BP911762
Clone id YMU001_000008_H07
Library
Length 479
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000008_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATCGGGGCCTATGCAGCTCATTTTGTCCATCAGCCGAAGTAAGGCCATTGGGTCTGGTTA
GAGACCACTTTAACAGTTTAACAATATGCCATTCAGTGCATGCTCACACACGGCAGGTCT
GTTACAAGCAAGGCGGCTTATTTATCATCAAGTCACGTGTCAGCAACGTGAAGAAGCTTT
GTGTGTTGCAAAATCAAGCATGGCTATCCACAGCTCATTTGGTTGTCAACACGTTCATAG
AGTCCCATCATTGGGAATTGTTATAGGAATCAAATCCTTGGACTGCTCATGCATCAGGAC
ACCAAGAGGGCTCTCGGGGTTGTGGAGGTGAAGTGTTGGTCAACAACATTGCACATGCTT
TGTTTTGACTCAAGCACCCCCACCTTTTTTATAAGGAAAGTGCTGGACTAACTTTGACTT
CCCATTTCTATGAGAGGACTTGACTGCTTGTCATTGGCGCAGAAATGGCTTTTGTCTTA
■■Homology search results ■■ -
sp_hit_id Q8BJM3
Definition sp|Q8BJM3|GIDRP_MOUSE Growth inhibition and differentiation-related protein 88 homolog OS=Mus musculus
Align length 69
Score (bit) 33.1
E-value 0.67
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911762|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_H07.
(479 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8BJM3|GIDRP_MOUSE Growth inhibition and differentiation-rela... 33 0.67
sp|A6LQ99|G6PI_CLOB8 Glucose-6-phosphate isomerase OS=Clostridiu... 31 3.3
sp|P13376|G6PIB_BACST Glucose-6-phosphate isomerase B OS=Bacillu... 30 4.3
sp|Q62233|SIX3_MOUSE Homeobox protein SIX3 OS=Mus musculus GN=Si... 30 5.6
sp|A6TN07|G6PI_ALKMQ Glucose-6-phosphate isomerase OS=Alkaliphil... 30 5.6
sp|Q5WDX0|G6PI_BACSK Glucose-6-phosphate isomerase OS=Bacillus c... 29 9.6
sp|Q0UYL3|COG6_PHANO Conserved oligomeric Golgi complex subunit ... 29 9.6

>sp|Q8BJM3|GIDRP_MOUSE Growth inhibition and differentiation-related
protein 88 homolog OS=Mus musculus GN=Gidrp88 PE=2 SV=1
Length = 775

Score = 33.1 bits (74), Expect = 0.67
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Frame = +2

Query: 161 QQREEALCVAKSSMAIHSSFGCQHVHRVPSLGIVIGI--------KSLDCSCIRTPRGLS 316
+Q +E C K + + +H HR P GIV I K +DC ++T G +
Sbjct: 99 KQNKEKACSKKGAEESTEASSQEHQHRAPDAGIVSSIPLQRLFKPKDMDCWEVQT-AGAT 157

Query: 317 GLWR*SVGQ 343
G WR S Q
Sbjct: 158 GHWRVSPSQ 166


>sp|A6LQ99|G6PI_CLOB8 Glucose-6-phosphate isomerase OS=Clostridium
beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=pgi
PE=3 SV=1
Length = 449

Score = 30.8 bits (68), Expect = 3.3
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1

Query: 455 NDKQSSPLIEMGSQS*SSTFLIKKVGVLESKQSMCNVVDQHFTSTTP 315
+DK+ P I + SST++ + + V+E K NV+ + T+T P
Sbjct: 106 SDKRKVPQIFFAGNNISSTYMAELLQVIEGKDVSLNVISKSGTTTEP 152


>sp|P13376|G6PIB_BACST Glucose-6-phosphate isomerase B OS=Bacillus
stearothermophilus GN=pgiB PE=1 SV=1
Length = 445

Score = 30.4 bits (67), Expect = 4.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1

Query: 470 SHFCANDKQSSPLIEMGSQS*SSTFLIKKVGVLESKQSMCNVVDQHFTSTTP 315
SH N + I Q+ SST++ + VLE K NV+ + T+T P
Sbjct: 95 SHTFHNQMNDTTQIYFAGQNISSTYISHLLDVLEGKDLSINVISKSGTTTEP 146


>sp|Q62233|SIX3_MOUSE Homeobox protein SIX3 OS=Mus musculus GN=Six3
PE=2 SV=2
Length = 333

Score = 30.0 bits (66), Expect = 5.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3

Query: 204 LSTAHLVVNTFIESHHWELL*ESNPWTAHASGHQEGSRGCGG 329
L ++H ++ F +SHH LL S+ + ASG G+ G GG
Sbjct: 9 LYSSHFLLPNFADSHHCSLLLASSGGGSGASGGGGGAGGGGG 50


>sp|A6TN07|G6PI_ALKMQ Glucose-6-phosphate isomerase OS=Alkaliphilus
metalliredigens (strain QYMF) GN=pgi PE=3 SV=1
Length = 450

Score = 30.0 bits (66), Expect = 5.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1

Query: 452 DKQSSPLIEMGSQS*SSTFLIKKVGVLESKQSMCNVVDQHFTSTTP 315
DK+ P + + SST+L + ++E K NV+ + T+T P
Sbjct: 106 DKRQGPEVYFAGHNISSTYLKHLLDIIEGKDISLNVISKSGTTTEP 151


>sp|Q5WDX0|G6PI_BACSK Glucose-6-phosphate isomerase OS=Bacillus
clausii (strain KSM-K16) GN=pgi PE=3 SV=1
Length = 451

Score = 29.3 bits (64), Expect = 9.6
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = -1

Query: 452 DKQSSPLIEMGSQS*SSTFLIKKVGVLESKQSMCNVVDQHFTSTTP 315
+K+++P + Q+ SST+L + +L+ K NV+ + T+T P
Sbjct: 106 EKRNAPQVIFVGQNISSTYLSDVLDLLDGKDVSVNVISKSGTTTEP 151


>sp|Q0UYL3|COG6_PHANO Conserved oligomeric Golgi complex subunit 6
OS=Phaeosphaeria nodorum GN=COG6 PE=3 SV=1
Length = 694

Score = 29.3 bits (64), Expect = 9.6
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = -1

Query: 473 KSHFCANDKQSSPLIEMGSQS*SSTFLIKKVGVLESKQSMCNVVDQHFTSTTPRALLVS 297
+SH A +K++ P++E +T LI + +ESKQ + + HF + A +++
Sbjct: 118 RSHIAAANKETGPVLE------EATGLINQRKQVESKQQILQAFNSHFLISDEEATVLT 170


tr_hit_id A9DDI0
Definition tr|A9DDI0|A9DDI0_9RHIZ Putative uncharacterized protein OS=Hoeflea phototrophica DFL-43
Align length 16
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911762|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_H07.
(479 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9DDI0|A9DDI0_9RHIZ Putative uncharacterized protein OS=Hoefl... 33 5.4
tr|Q7MT57|Q7MT57_PORGI Putative uncharacterized protein OS=Porph... 33 7.0
tr|B2RH52|B2RH52_PORG3 Putative uncharacterized protein OS=Porph... 33 7.0
tr|Q5UNS0|Q5UNS0_PORGI FimX OS=Porphyromonas gingivalis PE=4 SV=1 33 7.0
tr|A0PA78|A0PA78_PORGI Putative uncharacterized protein OS=Porph... 33 7.0

>tr|A9DDI0|A9DDI0_9RHIZ Putative uncharacterized protein OS=Hoeflea
phototrophica DFL-43 GN=HPDFL43_03154 PE=4 SV=1
Length = 295

Score = 33.5 bits (75), Expect = 5.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3

Query: 279 WTAHASGHQEGSRGCG 326
WTAH SGH+ GS GCG
Sbjct: 75 WTAHQSGHEIGSHGCG 90


>tr|Q7MT57|Q7MT57_PORGI Putative uncharacterized protein
OS=Porphyromonas gingivalis GN=PG_2130 PE=4 SV=1
Length = 193

Score = 33.1 bits (74), Expect = 7.0
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Frame = +3

Query: 228 NTFIESHH-----WELL*ESNPWTAHA-SGHQEGSRGCGGEVLVNNIAHALF*LKHPHLF 389
N F SHH W + E WT A SGH G G GGE VN+I + LK + +
Sbjct: 62 NPFTFSHHRKLKHWLVAPELRYWTCEAFSGHFFGLHGIGGEYNVNDIDIPIGRLKKLNNY 121

Query: 390 ----YKESAGLT 413
Y AGLT
Sbjct: 122 RYEGYAIGAGLT 133


>tr|B2RH52|B2RH52_PORG3 Putative uncharacterized protein
OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM
20709 / JCM 12257) GN=PGN_0178 PE=4 SV=1
Length = 193

Score = 33.1 bits (74), Expect = 7.0
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Frame = +3

Query: 228 NTFIESHH-----WELL*ESNPWTAHA-SGHQEGSRGCGGEVLVNNIAHALF*LKHPHLF 389
N F SHH W + E WT A SGH G G GGE VN+I + LK + +
Sbjct: 62 NPFTFSHHRKLKHWLVAPELRYWTCEAFSGHFFGLHGIGGEYNVNDIDIPIGRLKKLNNY 121

Query: 390 ----YKESAGLT 413
Y AGLT
Sbjct: 122 RYEGYAIGAGLT 133


>tr|Q5UNS0|Q5UNS0_PORGI FimX OS=Porphyromonas gingivalis PE=4 SV=1
Length = 193

Score = 33.1 bits (74), Expect = 7.0
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Frame = +3

Query: 228 NTFIESHH-----WELL*ESNPWTAHA-SGHQEGSRGCGGEVLVNNIAHALF*LKHPHLF 389
N F SHH W + E WT A SGH G G GGE VN+I + LK + +
Sbjct: 62 NPFTFSHHRKLKHWLVAPELRYWTCEAFSGHFFGLHGIGGEYNVNDIDIPIGRLKKLNNY 121

Query: 390 ----YKESAGLT 413
Y AGLT
Sbjct: 122 RYEGYAIGAGLT 133


>tr|A0PA78|A0PA78_PORGI Putative uncharacterized protein
OS=Porphyromonas gingivalis PE=4 SV=1
Length = 193

Score = 33.1 bits (74), Expect = 7.0
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Frame = +3

Query: 228 NTFIESHH-----WELL*ESNPWTAHA-SGHQEGSRGCGGEVLVNNIAHALF*LKHPHLF 389
N F SHH W + E WT A SGH G G GGE VN+I + LK + +
Sbjct: 62 NPFTFSHHRKLRHWLVAPELRYWTCEAFSGHFFGLHGIGGEYNVNDIDIPIGRLKKLNNY 121

Query: 390 ----YKESAGLT 413
Y AGLT
Sbjct: 122 RYEGYAIGAGLT 133