BP911761
Clone id YMU001_000008_H06
Library
Length 520
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000008_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATCCTAAACTGGCAGCTTTGGCAAAAAGCTTTCTTCCGAAGTTTGAGACCGTGTATTACA
TTCACAATTTCAAAGGGAATCACGGTGGTACTTTGTTCAGAGCTTATCCTGGTCCATGGC
AGGTACTTCGAAGAATGAACGATGGCCTTGTTTGTGTTCATGAACAGGAGACAATGCCAA
CCCTAAAAGAGGTGGCACTAAACATTTTGATGCGGGTGTGACACAGGGTTTGCCATCACT
TGATGTAAGTTCAAGTGGATGAGTCTCTTGATCCCATGAGCCAATGTGTAATTTTAATCT
GTGATTGACTGAGGTTTTCAATTTTATCTGAAGAGCTCCGAAGAGCTTTGTCCTTACCTG
GTTGAACTGGTTCACAGCACAAGGTACAAAGTTTCATGTAAGATCTCAAAAGCTCTTATC
AAGGAAAATACCAACTAGGGCGTGTGCCGTGAGCCGGAAACATCACTTGTAACCTGAGCC
GGTACTGCGGTTACAATTTCCTGCTATAAAGAAGGGCTTC
■■Homology search results ■■ -
sp_hit_id Q1E6Q0
Definition sp|Q1E6Q0|YD156_COCIM WD repeat-containing protein CIMG_01763 OS=Coccidioides immitis
Align length 47
Score (bit) 31.2
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911761|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_H06.
(487 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1E6Q0|YD156_COCIM WD repeat-containing protein CIMG_01763 OS... 31 2.6
sp|P49397|RS3A_ORYSJ 40S ribosomal protein S3a OS=Oryza sativa s... 31 2.6
sp|P04654|CASA2_SHEEP Alpha-S2-casein OS=Ovis aries GN=CSN1S2 PE... 30 5.8
sp|Q9XEG7|RS3A_TORRU 40S ribosomal protein S3a OS=Tortula rurali... 29 9.9

>sp|Q1E6Q0|YD156_COCIM WD repeat-containing protein CIMG_01763
OS=Coccidioides immitis GN=CIMG_01763 PE=3 SV=1
Length = 525

Score = 31.2 bits (69), Expect = 2.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2

Query: 261 KLHIGSWDQETHPLELTSSDGKPCVTPASKCLVPPLLGLALSPVHEH 121
KL+ GS+D L+L S PAS PL G+ ++P H
Sbjct: 258 KLYSGSYDSSIRALDLEKSVATEAYAPASSSDDEPLSGIDMAPTDPH 304


>sp|P49397|RS3A_ORYSJ 40S ribosomal protein S3a OS=Oryza sativa
subsp. japonica GN=RPS3A PE=2 SV=2
Length = 262

Score = 31.2 bits (69), Expect = 2.6
Identities = 18/84 (21%), Positives = 37/84 (44%)
Frame = -1

Query: 334 VQPGKDKALRSSSDKIENLSQSQIKITHWLMGSRDSST*TYIK*WQTLCHTRIKMFSATS 155
+Q +D+A R + E++ + W M + +K WQTL + + +
Sbjct: 73 LQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDG 132

Query: 154 FRVGIVSCS*TQTRPSFILRSTCH 83
+ + + T+ RP+ + R TC+
Sbjct: 133 YMLRLFCIGFTKRRPNQVKR-TCY 155


>sp|P04654|CASA2_SHEEP Alpha-S2-casein OS=Ovis aries GN=CSN1S2 PE=2
SV=1
Length = 223

Score = 30.0 bits (66), Expect = 5.8
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1

Query: 361 KLCTLCCEPVQPGKDK---ALRSSSDKIENLSQSQIKIT 254
KLCT CE V D+ ++RSSS++ ++ ++KIT
Sbjct: 50 KLCTTSCEEVVRNADEEEYSIRSSSEESAEVAPEEVKIT 88


>sp|Q9XEG7|RS3A_TORRU 40S ribosomal protein S3a OS=Tortula ruralis
GN=RPS3A PE=2 SV=3
Length = 248

Score = 29.3 bits (64), Expect = 9.9
Identities = 14/76 (18%), Positives = 35/76 (46%)
Frame = -1

Query: 334 VQPGKDKALRSSSDKIENLSQSQIKITHWLMGSRDSST*TYIK*WQTLCHTRIKMFSATS 155
+Q +D+A R + E++ + W M + ++ WQ+L + + + +
Sbjct: 72 LQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDN 131

Query: 154 FRVGIVSCS*TQTRPS 107
+++ I + T+ RP+
Sbjct: 132 YQIRIFCIAFTKKRPN 147


tr_hit_id A9P1J3
Definition tr|A9P1J3|A9P1J3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 58
Score (bit) 100.0
E-value 3.0e-20
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911761|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_H06.
(487 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9P1J3|A9P1J3_PICSI Putative uncharacterized protein OS=Picea... 100 3e-20
tr|Q94F50|Q94F50_ARATH AT5g48790/K24G6_12 OS=Arabidopsis thalian... 99 1e-19
tr|A7QHE7|A7QHE7_VITVI Chromosome chr2 scaffold_97, whole genome... 97 4e-19
tr|Q7XA29|Q7XA29_SOLBU Putative uncharacterized protein OS=Solan... 95 2e-18
tr|Q0ILF9|Q0ILF9_SOLBU Putative uncharacterized protein OS=Solan... 95 2e-18
tr|B8AH08|B8AH08_ORYSI Putative uncharacterized protein OS=Oryza... 95 2e-18
tr|A3A2R7|A3A2R7_ORYSJ Putative uncharacterized protein OS=Oryza... 95 2e-18
tr|A9S8P0|A9S8P0_PHYPA Predicted protein OS=Physcomitrella paten... 91 4e-17
tr|B6UHF9|B6UHF9_MAIZE Putative uncharacterized protein OS=Zea m... 90 5e-17
tr|Q01BY6|Q01BY6_OSTTA Homology to unknown gene OS=Ostreococcus ... 61 3e-08
tr|A4RV55|A4RV55_OSTLU Predicted protein (Fragment) OS=Ostreococ... 54 3e-06
tr|Q8LFG2|Q8LFG2_ARATH Putative uncharacterized protein OS=Arabi... 45 0.001
tr|Q8H0W0|Q8H0W0_ARATH Putative uncharacterized protein At1g7306... 45 0.001
tr|A7QFZ7|A7QFZ7_VITVI Chromosome chr9 scaffold_90, whole genome... 44 0.003
tr|A4RRJ7|A4RRJ7_OSTLU Predicted protein OS=Ostreococcus lucimar... 44 0.003
tr|Q01G24|Q01G24_OSTTA Homology to unknown gene (Fragment) OS=Os... 42 0.012
tr|Q6ZGM0|Q6ZGM0_ORYSJ Os02g0117100 protein OS=Oryza sativa subs... 41 0.033
tr|B8AGH9|B8AGH9_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.033
tr|B6U605|B6U605_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.057
tr|B4FQ86|B4FQ86_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.057
tr|A9T9V2|A9T9V2_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.097
tr|A8IRG9|A8IRG9_CHLRE Predicted protein OS=Chlamydomonas reinha... 39 0.17
tr|Q2JPK7|Q2JPK7_SYNJB Putative uncharacterized protein OS=Synec... 38 0.28
tr|Q2JY66|Q2JY66_SYNJA Putative uncharacterized protein OS=Synec... 37 0.48
tr|B7GAR8|B7GAR8_PHATR Predicted protein OS=Phaeodactylum tricor... 36 0.82
tr|Q7NGC3|Q7NGC3_GLOVI Gll3249 protein OS=Gloeobacter violaceus ... 35 1.4
tr|B8BYZ5|B8BYZ5_THAPS Predicted protein OS=Thalassiosira pseudo... 35 1.4
tr|Q112U8|Q112U8_TRIEI Putative uncharacterized protein OS=Trich... 35 1.8
tr|A8XXV4|A8XXV4_CAEBR CBR-GLY-18 protein OS=Caenorhabditis brig... 35 1.8
tr|Q7NGU5|Q7NGU5_GLOVI Glr2792 protein OS=Gloeobacter violaceus ... 35 2.4

>tr|A9P1J3|A9P1J3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 337

Score = 100 bits (250), Expect = 3e-20
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +3

Query: 3 PKFETVYYIHNFKGNHGGTLFRAYPGPWQVLRRMNDGLVCVHEQETMPTLKEVALNIL 176
PK ET YYIHNFKG GGTLFR+YPGPWQVLR++ D VC+H+QETMP+LKEVAL+IL
Sbjct: 277 PKLETAYYIHNFKGRVGGTLFRSYPGPWQVLRKVGDKHVCIHQQETMPSLKEVALSIL 334


>tr|Q94F50|Q94F50_ARATH AT5g48790/K24G6_12 OS=Arabidopsis thaliana
GN=At5g48790 PE=2 SV=1
Length = 316

Score = 98.6 bits (244), Expect = 1e-19
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +3

Query: 3 PKFETVYYIHNFKGNHGGTLFRAYPGPWQVLRRMNDGLVCVHEQETMPTLKEVALNIL 176
PK ETVYYIHNFKG GG LFR YPGPWQVLRR + +CVH+QE+MP+LKEVAL+IL
Sbjct: 256 PKMETVYYIHNFKGQKGGVLFRCYPGPWQVLRRTRNKYICVHQQESMPSLKEVALDIL 313


>tr|A7QHE7|A7QHE7_VITVI Chromosome chr2 scaffold_97, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00038743001
PE=4 SV=1
Length = 322

Score = 97.1 bits (240), Expect = 4e-19
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +3

Query: 3 PKFETVYYIHNFKGNHGGTLFRAYPGPWQVLRRMNDGLVCVHEQETMPTLKEVALNIL 176
PK ETVYYIHNFKG GGTLFR YPGPW+VLR++ + +C+H+QE MP+LKEVAL+IL
Sbjct: 262 PKMETVYYIHNFKGRKGGTLFRCYPGPWKVLRKVRNEYICLHQQEVMPSLKEVALDIL 319


>tr|Q7XA29|Q7XA29_SOLBU Putative uncharacterized protein OS=Solanum
bulbocastanum GN=SBB1_14t00013 PE=4 SV=2
Length = 338

Score = 94.7 bits (234), Expect = 2e-18
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = +3

Query: 3 PKFETVYYIHNFKGNHGGTLFRAYPGPWQVLRRMNDGLVCVHEQETMPTLKEVALNIL 176
PK ETVYYIHNFKG +GG LFR YPGPW+V RR+ +C+H+QE+MP+LKEVAL+IL
Sbjct: 278 PKMETVYYIHNFKGRNGGVLFRCYPGPWKVFRRVGSTNICLHQQESMPSLKEVALDIL 335


>tr|Q0ILF9|Q0ILF9_SOLBU Putative uncharacterized protein OS=Solanum
bulbocastanum GN=SBB1_21t00009 PE=4 SV=1
Length = 338

Score = 94.7 bits (234), Expect = 2e-18
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = +3

Query: 3 PKFETVYYIHNFKGNHGGTLFRAYPGPWQVLRRMNDGLVCVHEQETMPTLKEVALNIL 176
PK ETVYYIHNFKG +GG LFR YPGPW+V RR+ +C+H+QE+MP+LKEVAL+IL
Sbjct: 278 PKMETVYYIHNFKGRNGGVLFRCYPGPWKVFRRVGSTNICLHQQESMPSLKEVALDIL 335


>tr|B8AH08|B8AH08_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_05707 PE=4 SV=1
Length = 338

Score = 94.7 bits (234), Expect = 2e-18
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +3

Query: 3 PKFETVYYIHNFKGNHGGTLFRAYPGPWQVLRRMNDGLVCVHEQETMPTLKEVALNIL 176
PK ETVYYIHNFKG GGTLFR YPGPW+VLR + C+HEQE MP+LKEVAL+IL
Sbjct: 278 PKLETVYYIHNFKGLKGGTLFRCYPGPWKVLRNIGGSFFCLHEQEEMPSLKEVALDIL 335


>tr|A3A2R7|A3A2R7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_005089 PE=4 SV=1
Length = 338

Score = 94.7 bits (234), Expect = 2e-18
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +3

Query: 3 PKFETVYYIHNFKGNHGGTLFRAYPGPWQVLRRMNDGLVCVHEQETMPTLKEVALNIL 176
PK ETVYYIHNFKG GGTLFR YPGPW+VLR + C+HEQE MP+LKEVAL+IL
Sbjct: 278 PKLETVYYIHNFKGLKGGTLFRCYPGPWKVLRNIGGSFFCLHEQEEMPSLKEVALDIL 335


>tr|A9S8P0|A9S8P0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_125880 PE=4 SV=1
Length = 280

Score = 90.5 bits (223), Expect = 4e-17
Identities = 43/59 (72%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Frame = +3

Query: 3 PKFETVYYIHNFKGNHGGTLFRAYPGPWQVLRRMND-GLVCVHEQETMPTLKEVALNIL 176
PKFETVYYIHNFKG G LFR YPGPWQVL+R+ D V +HEQ +MP+LKEVALNIL
Sbjct: 219 PKFETVYYIHNFKGRSRGVLFRMYPGPWQVLQRVGDHKFVLLHEQASMPSLKEVALNIL 277


>tr|B6UHF9|B6UHF9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 310

Score = 90.1 bits (222), Expect = 5e-17
Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +3

Query: 3 PKFETVYYIHNFKGNHGGTLFRAYPGPWQVLRRMNDG-LVCVHEQETMPTLKEVALNILM 179
PK +TVYYIHNFKG GGTLFR YP PW+VLR+ + G VC+H+QE MP+LKEVAL+IL
Sbjct: 249 PKLDTVYYIHNFKGAKGGTLFRCYPEPWKVLRKASSGSYVCLHQQEEMPSLKEVALDILP 308

Query: 180 RV 185
V
Sbjct: 309 SV 310


>tr|Q01BY6|Q01BY6_OSTTA Homology to unknown gene OS=Ostreococcus
tauri GN=Ot03g05210 PE=4 SV=1
Length = 267

Score = 60.8 bits (146), Expect = 3e-08
Identities = 33/58 (56%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3

Query: 6 KFETVYYIHNFKGNHGGTLFRAYPGPWQVLRRMNDG-LVCVHEQETMPTLKEVALNIL 176
KFE VY I+NFKG++ LFR YP PWQVLRR DG L V E ++K VAL IL
Sbjct: 206 KFEGVYVIYNFKGSNPAVLFRVYPEPWQVLRRRRDGSLERVATFEKFESVKAVALEIL 263