BP911750 |
Clone id |
YMU001_000008_G05 |
Library |
YMU01 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000008_G05. |
Accession |
BP911750 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3658Contig1 |
Sequence |
GGGTAGCATGGTTACCAATCTTCCAAAAAAGCCTGTTGAAATACTCTCCTCTTGCGAGCA CTTTCAAAGGATCATCCCACCGTGCCTAGCTTTGTAACTCTTCTCATAGCTGGTGGCATC TCATAGACAAACTCTACTGTGAATGATTCTTGATTAGAAGTCCCTATATATCAGACTCTA TATATGATCTTGATCCAAAATTGCCTGATAGCAGTTTAGTGCAAACAAAACTACGATATT TTGCTTGTTAAGTTACGATAGCCACTGCCCACACAGCACAAGTATAACAGTTTCCGTCGC TGGATCTGGCTTGATGCTGAACTGAACATTCAAAAACTCTTTAATTAACCTCAGCACTCG AATCGCACTGGGCGTAAGCTTCCCAACCCTGACTTTGCAAACATCCTCTGGACACAGGGC ACAAAGCAGGAAAAGTAGGCCCTGATGGGTCGAATCAACAACACCATCCTGCTTGATCTC TTCCAATAGCAGCCTTGATGCATGAGTTCCAAGGTCTTCGGGTAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9C578 |
Definition |
sp|Q9C578|RCL1_ARATH Probable RNA 3'-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana |
Align length |
93 |
Score (bit) |
107.0 |
E-value |
5.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SCL8 |
Definition |
tr|A9SCL8|A9SCL8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
86 |
Score (bit) |
121.0 |
E-value |
6.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911750|Adiantum capillus-veneris mRNA, clone: YMU001_000008_G05. (525 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SCL8|A9SCL8_PHYPA Predicted protein OS=Physcomitrella paten... 121 6e-28 tr|B4FAC1|B4FAC1_MAIZE Putative uncharacterized protein OS=Zea m... 114 3e-25 tr|A7PMM7|A7PMM7_VITVI Chromosome chr14 scaffold_21, whole genom... 117 3e-25 tr|A3APF6|A3APF6_ORYSJ Putative uncharacterized protein OS=Oryza... 108 5e-23 tr|A2XNQ7|A2XNQ7_ORYSI Putative uncharacterized protein OS=Oryza... 108 5e-23 tr|Q75LH9|Q75LH9_ORYSJ Os03g0833700 protein OS=Oryza sativa subs... 108 5e-23 tr|Q683I1|Q683I1_ARATH RNA 3'-terminal phosphate cyclase-like pr... 107 5e-22 tr|Q67XN9|Q67XN9_ARATH RNA 3'-terminal phosphate cyclase-like pr... 107 5e-22 tr|A8J7U7|A8J7U7_CHLRE RNA terminal 3' phosphate cyclase OS=Chla... 94 5e-18 tr|B7G844|B7G844_PHATR Predicted protein OS=Phaeodactylum tricor... 86 4e-17 tr|A9UXT2|A9UXT2_MONBE Predicted protein OS=Monosiga brevicollis... 86 9e-16 tr|A4S0I3|A4S0I3_OSTLU Predicted protein OS=Ostreococcus lucimar... 84 4e-15 tr|Q5VZU1|Q5VZU1_HUMAN RCL1 OS=Homo sapiens GN=RCL1 PE=2 SV=1 74 5e-12 tr|Q3THS8|Q3THS8_MOUSE Putative uncharacterized protein OS=Mus m... 74 6e-12 tr|Q5BJN0|Q5BJN0_RAT RNA terminal phosphate cyclase-like 1 OS=Ra... 73 1e-11 tr|B3RPF5|B3RPF5_TRIAD Putative uncharacterized protein OS=Trich... 72 2e-11 tr|B6PWC8|B6PWC8_BRAFL Putative uncharacterized protein OS=Branc... 67 3e-11 tr|B6MRT2|B6MRT2_BRAFL Putative uncharacterized protein OS=Branc... 65 8e-11 tr|A8Q084|A8Q084_MALGO Putative uncharacterized protein OS=Malas... 70 8e-11 tr|Q4S399|Q4S399_TETNG Chromosome 4 SCAF14752, whole genome shot... 69 1e-10 tr|Q5VZU3|Q5VZU3_HUMAN RNA terminal phosphate cyclase-like 1 (Fr... 69 1e-10 tr|Q504F0|Q504F0_DANRE RNA terminal phosphate cyclase-like 1 OS=... 66 2e-10 tr|Q6DRI3|Q6DRI3_DANRE RNA 3'-terminal phosphate cyclase-like pr... 64 5e-10 tr|Q7ZXF0|Q7ZXF0_XENLA MGC53171 protein OS=Xenopus laevis GN=rcl... 67 6e-10 tr|A4HMJ1|A4HMJ1_LEIBR RNA 3'-terminal phosphate cyclase, putati... 67 6e-10 tr|B5XBF8|B5XBF8_SALSA RNA 3-terminal phosphate cyclase-like pro... 62 2e-09 tr|Q2NLA9|Q2NLA9_XENLA MGC131049 protein OS=Xenopus laevis GN=MG... 64 4e-09 tr|A8B240|A8B240_GIALA RNA 3'-terminal phosphate cyclase-like pr... 64 4e-09 tr|Q5KDP4|Q5KDP4_CRYNE RNA-3'-phosphate cyclase, putative OS=Cry... 64 4e-09 tr|Q234Q1|Q234Q1_TETTH RNA 3'-terminal phosphate cyclase family ... 64 5e-09
>tr|A9SCL8|A9SCL8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106207 PE=4 SV=1 Length = 376
Score = 121 bits (304), Expect(2) = 6e-28 Identities = 60/86 (69%), Positives = 69/86 (80%) Frame = -1
Query: 525 LPEDLGTHASRLLLEEIKQDGVVDSTHQGLLFLLCALCPEDVCKVRVGKLTPSAIRVLRL 346 LPED+G+ A+ LLLEEI++ GVVDSTHQ LLFLLCALCPEDV K+RVGKL+P AI LR Sbjct: 280 LPEDIGSRAAMLLLEEIREGGVVDSTHQSLLFLLCALCPEDVSKIRVGKLSPHAILTLRH 339
Query: 345 IKEFLNVQFSIKPDPATETVILVLCG 268 IK L VQF+IKPDP T T+IL G Sbjct: 340 IKLILGVQFNIKPDPTTGTIILTCVG 365
Score = 25.8 bits (55), Expect(2) = 6e-28 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2
Query: 287 LYLCCVGSGYRNLTSKIS 234 + L CVGSGY+N+ K S Sbjct: 359 IILTCVGSGYKNIFRKTS 376
>tr|B4FAC1|B4FAC1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 377
Score = 114 bits (286), Expect(2) = 3e-25 Identities = 56/85 (65%), Positives = 66/85 (77%) Frame = -1
Query: 522 PEDLGTHASRLLLEEIKQDGVVDSTHQGLLFLLCALCPEDVCKVRVGKLTPSAIRVLRLI 343 PEDLG A+ +LLEE+ Q GVVDSTHQGLLF+LCALCP DV KVRVG+LTP I LR I Sbjct: 282 PEDLGVQAASMLLEEVAQGGVVDSTHQGLLFILCALCPPDVSKVRVGQLTPYGIETLRNI 341
Query: 342 KEFLNVQFSIKPDPATETVILVLCG 268 ++FL+V+F IKPDP + TV L G Sbjct: 342 RDFLDVKFIIKPDPNSNTVTLKCVG 366
Score = 23.9 bits (50), Expect(2) = 3e-25 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -2
Query: 281 LCCVGSGYRNLTSKIS 234 L CVG+G +NL KIS Sbjct: 362 LKCVGAGVKNLARKIS 377
>tr|A7PMM7|A7PMM7_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020878001 PE=4 SV=1 Length = 379
Score = 117 bits (294), Expect = 3e-25 Identities = 58/94 (61%), Positives = 74/94 (78%) Frame = -1
Query: 522 PEDLGTHASRLLLEEIKQDGVVDSTHQGLLFLLCALCPEDVCKVRVGKLTPSAIRVLRLI 343 PE++G + +LL EI+Q GVVDSTHQGLLFLLCALCP+DV K+RVGKL+P+ I LR I Sbjct: 284 PEEVGEQIASVLLGEIEQGGVVDSTHQGLLFLLCALCPQDVSKIRVGKLSPNGIETLRHI 343
Query: 342 KEFLNVQFSIKPDPATETVILVLCGQWLS*LNKQ 241 ++FL V+F IKPDP+TETVIL G L L+++ Sbjct: 344 RDFLGVKFVIKPDPSTETVILKCVGCGLKNLSRK 377
>tr|A3APF6|A3APF6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012678 PE=4 SV=1 Length = 389
Score = 108 bits (271), Expect(2) = 5e-23 Identities = 54/85 (63%), Positives = 64/85 (75%) Frame = -1
Query: 522 PEDLGTHASRLLLEEIKQDGVVDSTHQGLLFLLCALCPEDVCKVRVGKLTPSAIRVLRLI 343 PEDLG + +LLEE+ Q GVVDS HQGLLF+LCAL P DV KVRVG+LTP AI LR I Sbjct: 294 PEDLGVQVASMLLEEVAQGGVVDSAHQGLLFILCALSPPDVSKVRVGQLTPYAIETLRNI 353
Query: 342 KEFLNVQFSIKPDPATETVILVLCG 268 ++FL+V+F IKPDP + TV L G Sbjct: 354 RDFLDVKFIIKPDPNSNTVTLKCVG 378
Score = 21.9 bits (45), Expect(2) = 5e-23 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -2
Query: 281 LCCVGSGYRNLTSKIS 234 L CVG+G +NL K S Sbjct: 374 LKCVGAGVKNLARKTS 389
>tr|A2XNQ7|A2XNQ7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14199 PE=4 SV=1 Length = 389
Score = 108 bits (271), Expect(2) = 5e-23 Identities = 54/85 (63%), Positives = 64/85 (75%) Frame = -1
Query: 522 PEDLGTHASRLLLEEIKQDGVVDSTHQGLLFLLCALCPEDVCKVRVGKLTPSAIRVLRLI 343 PEDLG + +LLEE+ Q GVVDS HQGLLF+LCAL P DV KVRVG+LTP AI LR I Sbjct: 294 PEDLGVQVASMLLEEVAQGGVVDSAHQGLLFILCALSPPDVSKVRVGQLTPYAIETLRNI 353
Query: 342 KEFLNVQFSIKPDPATETVILVLCG 268 ++FL+V+F IKPDP + TV L G Sbjct: 354 RDFLDVKFIIKPDPNSNTVTLKCVG 378
Score = 21.9 bits (45), Expect(2) = 5e-23 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -2
Query: 281 LCCVGSGYRNLTSKIS 234 L CVG+G +NL K S Sbjct: 374 LKCVGAGVKNLARKTS 389
>tr|Q75LH9|Q75LH9_ORYSJ Os03g0833700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0096I06.28 PE=4 SV=1 Length = 377
Score = 108 bits (271), Expect(2) = 5e-23 Identities = 54/85 (63%), Positives = 64/85 (75%) Frame = -1
Query: 522 PEDLGTHASRLLLEEIKQDGVVDSTHQGLLFLLCALCPEDVCKVRVGKLTPSAIRVLRLI 343 PEDLG + +LLEE+ Q GVVDS HQGLLF+LCAL P DV KVRVG+LTP AI LR I Sbjct: 282 PEDLGVQVASMLLEEVAQGGVVDSAHQGLLFILCALSPPDVSKVRVGQLTPYAIETLRNI 341
Query: 342 KEFLNVQFSIKPDPATETVILVLCG 268 ++FL+V+F IKPDP + TV L G Sbjct: 342 RDFLDVKFIIKPDPNSNTVTLKCVG 366
Score = 21.9 bits (45), Expect(2) = 5e-23 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -2
Query: 281 LCCVGSGYRNLTSKIS 234 L CVG+G +NL K S Sbjct: 362 LKCVGAGVKNLARKTS 377
>tr|Q683I1|Q683I1_ARATH RNA 3'-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana GN=At5g22100 PE=2 SV=1 Length = 375
Score = 107 bits (266), Expect = 5e-22 Identities = 56/93 (60%), Positives = 68/93 (73%) Frame = -1
Query: 519 EDLGTHASRLLLEEIKQDGVVDSTHQGLLFLLCALCPEDVCKVRVGKLTPSAIRVLRLIK 340 ED G + LL+EI++ GVVDSTHQGLLFLLCAL +DV KVRVG L+P A+ LR IK Sbjct: 281 EDTGVEVASWLLQEIEKGGVVDSTHQGLLFLLCALSEQDVSKVRVGTLSPYAVETLRNIK 340
Query: 339 EFLNVQFSIKPDPATETVILVLCGQWLS*LNKQ 241 EFL V+F+IKPDP T TVIL G L L+++ Sbjct: 341 EFLGVKFAIKPDPLTGTVILKCTGSGLINLSRK 373
>tr|Q67XN9|Q67XN9_ARATH RNA 3'-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana GN=At5g22100 PE=2 SV=1 Length = 375
Score = 107 bits (266), Expect = 5e-22 Identities = 56/93 (60%), Positives = 68/93 (73%) Frame = -1
Query: 519 EDLGTHASRLLLEEIKQDGVVDSTHQGLLFLLCALCPEDVCKVRVGKLTPSAIRVLRLIK 340 ED G + LL+EI++ GVVDSTHQGLLFLLCAL +DV KVRVG L+P A+ LR IK Sbjct: 281 EDTGVEVASWLLQEIEKGGVVDSTHQGLLFLLCALSEQDVSKVRVGTLSPYAVETLRNIK 340
Query: 339 EFLNVQFSIKPDPATETVILVLCGQWLS*LNKQ 241 EFL V+F+IKPDP T TVIL G L L+++ Sbjct: 341 EFLGVKFAIKPDPLTGTVILKCTGSGLINLSRK 373
>tr|A8J7U7|A8J7U7_CHLRE RNA terminal 3' phosphate cyclase OS=Chlamydomonas reinhardtii GN=RCL1 PE=4 SV=1 Length = 370
Score = 93.6 bits (231), Expect = 5e-18 Identities = 43/86 (50%), Positives = 63/86 (73%) Frame = -1
Query: 525 LPEDLGTHASRLLLEEIKQDGVVDSTHQGLLFLLCALCPEDVCKVRVGKLTPSAIRVLRL 346 +PED+GT A++LLLEE+++ GVVD +HQGLL LLCAL PE+ +R+G LTP A+R LR Sbjct: 274 VPEDIGTTAAQLLLEEVRRGGVVDGSHQGLLLLLCALGPEEANTLRLGPLTPHAVRTLRH 333
Query: 345 IKEFLNVQFSIKPDPATETVILVLCG 268 I++F V FS++ + ++ T+ G Sbjct: 334 IRDFFGVTFSLRTERSSSTIFATCVG 359
>tr|B7G844|B7G844_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1 GN=PHATRDRAFT_22658 PE=4 SV=1 Length = 405
Score = 85.5 bits (210), Expect(2) = 4e-17 Identities = 44/86 (51%), Positives = 56/86 (65%) Frame = -1
Query: 525 LPEDLGTHASRLLLEEIKQDGVVDSTHQGLLFLLCALCPEDVCKVRVGKLTPSAIRVLRL 346 LPEDLGT S LLL EI++ G VD+ Q L L L PEDV ++RVG L+ A+ LRL Sbjct: 309 LPEDLGTRGSALLLNEIRKGGCVDTGMQSLALLWMCLSPEDVSRIRVGTLSQYAVESLRL 368
Query: 345 IKEFLNVQFSIKPDPATETVILVLCG 268 K+ V+F +KPD AT+TV+L G Sbjct: 369 FKQAFGVEFKVKPDHATKTVLLSCLG 394
Score = 25.4 bits (54), Expect(2) = 4e-17 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = -2
Query: 293 KLLYLCCVGSGYRNLT 246 K + L C+GSGYRN++ Sbjct: 386 KTVLLSCLGSGYRNMS 401
|