BP911754
Clone id YMU001_000008_G09
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000008_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GATATTACCTGCAGGTACTCAGCTACAAGCACGTCTAGTGGTAGCACACAAACAAAAACG
ATGGGCTCTACTACTACATACATGAATGCTTATGTGGTGGGGAATCTTTTGATGAGCATG
AGCATGAGAATGAGCACCTCCATCATGACACCTCGCTTGGACTCTCATCGGCACCACTTT
CTAGTAGCACATAGACCACCTTCGCACATGGAATCCCTTTCTATTTTTCATGCACTCCAC
AATCACTAGCACTTATATTCACCAGCTCATATCATCACCCTACACTTCTTACAGAGCTAG
GTCATGACACACCATTTCAGCCACCTCCTACTACACTACCATTCACAGTCGCCTTCACCA
CCTCGACATCACCCACCTTGACTAGGGTCAAGTGCTCTTGGACTCTCACACCATTACCAT
GCAGGTTTGGGAGCACACAGGCACACTCTTGTCTTTCCACTCACATCTACAACAGACCTA
CTATTCTCAAACTTCACGGATAGAGAGATTGGGGATAGA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911754|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_G09.
(519 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q9PH93
Definition tr|Q9PH93|Q9PH93_XYLFA Putative uncharacterized protein OS=Xylella fastidiosa
Align length 76
Score (bit) 35.8
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911754|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_G09.
(519 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9PH93|Q9PH93_XYLFA Putative uncharacterized protein OS=Xylel... 36 1.3
tr|A3KID7|A3KID7_STRAM Putative transcriptional regulator OS=Str... 34 3.8
tr|Q5C4F5|Q5C4F5_SCHJA SJCHGC04122 protein (Fragment) OS=Schisto... 34 5.0
tr|Q8N817|Q8N817_HUMAN cDNA FLJ40133 fis, clone TESTI2012231 OS=... 33 6.5
tr|B1Y8R1|B1Y8R1_THENV Putative uncharacterized protein OS=Therm... 33 8.5

>tr|Q9PH93|Q9PH93_XYLFA Putative uncharacterized protein OS=Xylella
fastidiosa GN=XF_0051 PE=4 SV=1
Length = 121

Score = 35.8 bits (81), Expect = 1.3
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +2

Query: 239 TITSTYIHQLISSPYTSYRARS*HTISATSYYTTIHSRLHHLDITHLD*GQVLLDSHTIT 418
T+T ++ H L S + HT++ + +T HS H L +H L SHT T
Sbjct: 9 TLTHSHTHTLTHSHTHTLTHSHTHTLTHSHTHTLTHSHTHTLTHSHT---HTLTHSHTHT 65

Query: 419 MQVWEHTGTLLSFHSH 466
+ HT TL H+H
Sbjct: 66 L-THSHTHTLTHSHTH 80


>tr|A3KID7|A3KID7_STRAM Putative transcriptional regulator
OS=Streptomyces ambofaciens ATCC 23877 GN=SAML0481 PE=4
SV=1
Length = 291

Score = 34.3 bits (77), Expect = 3.8
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2

Query: 224 FFMHSTITSTYIHQLISSPYTSYRARS*HTISATSYYTTIHSRLHHLD 367
F M+S I + Y H+L+ S + S RAR + T Y T +HS L +D
Sbjct: 193 FLMYSPIEARYFHELLISIFRSARARP----AFTQYLTQVHSMLALVD 236


>tr|Q5C4F5|Q5C4F5_SCHJA SJCHGC04122 protein (Fragment)
OS=Schistosoma japonicum PE=2 SV=2
Length = 221

Score = 33.9 bits (76), Expect = 5.0
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +2

Query: 215 PFLFFMHSTITSTYIHQLISSPYTSYRARS*HTISATSYYTTIHSRLHHLDITHLD*GQV 394
PFLFF H+T +S I + SSP T + S + I+ H+ + +
Sbjct: 44 PFLFFPHNTASSFLIDSIFSSPITVF-----------SLFVIINWLSHYFYLLCF----I 88

Query: 395 LLDSHTITMQVWEHTGTLLSFH-----SHLQQTYYSQTSRIERLGI 517
++ S +I VW+ + +++ S+++ Y+ TS + LG+
Sbjct: 89 IISSRSIRSDVWKLIRSGITYKVPFTLSNIELFVYTYTSTLYFLGL 134


>tr|Q8N817|Q8N817_HUMAN cDNA FLJ40133 fis, clone TESTI2012231
OS=Homo sapiens PE=2 SV=1
Length = 225

Score = 33.5 bits (75), Expect = 6.5
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2

Query: 149 HLAWTLIGTTF**HIDHLRTWNPFLFFMHSTITSTYIH-QLISSPYT--SYRARS*HTIS 319
H WT T H H+ ++ F H+ +TST++H L +P T ++ +++ HT+
Sbjct: 40 HTIWTHHTHTT--HTTHINSYKAFTHTTHTPLTSTHLHTPLTHTPRTHITHHSQTQHTLL 97

Query: 320 ATSYYTTIHSRLHH 361
YT H+ HH
Sbjct: 98 IHQSYT--HTPTHH 109


>tr|B1Y8R1|B1Y8R1_THENV Putative uncharacterized protein
OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM
9278 / V24Sta) GN=Tneu_1213 PE=3 SV=1
Length = 991

Score = 33.1 bits (74), Expect = 8.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3

Query: 351 AFTTSTSPTLTRVKCSWTLTPLPCRFGSTQAHSCL-STHIYNR 476
+F + P L +K +W P PCR + SC+ S H+Y++
Sbjct: 438 SFNAAVDPALREIKTAWFSPPNPCRQWPEEILSCVYSQHVYSK 480