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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911774
Clone id YMU001_000009_A08
Library
Length 453
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000009_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGGCCCTCATGATGGCGCATCAGGTGGAGATTCTGCGGCCTGAGGCAGGCTCCAAGTACG
ATGAAGCCACAATGGATACTCTTGACTCCTTATCAGGAGAGCACTTTCAGCCCATTGTTG
AATTCACCGTCTTCCCGGGGTTTAAGATCGAGGGTTCAGTAATCATCAAGTCGCAGGTGT
ATCTTCAACCAAAGTATGCTGCTGTCAGTACAGGTTGTTAATTTAAATTTCAATGCTGCG
TGCAGCCAGAGATCTGACCCATATGTTTCAAAATAAAGAGCCAATAGCCAATAGCCATAA
ATTGAAGCCATGGGTTCTGTTATTGTTGACATGGGTTGAATTCAGTTGTAAAGGTAGCCA
CGGCATATTAATTTTTTGTAACACTGGTCGCTGGTAGTTTGCTTAGAGGTAATGGAATTC
TAATGTAATGTGGCTAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q95LA1
Definition sp|Q95LA1|FMO3_CANFA Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Canis familiaris
Align length 50
Score (bit) 29.6
E-value 5.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911774|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_A08.
         (435 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q95LA1|FMO3_CANFA Dimethylaniline monooxygenase [N-oxide-form...    30   5.6  
sp|Q891H2|G6PI_CLOTE Glucose-6-phosphate isomerase OS=Clostridiu...    29   7.3  
sp|Q4WQ82|TIM54_ASPFU Mitochondrial import inner membrane transl...    29   7.5  
sp|O35379|MRP1_MOUSE Multidrug resistance-associated protein 1 O...    29   7.5  
sp|Q8HXQ5|MRP1_BOVIN Multidrug resistance-associated protein 1 O...    29   9.8  

>sp|Q95LA1|FMO3_CANFA Dimethylaniline monooxygenase
           [N-oxide-forming] 3 OS=Canis familiaris GN=FMO3 PE=2
           SV=3
          Length = 532

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +3

Query: 42  EAGSKYDEATMDTLDSLSGEHFQPIVEFTVFPGFKIEGSVIIKSQVYLQP 191
           E   K + AT D +   SG H  P +    FPG K+       S+ Y +P
Sbjct: 130 ERDGKRESATFDAVLICSGHHVYPNLPEESFPGLKLFKGKCFHSREYKEP 179


>sp|Q891H2|G6PI_CLOTE Glucose-6-phosphate isomerase OS=Clostridium
           tetani GN=pgi PE=3 SV=1
          Length = 449

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = -2

Query: 389 DQCYKKLICRGYLYN*IQPMSTIT--EPMASIYGYWLLALYFETYGSD 252
           +QCYK +  R  LYN  +    +   EP    +G W   LY E+ G +
Sbjct: 248 NQCYKYVAARNALYNKGKNTEILANFEPSLHYFGEWWKQLYGESEGKE 295


>sp|Q4WQ82|TIM54_ASPFU Mitochondrial import inner membrane
           translocase subunit tim54 OS=Aspergillus fumigatus
           GN=tim54 PE=3 SV=1
          Length = 439

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -1

Query: 84  QEYPLWLHRTWSLPQAAESPPDAPS*GP 1
           +EY   LH  W  P    SPPDAP  GP
Sbjct: 152 KEYIRGLHEGWLGPLDPPSPPDAPVKGP 179


>sp|O35379|MRP1_MOUSE Multidrug resistance-associated protein 1
           OS=Mus musculus GN=Abcc1 PE=2 SV=1
          Length = 1528

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -1

Query: 345 LNSTHVNNNRTH-GFNLWLLAIGSLF*NIWVRS 250
           +  TH+N  +T  GF LW++    LF + W RS
Sbjct: 65  IQMTHLNKTKTALGFFLWIICWADLFYSFWERS 97


>sp|Q8HXQ5|MRP1_BOVIN Multidrug resistance-associated protein 1
           OS=Bos taurus GN=ABCC1 PE=2 SV=1
          Length = 1530

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 345 LNSTHVNNNRTH-GFNLWLLAIGSLF*NIWVRSL 247
           +  TH+N  +T  GF LW++    LF + W RS+
Sbjct: 65  IQMTHLNKAKTALGFLLWIVCWADLFYSFWERSM 98
tr_hit_id B2ZAS0
Definition tr|B2ZAS0|B2ZAS0_9ROSI UNE1-like protein OS=Gossypioides kirkii
Align length 76
Score (bit) 45.1
E-value 0.002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911774|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_A08.
         (435 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2ZAS0|B2ZAS0_9ROSI UNE1-like protein OS=Gossypioides kirkii ...    45   0.002
tr|Q9LP57|Q9LP57_ARATH F28N24.3 protein OS=Arabidopsis thaliana ...    40   0.058
tr|Q8L624|Q8L624_ARATH Putative uncharacterized protein At1g2930...    40   0.058
tr|A9SHS4|A9SHS4_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.058
tr|B2ZAQ7|B2ZAQ7_GOSRA UNE1-like protein OS=Gossypium raimondii ...    40   0.076
tr|A7QDG4|A7QDG4_VITVI Chromosome chr10 scaffold_81, whole genom...    36   0.84 
tr|Q9MAG4|Q9MAG4_ARATH F12M16.27 (At1g53380) OS=Arabidopsis thal...    34   3.2  
tr|Q56W09|Q56W09_ARATH Putative uncharacterized protein At1g5338...    34   3.2  
tr|Q0WSC7|Q0WSC7_ARATH Putative uncharacterized protein At1g5338...    34   3.2  
tr|Q5F2A9|Q5F2A9_MOUSE Mannose-P-dolichol utilization defect 1 (...    33   7.1  
tr|A7PYC1|A7PYC1_VITVI Chromosome chr15 scaffold_37, whole genom...    33   7.1  
tr|B0A6W3|B0A6W3_9CLOT Putative uncharacterized protein OS=Clost...    33   9.3  
tr|Q0CU26|Q0CU26_ASPTN Putative uncharacterized protein OS=Asper...    33   9.3  

>tr|B2ZAS0|B2ZAS0_9ROSI UNE1-like protein OS=Gossypioides kirkii
           PE=4 SV=1
          Length = 439

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
 Frame = +3

Query: 6   LMMAHQVEILRPEAGSKYDEATMDTLDSLS--------GEHFQPIVEFTVFPGFKIEGSV 161
           L M+ QV + +   G ++ E  M+ +   S        G     IV FTV PGFKI G  
Sbjct: 365 LSMSDQVSVFQVMKGYRFSEVYMENVSEESLFIDEIVDGADVDVIVGFTVVPGFKI-GKT 423

Query: 162 IIKSQVYLQPKYAAVS 209
           +I+SQVYL P  + VS
Sbjct: 424 VIQSQVYLSPVISPVS 439


>tr|Q9LP57|Q9LP57_ARATH F28N24.3 protein OS=Arabidopsis thaliana
           GN=At1g29300 PE=4 SV=1
          Length = 459

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
 Frame = +3

Query: 3   ALMMAHQVEILRPEAGSKYDEATMDTLDS-----LSGEHFQPIVEFTVFPGFKIEGSVII 167
           A  ++  V + + + G ++ +  M+++ S      SG++    V FTV PGFKI G  +I
Sbjct: 387 AFSLSGNVTVFQLKRGCRFSQVYMESVKSGDESLFSGDNSDIRVGFTVVPGFKI-GENVI 445

Query: 168 KSQVYLQP 191
           +SQVYL P
Sbjct: 446 QSQVYLTP 453


>tr|Q8L624|Q8L624_ARATH Putative uncharacterized protein At1g29300
           OS=Arabidopsis thaliana GN=At1g29300 PE=2 SV=1
          Length = 459

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
 Frame = +3

Query: 3   ALMMAHQVEILRPEAGSKYDEATMDTLDS-----LSGEHFQPIVEFTVFPGFKIEGSVII 167
           A  ++  V + + + G ++ +  M+++ S      SG++    V FTV PGFKI G  +I
Sbjct: 387 AFSLSGNVTVFQLKRGCRFSQVYMESVKSGDESLFSGDNSDIRVGFTVVPGFKI-GENVI 445

Query: 168 KSQVYLQP 191
           +SQVYL P
Sbjct: 446 QSQVYLTP 453


>tr|A9SHS4|A9SHS4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_130069 PE=4 SV=1
          Length = 118

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
 Frame = +3

Query: 42  EAGSKYDEATMDTLDSLSGEHFQPIV-----EFTVFPGFKIEGSVIIKSQVYLQPKYAAV 206
           +  + +D   M+TLD L+   F   V      F V PGF + G VI KSQVYL PK   +
Sbjct: 55  KTSTAFDPKYMETLDVLTMPQFDASVFSSKVGFMVTPGFLVNGQVI-KSQVYLMPKIGLL 113

Query: 207 STGC 218
            + C
Sbjct: 114 CSPC 117


>tr|B2ZAQ7|B2ZAQ7_GOSRA UNE1-like protein OS=Gossypium raimondii
           PE=4 SV=1
          Length = 646

 Score = 39.7 bits (91), Expect = 0.076
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
 Frame = +3

Query: 6   LMMAHQVEILRPEAGSKYDEATMDTLDSLS--------GEHFQPIVEFTVFPGFKIEGSV 161
           L M+ QV + +   G ++ E  M+ +   S        G      V FTV PGFKI G  
Sbjct: 362 LSMSDQVSVFQVMKGYRFSEVYMENVSEESIFIDEIVDGADVDFRVGFTVVPGFKI-GKT 420

Query: 162 IIKSQVYLQP 191
           +I+SQVYL P
Sbjct: 421 VIQSQVYLSP 430


>tr|A7QDG4|A7QDG4_VITVI Chromosome chr10 scaffold_81, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00035829001
           PE=4 SV=1
          Length = 434

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = +3

Query: 21  QVEILRPEAGSKYDEATM-----DTLDSLSGEHFQPIVEFTVFPGFKIEGSVIIKSQVYL 185
           ++ + +    S++ E  M     D  D++ G+     V FTV PGFKI GS +++ QVYL
Sbjct: 369 EIGVFQVSHNSRFSEVYMECVTEDAFDTVDGDLR---VGFTVVPGFKI-GSTVVQCQVYL 424

Query: 186 QPKYAA 203
            P   A
Sbjct: 425 SPAATA 430


>tr|Q9MAG4|Q9MAG4_ARATH F12M16.27 (At1g53380) OS=Arabidopsis
           thaliana GN=At1g53380 PE=2 SV=1
          Length = 453

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
 Frame = +3

Query: 3   ALMMAHQVEILRPEAGSKYDEATMDTLD-------SLSGEHFQPIVEFTVFPGFKIEGSV 161
           AL    + EI R   G ++ E  M ++        + S    +P V FTV PGF+I G  
Sbjct: 384 ALSFEREAEIFRVPKGCRFSEVYMKSVAEEAFFPAAESSPESEPRVAFTVVPGFRI-GKT 442

Query: 162 IIKSQVYL 185
            I+ +VYL
Sbjct: 443 SIQCEVYL 450


>tr|Q56W09|Q56W09_ARATH Putative uncharacterized protein At1g53380
           OS=Arabidopsis thaliana GN=At1g53380 PE=4 SV=1
          Length = 81

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
 Frame = +3

Query: 3   ALMMAHQVEILRPEAGSKYDEATMDTLD-------SLSGEHFQPIVEFTVFPGFKIEGSV 161
           AL    + EI R   G ++ E  M ++        + S    +P V FTV PGF+I G  
Sbjct: 12  ALSFEREAEIFRVPKGCRFSEVYMKSVAEEAFFPAAESSPESEPRVAFTVVPGFRI-GKT 70

Query: 162 IIKSQVYL 185
            I+ +VYL
Sbjct: 71  SIQCEVYL 78


>tr|Q0WSC7|Q0WSC7_ARATH Putative uncharacterized protein At1g53380
           OS=Arabidopsis thaliana GN=At1g53380 PE=2 SV=1
          Length = 453

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
 Frame = +3

Query: 3   ALMMAHQVEILRPEAGSKYDEATMDTLD-------SLSGEHFQPIVEFTVFPGFKIEGSV 161
           AL    + EI R   G ++ E  M ++        + S    +P V FTV PGF+I G  
Sbjct: 384 ALSFEREAEIFRVPKGCRFSEVYMKSVAEEAFFPAAESSPESEPRVAFTVVPGFRI-GKT 442

Query: 162 IIKSQVYL 185
            I+ +VYL
Sbjct: 443 SIQCEVYL 450


>tr|Q5F2A9|Q5F2A9_MOUSE Mannose-P-dolichol utilization defect 1
           (Fragment) OS=Mus musculus GN=Mpdu1 PE=4 SV=1
          Length = 196

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -1

Query: 114 WAESALLIRSQEYPLWLHRTWSLPQAAES 28
           W ES+LL R  E P WL   WSL  A  S
Sbjct: 127 WPESSLLFRKLETPSWLESLWSLLSAMAS 155