BP911739
Clone id YMU001_000008_F03
Library
Length 522
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000008_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTTAATGTTATGCAGTATGTTGCTTCCCTTAATAAAACCATATCGTGCAGGATGTACAAG
ATTCAAAACTGAGGTACGAGAGAGAGAATCTCTCACACACACATCATATGTGGGCAGTAA
AACTAGAACTAAGACAGCATTTGCCTCAATCAGTCTCATCCTCGTAGACTATACCACTCT
TCAACCTCTTCCTCCAACCATTGCTCTCTAAGCTGCCACCGCTGCTCGTAATCTGCAGCC
GTCATGTCTAGCACAGAGTCACCCAAAACCACTCTCATCAGCCCATCAAACAATCCCTGG
CACTTTGCCATTATGAGTGTGGGCTTTCGGCAAGTCAAACCACTGAGAGCTCAAATAGAA
AGTCCCAACAAGCATAGGACCATCCGCATACATTGCAAGTGGATTATCTAGATAATTTTT
CCTGTAAAATTCAGTACCCTCTTGGAGCTTTGCCTGCAGGTCTTCCAAACTTGTTTCTGC
CACACCAGTAATTTCCTAATGCAGATGAAAACGGGGTATAGA
■■Homology search results ■■ -
sp_hit_id Q7XTV3
Definition sp|Q7XTV3|WOX4_ORYSJ WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica
Align length 46
Score (bit) 30.4
E-value 5.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911739|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_F03.
(522 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7XTV3|WOX4_ORYSJ WUSCHEL-related homeobox 4 OS=Oryza sativa ... 30 5.3
sp|Q25AM2|WOX4_ORYSI WUSCHEL-related homeobox 4 OS=Oryza sativa ... 30 5.3
sp|P19423|CBEP_COXBU Surface E' protein OS=Coxiella burnetii GN=... 30 5.3

>sp|Q7XTV3|WOX4_ORYSJ WUSCHEL-related homeobox 4 OS=Oryza sativa
subsp. japonica GN=WOX4 PE=2 SV=2
Length = 236

Score = 30.4 bits (67), Expect = 5.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1

Query: 247 SSTESPKTTLISPSNNPWHFAIMSVGFRQVKPLRAQIESPNKHRTI 384
SS+ SP ISPS+ P A + F+ ++PL +I P + I
Sbjct: 17 SSSSSPAPPSISPSSIPGSAAFPAFSFKCLRPLAPKISLPEPRKMI 62


>sp|Q25AM2|WOX4_ORYSI WUSCHEL-related homeobox 4 OS=Oryza sativa
subsp. indica GN=WOX4 PE=3 SV=1
Length = 236

Score = 30.4 bits (67), Expect = 5.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1

Query: 247 SSTESPKTTLISPSNNPWHFAIMSVGFRQVKPLRAQIESPNKHRTI 384
SS+ SP ISPS+ P A + F+ ++PL +I P + I
Sbjct: 17 SSSSSPAPPSISPSSIPGSAAFPAFSFKCLRPLAPKISLPEPRKMI 62


>sp|P19423|CBEP_COXBU Surface E' protein OS=Coxiella burnetii
GN=cbbE' PE=4 SV=1
Length = 495

Score = 30.4 bits (67), Expect = 5.3
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1

Query: 495 EITGVAETSLEDLQAKLQEGTEFYRKNYL--DNPLAMYADGPMLVGTFYLSSQ 343
EI + SLE+LQA L+EG F+ K+ + + P + P L+ Y Q
Sbjct: 21 EINFTSFNSLEELQASLKEGQIFFHKSVIFEEKPESGEIYSPKLISQIYRKEQ 73


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911739|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_F03.
(522 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******