BP911796 |
Clone id |
YMU001_000009_C07 |
Library |
YMU01 |
Length |
529 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000009_C07. |
Accession |
BP911796 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGATGAAGTCCGCAACGCCAGGAAAAGCGGCCAAGCCGCCCAACGGCTACCGGTTTGGCG CGCACACAACGCCCAAGTGGCTCACCATGGCCACAGAACAAGAAAGCTCTCCCTCTCCCT TTGCACATTAAAGGGATGTCACCCTTTAGGTTATATATCCTTGTTTTCTATCTTCTCCCG ACGCATGTGGGACATTCGCCATGGCACATGGCGGCCGCCCGTGACTTGCCTCTCGAGGCA CTTAAAATCAACCCAGGAAACCTCCTCATGGTGCTACTTTTAATCTGCGACAACTCTCTG CTCATGTGCTCAATGCTCGAGCCGCAAAAACTGGCCAGAATCTCCCTATGCGGACTTCAA AATCCACCATCTTGGTGGCACTCTAACTTCCCCGAACTCGCAAAACGAGGCAAAACCGGG CAAACTCCATATGGCATCTCTCTCTAGCACCAACGTCCAACTTCAATTAACCGTACAAAA ACATCACATGCCACGTCTACTGATGCGGTCAATTTGAGTACCTGCAGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P27465 |
Definition |
sp|P27465|PISD_CRIGR Phosphatidylserine decarboxylase proenzyme OS=Cricetulus griseus |
Align length |
58 |
Score (bit) |
33.1 |
E-value |
0.85 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911796|Adiantum capillus-veneris mRNA, clone: YMU001_000009_C07. (529 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P27465|PISD_CRIGR Phosphatidylserine decarboxylase proenzyme ... 33 0.85 sp|Q5R8I8|PISD_PONAB Phosphatidylserine decarboxylase proenzyme ... 32 1.9 sp|Q8BSF4|PISD_MOUSE Phosphatidylserine decarboxylase proenzyme ... 32 1.9 sp|Q9UG56|PISD_HUMAN Phosphatidylserine decarboxylase proenzyme ... 32 1.9 sp|Q58DH2|PISD_BOVIN Phosphatidylserine decarboxylase proenzyme ... 32 1.9 sp|O08919|NUMBL_MOUSE Numb-like protein OS=Mus musculus GN=Numbl... 31 3.2 sp|Q9Y6R0|NUMBL_HUMAN Numb-like protein OS=Homo sapiens GN=NUMBL... 31 3.2 sp|Q9UM22|EPDR1_HUMAN Mammalian ependymin-related protein 1 OS=H... 31 3.2 sp|Q6GLQ4|PP1RA_XENLA Serine/threonine-protein phosphatase 1 reg... 31 4.2 sp|Q9NZB2|F120A_HUMAN Constitutive coactivator of PPAR-gamma-lik... 30 5.4 sp|Q7TT18|MCAF1_MOUSE Activating transcription factor 7-interact... 30 5.5 sp|Q4R707|SPIR1_MACFA Protein spire homolog 1 OS=Macaca fascicul... 30 7.2 sp|Q08AE8|SPIR1_HUMAN Protein spire homolog 1 OS=Homo sapiens GN... 30 7.2 sp|Q6VMQ6|MCAF1_HUMAN Activating transcription factor 7-interact... 30 7.2 sp|P32618|YEF3_YEAST Uncharacterized protein YEL043W OS=Saccharo... 30 9.2 sp|A5D7V7|S46A3_BOVIN Solute carrier family 46 member 3 OS=Bos t... 30 9.2 sp|P07984|GUNA_CELFI Endoglucanase A OS=Cellulomonas fimi GN=cen... 30 9.4 sp|Q9N0C7|EPDR1_MACFA Mammalian ependymin-related protein 1 OS=M... 30 9.4
>sp|P27465|PISD_CRIGR Phosphatidylserine decarboxylase proenzyme OS=Cricetulus griseus GN=PISD PE=1 SV=2 Length = 409
Score = 33.1 bits (74), Expect = 0.85 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = +1
Query: 151 LYILVFYLLPT--HVGHSP--WHMAAARDLPLEALKINPGNLLMVLLLICDNSLLMCS 312 LY V YL P H HSP W ++ R P + +NPG + L C N ++ S Sbjct: 251 LYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNPGMARWIKELFCHNERVVLS 308
>sp|Q5R8I8|PISD_PONAB Phosphatidylserine decarboxylase proenzyme OS=Pongo abelii GN=PISD PE=2 SV=1 Length = 409
Score = 32.0 bits (71), Expect = 1.9 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Frame = +1
Query: 151 LYILVFYLLPT--HVGHSP--WHMAAARDLPLEALKINPGNLLMVLLLICDN 294 LY V YL P H HSP W ++ R P + +NPG + L C N Sbjct: 251 LYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNPGMARWIKELFCHN 302
>sp|Q8BSF4|PISD_MOUSE Phosphatidylserine decarboxylase proenzyme OS=Mus musculus GN=Pisd PE=2 SV=1 Length = 406
Score = 32.0 bits (71), Expect = 1.9 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Frame = +1
Query: 151 LYILVFYLLPT--HVGHSP--WHMAAARDLPLEALKINPGNLLMVLLLICDN 294 LY V YL P H HSP W ++ R P + +NPG + L C N Sbjct: 248 LYHCVIYLAPGDYHCFHSPTDWTISHRRHFPGSLMSVNPGMARWIKELFCHN 299
>sp|Q9UG56|PISD_HUMAN Phosphatidylserine decarboxylase proenzyme OS=Homo sapiens GN=PISD PE=2 SV=3 Length = 408
Score = 32.0 bits (71), Expect = 1.9 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Frame = +1
Query: 151 LYILVFYLLPT--HVGHSP--WHMAAARDLPLEALKINPGNLLMVLLLICDN 294 LY V YL P H HSP W ++ R P + +NPG + L C N Sbjct: 250 LYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNPGMARWIKELFCHN 301
>sp|Q58DH2|PISD_BOVIN Phosphatidylserine decarboxylase proenzyme OS=Bos taurus GN=PISD PE=2 SV=1 Length = 416
Score = 32.0 bits (71), Expect = 1.9 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Frame = +1
Query: 151 LYILVFYLLPT--HVGHSP--WHMAAARDLPLEALKINPGNLLMVLLLICDN 294 LY V YL P H HSP W ++ R P + +NPG + L C N Sbjct: 258 LYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNPGMARWIKELFCHN 309
>sp|O08919|NUMBL_MOUSE Numb-like protein OS=Mus musculus GN=Numbl PE=1 SV=2 Length = 604
Score = 31.2 bits (69), Expect = 3.2 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1
Query: 31 PSRPTATGLARTQRPSGSPWPQNKKALPLP 120 P+ P+A G RP+G+PWP P P Sbjct: 538 PAAPSAPGGQARPRPNGAPWPPEPAPAPAP 567
>sp|Q9Y6R0|NUMBL_HUMAN Numb-like protein OS=Homo sapiens GN=NUMBL PE=1 SV=1 Length = 609
Score = 31.2 bits (69), Expect = 3.2 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1
Query: 31 PSRPTATGLARTQRPSGSPWPQNKKALPLP 120 P+ P+A G RP+G+PWP P P Sbjct: 543 PAIPSAPGSQARPRPNGAPWPPEPAPAPAP 572
>sp|Q9UM22|EPDR1_HUMAN Mammalian ependymin-related protein 1 OS=Homo sapiens GN=EPDR1 PE=2 SV=2 Length = 224
Score = 31.2 bits (69), Expect = 3.2 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 8/67 (11%) Frame = +2
Query: 95 RTRKLSLSLCTLKGCHPLGY---ISLFSIFSRRMWDIRHG-----TWRPPVTCLSRHLKS 250 R+ + + + T+K C+P+ I+ I S R +DI+ G + PP TC L+ Sbjct: 158 RSYETWIGIYTVKDCYPVQETFTINYSVILSTRFFDIQLGIKDPSVFTPPSTCQMAQLEK 217
Query: 251 TQETSSW 271 E SW Sbjct: 218 MSEDCSW 224
>sp|Q6GLQ4|PP1RA_XENLA Serine/threonine-protein phosphatase 1 regulatory subunit 10 OS=Xenopus laevis GN=ppp1r10 PE=2 SV=1 Length = 819
Score = 30.8 bits (68), Expect = 4.2 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2
Query: 359 KIHHLGGTLTSPNSQNEAKPGKLHMASLSSTNVQLQLTVQKHHMP 493 KI HL G+L + N QN+ PG S N+ QK+H P Sbjct: 602 KIKHLLGSLQNQN-QNQGPPGPAGQGSQGPVNIGFPPPSQKNHQP 645
>sp|Q9NZB2|F120A_HUMAN Constitutive coactivator of PPAR-gamma-like protein 1 OS=Homo sapiens GN=FAM120A PE=1 SV=2 Length = 1118
Score = 30.4 bits (67), Expect = 5.4 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Frame = -3
Query: 122 KGRGRAFL-FCGHGEPLGRCVRAKPVAVGRLGRFSWRCG 9 +GRGR F CG G P G V P R+ S CG Sbjct: 882 QGRGRGFAGVCGFGGPYGETVATGPYRAFRVAAASGHCG 920
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O13155 |
Definition |
tr|O13155|O13155_CHICK Smooth muscle protein phosphatase type 1-binding subunit OS=Gallus gallus |
Align length |
84 |
Score (bit) |
35.4 |
E-value |
1.8 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911796|Adiantum capillus-veneris mRNA, clone: YMU001_000009_C07. (529 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|O13155|O13155_CHICK Smooth muscle protein phosphatase type 1-... 35 1.8 tr|Q175Q9|Q175Q9_AEDAE Nuclear transcription factor, x-box bindi... 35 2.3 tr|A8DCU1|A8DCU1_GIBMO Putative sugar transporter OS=Gibberella ... 35 2.4 tr|Q4S353|Q4S353_TETNG Chromosome 4 SCAF14752, whole genome shot... 34 5.3 tr|B0C4Y2|B0C4Y2_ACAM1 Putative uncharacterized protein OS=Acary... 34 5.3 tr|A0DZS5|A0DZS5_PARTE Chromosome undetermined scaffold_70, whol... 33 6.9 tr|B2HP56|B2HP56_MYCMM Primosomal protein N' PriA OS=Mycobacteri... 33 8.8 tr|A0PPK4|A0PPK4_MYCUA Primosomal protein N' PriA OS=Mycobacteri... 33 8.8 tr|B3UY10|B3UY10_9BETA M84 OS=Muromegalovirus C4A GN=M84 PE=4 SV=1 33 9.0 tr|B3V4Z5|B3V4Z5_SALMI 3-hydroxy-3-methylglutaryl-coenzyme A red... 33 9.0
>tr|O13155|O13155_CHICK Smooth muscle protein phosphatase type 1-binding subunit OS=Gallus gallus PE=2 SV=1 Length = 288
Score = 35.4 bits (80), Expect = 1.8 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = +2
Query: 248 STQETSSWCYF*SATTLCSCAQCSSRKNWPESPYADFKIHHLGGTLTSPNSQNEAKPGKL 427 S + SS C AT C +C + +W + ++KI+H+G T + ++ AK + Sbjct: 204 SLPKPSSSC---KATEFCISFRCGQKTHWDNNQGKNYKIYHVGVTRSPSHAVKSAKGARE 260
Query: 428 HM-ASLSSTNVQLQLTVQKHHMPR 496 H+ S ++ V L +H P+ Sbjct: 261 HLGTSRAAALVLSHLQSWRHSEPQ 284
>tr|Q175Q9|Q175Q9_AEDAE Nuclear transcription factor, x-box binding 1 (Nfx1) OS=Aedes aegypti GN=AAEL006574 PE=4 SV=1 Length = 799
Score = 35.0 bits (79), Expect = 2.3 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Frame = -3
Query: 230 GKSRAAAMCH-GECPTCVGRR*KTRIYNL-----KGDIPLMCKGRGRAFLFCGHGEPLGR 69 GK + +MCH G C C ++ I L + +P+ C G GH + L Sbjct: 488 GKHKCTSMCHQGPCYPC-NQKATVEIKQLPHPQCEVKVPVTCIG--------GHEKSLWP 538
Query: 68 CVRAKPVAVGRLGRFSWRCGLH 3 C +KP + GR + RCG+H Sbjct: 539 CYNSKPTSCGRECGRALRCGVH 560
>tr|A8DCU1|A8DCU1_GIBMO Putative sugar transporter OS=Gibberella moniliformis GN=FST3 PE=3 SV=1 Length = 517
Score = 35.0 bits (79), Expect = 2.4 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +2
Query: 29 GQAAQRLPVWRAHNAQVAHHGHRTRKLSLSLCTLKGCHPLGYISLFSIFSRRMWDIRHG- 205 GQ + +PVW++ + + G + L +C LGY+ L S + ++ HG Sbjct: 136 GQLSSIVPVWQSETSAAVNRGRQVVLTGLFIC-------LGYV-LESWINLGFFEFHHGP 187
Query: 206 -TWRPPV 223 TWRPP+ Sbjct: 188 VTWRPPI 194
>tr|Q4S353|Q4S353_TETNG Chromosome 4 SCAF14752, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00024788001 PE=4 SV=1 Length = 537
Score = 33.9 bits (76), Expect = 5.3 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 8/76 (10%) Frame = +1
Query: 91 PQNKKALPLPLHIKGM---SPFR-LYILVFYLLPT--HVGHSP--WHMAAARDLPLEALK 246 PQN++ P + + SP L+ +V YL P H HSP W + R P + Sbjct: 301 PQNRRGADSPASFRDLLLSSPDSDLFHMVVYLAPGDYHCFHSPTDWKVELRRHFPGSLMS 360
Query: 247 INPGNLLMVLLLICDN 294 +NPG +V L C N Sbjct: 361 VNPGVARLVKELFCLN 376
>tr|B0C4Y2|B0C4Y2_ACAM1 Putative uncharacterized protein OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_6188 PE=4 SV=1 Length = 128
Score = 33.9 bits (76), Expect = 5.3 Identities = 19/46 (41%), Positives = 26/46 (56%) Frame = +1
Query: 13 QRQEKRPSRPTATGLARTQRPSGSPWPQNKKALPLPLHIKGMSPFR 150 +R+E++P R T T Q P + P N KAL P H+K +PFR Sbjct: 61 EREEQKPQRFTLTVAHLDQDPQNNH-PDNLKALCAPCHLKFDAPFR 105
>tr|A0DZS5|A0DZS5_PARTE Chromosome undetermined scaffold_70, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00021710001 PE=4 SV=1 Length = 2418
Score = 33.5 bits (75), Expect = 6.9 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +1
Query: 13 QRQEKRPSRPTATGLARTQRPSGSPWPQNKKALPL 117 Q+Q+++P PT A Q+P+ P PQ K LPL Sbjct: 395 QQQQQKPLAPTQQQPASQQQPASQPQPQQKLQLPL 429
>tr|B2HP56|B2HP56_MYCMM Primosomal protein N' PriA OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=priA PE=4 SV=1 Length = 648
Score = 33.1 bits (74), Expect = 8.8 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Frame = -3
Query: 263 RFPGLILSASRGKSRAAAMCHGECP--------TCVGRR*KTRIYNLKGDIPLMCKGR-G 111 R P + L A+R +A A + P C R R + G + L +G G Sbjct: 334 RLPSIALHAARSSLQAGAPVLVQVPRRGYVPSLACGRCRAIARCRHCTGPLSLPERGAPG 393
Query: 110 RAFLFCGHGEPLGRCVR 60 +CGHGEPL RC R Sbjct: 394 AVCRWCGHGEPLLRCTR 410
>tr|A0PPK4|A0PPK4_MYCUA Primosomal protein N' PriA OS=Mycobacterium ulcerans (strain Agy99) GN=priA PE=4 SV=1 Length = 648
Score = 33.1 bits (74), Expect = 8.8 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Frame = -3
Query: 263 RFPGLILSASRGKSRAAAMCHGECP--------TCVGRR*KTRIYNLKGDIPLMCKGR-G 111 R P + L A+R +A A + P C R R + G + L +G G Sbjct: 334 RLPSIALHAARSSLQAGAPVLVQVPRRGYVPSLACGRCRAIARCRHCTGPLSLPERGAPG 393
Query: 110 RAFLFCGHGEPLGRCVR 60 +CGHGEPL RC R Sbjct: 394 AVCRWCGHGEPLLRCTR 410
>tr|B3UY10|B3UY10_9BETA M84 OS=Muromegalovirus C4A GN=M84 PE=4 SV=1 Length = 587
Score = 33.1 bits (74), Expect = 9.0 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 8/102 (7%) Frame = +1
Query: 235 EALKINPGNL------LMVLLLICDNSLLMCSMLEPQKLARISLCGLQNPPSWWHSNF-- 390 EAL+I P L+ +LL C N + P+K+ R S L +P WHS Sbjct: 466 EALEIVPTGAVFKLKQLIPILLHCKNRDSPITRGPPKKIGRASAASLPSPR--WHSELCV 523
Query: 391 PELAKRGKTGQTPYGISL*HQRPTSINRTKTSHATSTDAVNL 516 L T Q PYG S ++ +T H S + L Sbjct: 524 GTLVGTAPTSQAPYGHSPPFSNILALQAQRTKHYQSPPQLQL 565
>tr|B3V4Z5|B3V4Z5_SALMI 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Salvia miltiorrhiza PE=2 SV=1 Length = 565
Score = 33.1 bits (74), Expect = 9.0 Identities = 21/56 (37%), Positives = 27/56 (48%) Frame = +1
Query: 10 PQRQEKRPSRPTATGLARTQRPSGSPWPQNKKALPLPLHIKGMSPFRLYILVFYLL 177 P R PS T+T A +PS P+ ALPLPL++ F L+ V Y L Sbjct: 7 PARPPPPPSASTSTSSAVDHQPSS---PKASDALPLPLYLTNGIFFTLFFSVAYFL 59
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