Sbjct: 59 LCEYSYELLLQYLHKTQALVVLGIINERIDFQVSPGQ 95
>tr|A3BE39|A3BE39_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021311 PE=4 SV=1 Length = 512
Score = 113 bits (282), Expect = 5e-24 Identities = 54/116 (46%), Positives = 78/116 (67%) Frame = -3
Query: 353 LRILYPVFLHCYMDLVSKGFSQEARTFFQSFRDDYETLHSRDLQRLESVLSSDHLQEMEL 174 LR+LYPVF+H +MDLV++G +QEAR+FF +F +D+E +HSRDLQ+LE +LS HL Sbjct: 76 LRVLYPVFIHSFMDLVAEGHTQEARSFFHTFHEDHELMHSRDLQKLEGILSPSHL----- 130
Query: 173 ARSLRENKVNVKMCQYSFDLLLQYLHNTESTLILGIVNEHINLQVSAGQPTSWSEE 6 +YS++LLLQYL T++ ++LGI+NE VS GQP+ S++ Sbjct: 131 --------------EYSYELLLQYLQKTQALVVLGIINERTTFDVSPGQPSLISDD 172
>tr|Q7XB58|Q7XB58_ORYSJ Putative TATA box binding protein-associated factor (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0431A02.36 PE=4 SV=1 Length = 563
Score = 110 bits (275), Expect = 3e-23 Identities = 56/109 (51%), Positives = 77/109 (70%) Frame = -3
Query: 353 LRILYPVFLHCYMDLVSKGFSQEARTFFQSFRDDYETLHSRDLQRLESVLSSDHLQEMEL 174 LRILYP+F HC+MDLV++G +QEA +FF +FR+D+E HSRDL++LES+LS HL Sbjct: 88 LRILYPLFFHCFMDLVAEGHTQEACSFFHTFREDHE--HSRDLKKLESILSPLHL----- 140
Query: 173 ARSLRENKVNVKMCQYSFDLLLQYLHNTESTLILGIVNEHINLQVSAGQ 27 +YS++LLLQYLH T++ ++LGI+NE I+ QVS GQ Sbjct: 141 --------------EYSYELLLQYLHKTQALVVLGIINERIDFQVSPGQ 175
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